BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009597
         (210 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containi...    82   3e-14
ref|XP_002514843.1| pentatricopeptide repeat-containing protein,...    79   5e-13
ref|XP_002309562.1| predicted protein [Populus trichocarpa] gi|2...    78   8e-13
ref|XP_003588999.1| Pentatricopeptide repeat-containing protein ...    77   1e-12
ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containi...    77   2e-12

>ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 35/68 (51%), Positives = 51/68 (75%)
 Frame = -2

Query: 206 LTPNVITYTSLICGLCGSGRWKESMHLFGKMLAQNVTPNVITFNILVDALCKQGRTEDAF 27
           +TP VI+YTSLI G C  G+W+E+  LF +M+ Q V PNV+TFN+L+D LCK+G+  +A 
Sbjct: 273 MTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAK 332

Query: 26  EVFQVMSQ 3
           ++ +VM Q
Sbjct: 333 DLLEVMIQ 340


>ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545894|gb|EEF47397.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 594

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 36/68 (52%), Positives = 50/68 (73%)
 Frame = -2

Query: 206 LTPNVITYTSLICGLCGSGRWKESMHLFGKMLAQNVTPNVITFNILVDALCKQGRTEDAF 27
           ++P V+TY SLI G+C SG+WK++  LF +ML  N+ P+V+TF+ILVDALCK+G   +A 
Sbjct: 275 ISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEAL 334

Query: 26  EVFQVMSQ 3
            VF  M Q
Sbjct: 335 SVFGKMIQ 342



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 29/66 (43%), Positives = 46/66 (69%)
 Frame = -2

Query: 206 LTPNVITYTSLICGLCGSGRWKESMHLFGKMLAQNVTPNVITFNILVDALCKQGRTEDAF 27
           + P+++TY+SLI G+C S  WKES  L  +ML++N+ P+V+TF+I VD  CK+G   +A 
Sbjct: 345 MEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQ 404

Query: 26  EVFQVM 9
            +  +M
Sbjct: 405 SIINLM 410



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 27/68 (39%), Positives = 43/68 (63%)
 Frame = -2

Query: 206 LTPNVITYTSLICGLCGSGRWKESMHLFGKMLAQNVTPNVITFNILVDALCKQGRTEDAF 27
           LTPN IT+T+LI GLC +GR   +  LF KM +    P++IT++ L+   CK G  ++A 
Sbjct: 485 LTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEAL 544

Query: 26  EVFQVMSQ 3
            +F+ + +
Sbjct: 545 ALFEALKK 552



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/67 (37%), Positives = 41/67 (61%)
 Frame = -2

Query: 206 LTPNVITYTSLICGLCGSGRWKESMHLFGKMLAQNVTPNVITFNILVDALCKQGRTEDAF 27
           L PNV+TY SL+ G C   +  E+  +F  M+ +   P+V+++NIL+   CK  R ++A 
Sbjct: 415 LRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAK 474

Query: 26  EVFQVMS 6
           ++F  MS
Sbjct: 475 QLFDEMS 481


>ref|XP_002309562.1| predicted protein [Populus trichocarpa] gi|222855538|gb|EEE93085.1|
           predicted protein [Populus trichocarpa]
          Length = 590

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 32/68 (47%), Positives = 49/68 (72%)
 Frame = -2

Query: 206 LTPNVITYTSLICGLCGSGRWKESMHLFGKMLAQNVTPNVITFNILVDALCKQGRTEDAF 27
           ++P++ TY SLI GLC   RWKE+  L  +M + N+ PN+ TFN+LVDA+CK+G+  +A 
Sbjct: 266 ISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQ 325

Query: 26  EVFQVMSQ 3
            VF+ M++
Sbjct: 326 GVFKTMTE 333



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 28/64 (43%), Positives = 38/64 (59%)
 Frame = -2

Query: 200 PNVITYTSLICGLCGSGRWKESMHLFGKMLAQNVTPNVITFNILVDALCKQGRTEDAFEV 21
           P V TYT++I GLC  G    +  LF KM      PNV+T+NIL+D+LCK     +A ++
Sbjct: 198 PTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDI 257

Query: 20  FQVM 9
           F  M
Sbjct: 258 FSYM 261



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 27/66 (40%), Positives = 42/66 (63%)
 Frame = -2

Query: 206 LTPNVITYTSLICGLCGSGRWKESMHLFGKMLAQNVTPNVITFNILVDALCKQGRTEDAF 27
           LTP+ + Y +LI GLC  GR +E+  LF  M +    P++ T+++L+D  CK+G    AF
Sbjct: 406 LTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAF 465

Query: 26  EVFQVM 9
            +F+VM
Sbjct: 466 RLFRVM 471


>ref|XP_003588999.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355478047|gb|AES59250.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 458

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 34/68 (50%), Positives = 50/68 (73%)
 Frame = -2

Query: 206 LTPNVITYTSLICGLCGSGRWKESMHLFGKMLAQNVTPNVITFNILVDALCKQGRTEDAF 27
           ++PNV+TYT+LI G C  G+ +E++ LF KM+++N+ PNV TFN LVDA CK+G+ E+A 
Sbjct: 203 ISPNVVTYTALIDGFCVVGKLEEALGLFKKMISENINPNVYTFNGLVDAFCKEGKIEEAK 262

Query: 26  EVFQVMSQ 3
            V   M +
Sbjct: 263 NVLNTMME 270


>ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
           gi|297735515|emb|CBI17955.3| unnamed protein product
           [Vitis vinifera]
          Length = 627

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 31/68 (45%), Positives = 52/68 (76%)
 Frame = -2

Query: 206 LTPNVITYTSLICGLCGSGRWKESMHLFGKMLAQNVTPNVITFNILVDALCKQGRTEDAF 27
           ++P+V+ Y+S+I G+C +GRW+ +  LF +M+ + V PNV+TFN+L+DALCK G+ E+A 
Sbjct: 269 ISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEAN 328

Query: 26  EVFQVMSQ 3
            + ++M Q
Sbjct: 329 HLLKLMIQ 336



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 26/66 (39%), Positives = 42/66 (63%)
 Frame = -2

Query: 206 LTPNVITYTSLICGLCGSGRWKESMHLFGKMLAQNVTPNVITFNILVDALCKQGRTEDAF 27
           + P VITY +L+ GL   G+ +++ +LFG+M   ++TP   T+NIL+D LCK     +A 
Sbjct: 409 IMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAM 468

Query: 26  EVFQVM 9
           E+F  +
Sbjct: 469 ELFHYL 474



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 25/64 (39%), Positives = 41/64 (64%)
 Frame = -2

Query: 200 PNVITYTSLICGLCGSGRWKESMHLFGKMLAQNVTPNVITFNILVDALCKQGRTEDAFEV 21
           PNV+T+  LI  LC +G+ +E+ HL   M+ +  +P+  T+N L+D  C +GR +DA ++
Sbjct: 306 PNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDL 365

Query: 20  FQVM 9
           F  M
Sbjct: 366 FVSM 369



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 27/68 (39%), Positives = 40/68 (58%)
 Frame = -2

Query: 206 LTPNVITYTSLICGLCGSGRWKESMHLFGKMLAQNVTPNVITFNILVDALCKQGRTEDAF 27
           L PNVITYT +I GLC SG+ + +  LF  M  +   PN++TFN L+   C+    +   
Sbjct: 514 LEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVV 573

Query: 26  EVFQVMSQ 3
           E+ Q M++
Sbjct: 574 ELLQEMAE 581