BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009592
         (2428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27227.3| unnamed protein product [Vitis vinifera]              771   0.0  
ref|XP_002275643.2| PREDICTED: DNA polymerase eta [Vitis vinifera]    765   0.0  
ref|XP_003532665.1| PREDICTED: DNA polymerase eta-like [Glycine ...   745   0.0  
ref|XP_003638302.1| DNA polymerase eta [Medicago truncatula] gi|...   685   0.0  
ref|NP_568638.2| DNA polymerase eta subunit [Arabidopsis thalian...   685   0.0  

>emb|CBI27227.3| unnamed protein product [Vitis vinifera]
          Length = 773

 Score =  771 bits (1992), Expect = 0.0
 Identities = 405/694 (58%), Positives = 495/694 (71%), Gaps = 4/694 (0%)
 Frame = +1

Query: 100  MPISRPEPSDARVIAHVDMDCFYVQVEQRKQPELRGLPTAVIQYNAWKGGGLIAVGYEAR 279
            MP+++PE SDAR+IAH+DMDCFYVQVEQRKQP+LRGLPTAV+QYN+WKGGGLIAV YEAR
Sbjct: 1    MPVAKPESSDARIIAHIDMDCFYVQVEQRKQPDLRGLPTAVVQYNSWKGGGLIAVSYEAR 60

Query: 280  SFGVKRSMRGDEAKNACPQIHLVQVPVARNKADLSIYRNAGSEVVAILSHRGRCERASID 459
             FGVKRSMRGDEAK  CPQI LVQVPVAR KADL++YRNAGSEVV+IL+ +GRCERASID
Sbjct: 61   KFGVKRSMRGDEAKQVCPQIQLVQVPVARGKADLNVYRNAGSEVVSILARKGRCERASID 120

Query: 460  EVYLDLTDAAETMLSENPPEKLEAIDEEVLKSHVLGINENGNKKRENAREWICSSNTNHN 639
            EVYLDLTDAAE ML+E PPE LEAIDEE LKSHVLG+NE GN  +E+ R W+C S  +H 
Sbjct: 121  EVYLDLTDAAEAMLAEMPPESLEAIDEEALKSHVLGLNEGGNDIKESVRVWLCRSQADHR 180

Query: 640  DKLLACGAIIVAELRMQVLKETEFTCSAGIAHNKMLAKLASSMNKPAQQTVVPFSAVTEL 819
            DKLLACGA+IVAELRMQV +ETEFTCSAGIAHNKMLAKLAS+MNKPAQQT+VP S V  L
Sbjct: 181  DKLLACGALIVAELRMQVFRETEFTCSAGIAHNKMLAKLASAMNKPAQQTIVPLSCVRGL 240

Query: 820  LASLPIKKMKQLGGKLGSSVQTDLGVNSVGDLLQFSEDYLQERYGVNTGTWLWNTARGVN 999
            L SLPIKKMKQLGGKLGSS+Q+DLGVN+VGDLLQFSE+ LQE YG+NTGTWLWN ARG++
Sbjct: 241  LGSLPIKKMKQLGGKLGSSLQSDLGVNTVGDLLQFSEEKLQECYGINTGTWLWNIARGIS 300

Query: 1000 GDEVEGRLLPKSHGSGKTFPGPQALKTITSVECWLNNLCEELSERIQSDLDQNNRVAHTL 1179
            G+EVE RLL KSHGSGKTFPGP+ALKTI SVE WLN LCEEL ER++SDL+QN R+AHTL
Sbjct: 301  GEEVESRLLSKSHGSGKTFPGPKALKTIASVENWLNELCEELDERLRSDLEQNKRIAHTL 360

Query: 1180 TLNARVYKTNXXXXXXXXXXXXCPLRYGTAKIQEDALKLFNSGLREFLGSYRAETSGNQN 1359
            TL+AR YK+N            CPLRYG AKIQEDAL LF +GLRE+LGS + +T  NQ 
Sbjct: 361  TLHARAYKSNDSDSHKKFPSKSCPLRYGIAKIQEDALNLFQAGLREYLGSCKVKTRANQC 420

