BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009601
         (555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39176.3| unnamed protein product [Vitis vinifera]              113   2e-23
ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containi...   113   2e-23
emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]   113   2e-23
ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containi...   100   2e-19
ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containi...   100   3e-19

>emb|CBI39176.3| unnamed protein product [Vitis vinifera]
          Length = 996

 Score =  113 bits (282), Expect = 2e-23
 Identities = 58/102 (56%), Positives = 72/102 (70%)
 Frame = -2

Query: 308 FLHKTLPFCSKFLRHFRGSLNQSLVIEVLKLVGNSRMAVTFFIWAAAQIGYTHTERAYEA 129
           F HKT     KFLR FR  LN++LV++VL LV N  + V FFIWA  QIGY HT   Y A
Sbjct: 112 FGHKT----QKFLRQFREKLNETLVVDVLSLVKNPELGVKFFIWAGRQIGYGHTGPVYHA 167

Query: 128 LLEILESNGDNTRLPDSFLQEIRNDDTQVLAKLLNVLIQKCC 3
           LLE+L   G N R+P+ FL+EIR++D ++L KLLNVLI+KCC
Sbjct: 168 LLEVLGCGG-NDRVPEQFLREIRDEDKEILGKLLNVLIRKCC 208


>ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Vitis vinifera]
          Length = 1045

 Score =  113 bits (282), Expect = 2e-23
 Identities = 58/102 (56%), Positives = 72/102 (70%)
 Frame = -2

Query: 308 FLHKTLPFCSKFLRHFRGSLNQSLVIEVLKLVGNSRMAVTFFIWAAAQIGYTHTERAYEA 129
           F HKT     KFLR FR  LN++LV++VL LV N  + V FFIWA  QIGY HT   Y A
Sbjct: 112 FGHKT----QKFLRQFREKLNETLVVDVLSLVKNPELGVKFFIWAGRQIGYGHTGPVYHA 167

Query: 128 LLEILESNGDNTRLPDSFLQEIRNDDTQVLAKLLNVLIQKCC 3
           LLE+L   G N R+P+ FL+EIR++D ++L KLLNVLI+KCC
Sbjct: 168 LLEVLGCGG-NDRVPEQFLREIRDEDKEILGKLLNVLIRKCC 208


>emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
          Length = 1010

 Score =  113 bits (282), Expect = 2e-23
 Identities = 58/102 (56%), Positives = 72/102 (70%)
 Frame = -2

Query: 308 FLHKTLPFCSKFLRHFRGSLNQSLVIEVLKLVGNSRMAVTFFIWAAAQIGYTHTERAYEA 129
           F HKT     KFLR FR  LN++LV++VL LV N  + V FFIWA  QIGY HT   Y A
Sbjct: 112 FGHKT----QKFLRQFREKLNETLVVDVLSLVKNPELGVKFFIWAGRQIGYGHTGPVYHA 167

Query: 128 LLEILESNGDNTRLPDSFLQEIRNDDTQVLAKLLNVLIQKCC 3
           LLE+L   G N R+P+ FL+EIR++D ++L KLLNVLI+KCC
Sbjct: 168 LLEVLGCGG-NDRVPEQFLREIRDEDKEILGKLLNVLIRKCC 208


>ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Glycine max]
          Length = 1024

 Score =  100 bits (249), Expect = 2e-19
 Identities = 49/92 (53%), Positives = 65/92 (70%), Gaps = 1/92 (1%)
 Frame = -2

Query: 275 FLRHFRGSLNQSLVIEVLKLVGNSRMAVTFFIWAAAQIGYTHTERAYEALLEILESNG-D 99
           FLR FRG L++ LV+EV+ LV +    V FF+WA+ QIGY+HT   Y AL+E+L  N  +
Sbjct: 90  FLRQFRGRLSEPLVVEVMNLVKHPEFCVEFFLWASRQIGYSHTPVVYNALIELLCCNAVN 149

Query: 98  NTRLPDSFLQEIRNDDTQVLAKLLNVLIQKCC 3
           N R+   FL +IR+DD ++L KLLN LIQKCC
Sbjct: 150 NDRVSHKFLMQIRDDDRELLRKLLNFLIQKCC 181


>ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 48/90 (53%), Positives = 61/90 (67%)
 Frame = -2

Query: 272 LRHFRGSLNQSLVIEVLKLVGNSRMAVTFFIWAAAQIGYTHTERAYEALLEILESNGDNT 93
           LR FR  LN  LV+E+L  + +  + V FF+WA  QIGY HT   Y ALL++ E  G   
Sbjct: 129 LRQFRQKLNPDLVVEILSFLKSPELCVKFFLWAGRQIGYDHTPAVYIALLDVFE-RGSYD 187

Query: 92  RLPDSFLQEIRNDDTQVLAKLLNVLIQKCC 3
           R+P+ FL+EIR DD +VL KLLNVLI+KCC
Sbjct: 188 RVPEEFLREIRGDDKEVLGKLLNVLIRKCC 217