Query: 1360 NKWGVTSLSVTAGKILATPPGTCSIMKYFHGKEPSCSLEEHICNETTQETQPASHSGTES 1539
            + W +T+LSV+A KI+A P GTCSIMKYFHG++ S S  +   + +T+E    SHSG+ES
Sbjct: 421  SGWSITALSVSASKIVAIPTGTCSIMKYFHGQDLSSSSLKQPQDRSTEEAASLSHSGSES 480

Query: 1540 CSGGNATVLPKESSCKETKTNFSKFDLDRDGRTMDKLNSKGSSSILRFFHSRDPSCSSAE 1719
              G N     K+   +ET+ N+   +LD+  +       +G+ SILRFF   +P+ S +E
Sbjct: 481  YLGLNPRETQKQFPGEETRINYDMPNLDQQEKKRKMWEDQGTPSILRFFKRHNPTSSLSE 540

Query: 1720 QACSGIIRDGEQFFPSG----SNICRELNQAEVQKTAVNSATHGLHQGEPKRGTSSILKF 1887
            Q     I+D +    SG    S  C E  Q ++ K  + + T    +   +R +S+  + 
Sbjct: 541  QEQVEPIQDTKVSSSSGLWTTSESCSETGQIQLPKEMMVAET----ESNARRDSSAAKR- 595

Query: 1888 FXXXXXXXXXXXHVHDGILQDXXXXXXXXXXXXXRNPGEPKEGSEQGETRIHSSKRSLDQ 2067
                         V D +  +                  PKE     ET  ++ + S   
Sbjct: 596  -NDGYKIDDIDCSVMDELPPEIQEEVQARSSEDLNQVQLPKE-MMVAETESNARRDS--- 650

Query: 2068 HEQGEQNWSFNVEDIDPSVIDELPPEFQDEVRGW 2169
                ++N  + ++DID SV+DEL PE Q+EV+ W
Sbjct: 651  -SAAKRNDGYKIDDIDCSVMDELSPEIQEEVQAW 683



 Score = 97.8 bits (242), Expect = 1e-17
 Identities = 93/332 (28%), Positives = 141/332 (42%), Gaps = 13/332 (3%)
 Frame = +1

Query: 1279 EDALKLFNSGLREFLGSYRAETS----GNQNN-KWGVTSLSVTAGKI-LATPPGTCSIMK 1440
            E+A  L +SG   +LG    ET     G +    + + +L     K  +    GT SI++
Sbjct: 468  EEAASLSHSGSESYLGLNPRETQKQFPGEETRINYDMPNLDQQEKKRKMWEDQGTPSILR 527

Query: 1441 YFHGKEPSCSLEEHICNETTQETQPASHSG----TESCSGGNATVLPKESSCKETKTNF- 1605
            +F    P+ SL E    E  Q+T+ +S SG    +ESCS      LPKE    ET++N  
Sbjct: 528  FFKRHNPTSSLSEQEQVEPIQDTKVSSSSGLWTTSESCSETGQIQLPKEMMVAETESNAR 587

Query: 1606 --SKFDLDRDGRTMDKLNSKGSSSILRFFHSRDPSCSSAEQACSGIIRDGEQFFPSGSNI 1779
              S      DG  +D ++      +        P      QA S                
Sbjct: 588  RDSSAAKRNDGYKIDDIDCSVMDEL-------PPEIQEEVQARSS--------------- 625

Query: 1780 CRELNQAEVQKTAVNSATHGLHQGEPKRGTSSILKFFXXXXXXXXXXXHVHDGILQDXXX 1959
              +LNQ ++ K  + + T    +   +R +S+  +              V D +  +   
Sbjct: 626  -EDLNQVQLPKEMMVAET----ESNARRDSSAAKR--NDGYKIDDIDCSVMDELSPEIQE 678

Query: 1960 XXXXXXXXXXRNPGEPKEGSEQGETRIHSSKRSLDQHEQGEQNWSFNVEDIDPSVIDELP 2139
                           PKE +   ET  +  + SL    +  + WS+ +++IDPSV+DELP
Sbjct: 679  EVQAWSSEELNQVQLPKE-TMAAETGPNDRRCSLGGGAERRETWSYKIDEIDPSVMDELP 737

Query: 2140 PEFQDEVRGWIKPPKRANTVKRGSSIAHYFLP 2235
            PE + EV+ W++P K A T KRGSSIAHYF P
Sbjct: 738  PEIRAEVQAWLRPQKPAKTGKRGSSIAHYFSP 769


>ref|XP_002275643.2| PREDICTED: DNA polymerase eta [Vitis vinifera]
          Length = 779

 Score =  765 bits (1975), Expect = 0.0
 Identities = 405/700 (57%), Positives = 495/700 (70%), Gaps = 10/700 (1%)
 Frame = +1

Query: 100  MPISRPEPSDARVIAHVDMDCFYVQVEQRKQPELRGLPTAVIQYNAWKGGGLIAVGYEAR 279
            MP+++PE SDAR+IAH+DMDCFYVQVEQRKQP+LRGLPTAV+QYN+WKGGGLIAV YEAR
Sbjct: 1    MPVAKPESSDARIIAHIDMDCFYVQVEQRKQPDLRGLPTAVVQYNSWKGGGLIAVSYEAR 60

Query: 280  SFGVKRSMRGDEAKNACPQIHLVQVPVARNKADLSIYRNAGSEVVAILSHRGRCERASID 459
             FGVKRSMRGDEAK  CPQI LVQVPVAR KADL++YRNAGSEVV+IL+ +GRCERASID
Sbjct: 61   KFGVKRSMRGDEAKQVCPQIQLVQVPVARGKADLNVYRNAGSEVVSILARKGRCERASID 120

Query: 460  EVYLDLTDAAETMLSENPPEKLEAIDEEVLKSHVLGINENGNKKRENAREWICSSNTNHN 639
            EVYLDLTDAAE ML+E PPE LEAIDEE LKSHVLG+NE GN  +E+ R W+C S  +H 
Sbjct: 121  EVYLDLTDAAEAMLAEMPPESLEAIDEEALKSHVLGLNEGGNDIKESVRVWLCRSQADHR 180

Query: 640  DKLLACGAIIVAELRMQVLKETEFTCSAGIAHNKMLAKLASSMNKPAQQTVVPFSAVTEL 819
            DKLLACGA+IVAELRMQV +ETEFTCSAGIAHNKMLAKLAS+MNKPAQQT+VP S V  L
Sbjct: 181  DKLLACGALIVAELRMQVFRETEFTCSAGIAHNKMLAKLASAMNKPAQQTIVPLSCVRGL 240

Query: 820  LASLPIKKMKQLGGKLGSSVQTDLGVNSVGDLLQFSEDYLQERYGVNTGTWLWNTARGVN 999
            L SLPIKKMKQLGGKLGSS+Q+DLGVN+VGDLLQFSE+ LQE YG+NTGTWLWN ARG++
Sbjct: 241  LGSLPIKKMKQLGGKLGSSLQSDLGVNTVGDLLQFSEEKLQECYGINTGTWLWNIARGIS 300

Query: 1000 GDEVEGRLLPKSHGSGKTFPGPQALKTITSVECWLNNLCEELSERIQSDLDQNNRVAHTL 1179
            G+EVE RLL KSHGSGKTFPGP+ALKTI SVE WLN LCEEL ER++SDL+QN R+AHTL
Sbjct: 301  GEEVESRLLSKSHGSGKTFPGPKALKTIASVENWLNELCEELDERLRSDLEQNKRIAHTL 360

Query: 1180 TLNARVYKTNXXXXXXXXXXXXCPLRYGTAKIQEDALKLFNSGLREFLGSYRAETSGNQN 1359
            TL+AR YK+N            CPLRYG AKIQEDAL LF +GLRE+LGS + +T  NQ 
Sbjct: 361  TLHARAYKSNDSDSHKKFPSKSCPLRYGIAKIQEDALNLFQAGLREYLGSCKVKTRANQC 420

Query: 1360 NKWGVTSLSVTAGKILATPPGTCSIMKYFHGKEPSCSLEEHICNETTQETQPASH----- 1524
            + W +T+LSV+A KI+A P GTCSIMKYFHG++ S S  +   + +T+E    SH     
Sbjct: 421  SGWSITALSVSASKIVAIPTGTCSIMKYFHGQDLSSSSLKQPQDRSTEEAASLSHSDWGV 480

Query: 1525 -SGTESCSGGNATVLPKESSCKETKTNFSKFDLDRDGRTMDKLNSKGSSSILRFFHSRDP 1701
             SG+ES  G N     K+   +ET+ N+   +LD+  +       +G+ SILRFF   +P
Sbjct: 481  YSGSESYLGLNPRETQKQFPGEETRINYDMPNLDQQEKKRKMWEDQGTPSILRFFKRHNP 540

Query: 1702 SCSSAEQACSGIIRDGEQFFPSG----SNICRELNQAEVQKTAVNSATHGLHQGEPKRGT 1869
            + S +EQ     I+D +    SG    S  C E  Q ++ K  + + T    +   +R +
Sbjct: 541  TSSLSEQEQVEPIQDTKVSSSSGLWTTSESCSETGQIQLPKEMMVAET----ESNARRDS 596

Query: 1870 SSILKFFXXXXXXXXXXXHVHDGILQDXXXXXXXXXXXXXRNPGEPKEGSEQGETRIHSS 2049
            S+  +              V D +  +                  PKE     ET  ++ 
Sbjct: 597  SAAKR--NDGYKIDDIDCSVMDELPPEIQEEVQARSSEDLNQVQLPKE-MMVAETESNAR 653

Query: 2050 KRSLDQHEQGEQNWSFNVEDIDPSVIDELPPEFQDEVRGW 2169
            + S       ++N  + ++DID SV+DEL PE Q+EV+ W
Sbjct: 654  RDS----SAAKRNDGYKIDDIDCSVMDELSPEIQEEVQAW 689



 Score = 96.3 bits (238), Expect = 3e-17
 Identities = 81/279 (29%), Positives = 121/279 (43%), Gaps = 7/279 (2%)
 Frame = +1

Query: 1420 GTCSIMKYFHGKEPSCSLEEHICNETTQETQPASHSG----TESCSGGNATVLPKESSCK 1587
            GT SI+++F    P+ SL E    E  Q+T+ +S SG    +ESCS      LPKE    
Sbjct: 527  GTPSILRFFKRHNPTSSLSEQEQVEPIQDTKVSSSSGLWTTSESCSETGQIQLPKEMMVA 586

Query: 1588 ETKTNF---SKFDLDRDGRTMDKLNSKGSSSILRFFHSRDPSCSSAEQACSGIIRDGEQF 1758
            ET++N    S      DG  +D ++      +        P      QA S         
Sbjct: 587  ETESNARRDSSAAKRNDGYKIDDIDCSVMDEL-------PPEIQEEVQARSS-------- 631

Query: 1759 FPSGSNICRELNQAEVQKTAVNSATHGLHQGEPKRGTSSILKFFXXXXXXXXXXXHVHDG 1938
                     +LNQ ++ K  + + T    +   +R +S+  +              V D 
Sbjct: 632  --------EDLNQVQLPKEMMVAET----ESNARRDSSAAKR--NDGYKIDDIDCSVMDE 677

Query: 1939 ILQDXXXXXXXXXXXXXRNPGEPKEGSEQGETRIHSSKRSLDQHEQGEQNWSFNVEDIDP 2118
            +  +                  PKE +   ET  +  + SL    +  + WS+ +++IDP
Sbjct: 678  LSPEIQEEVQAWSSEELNQVQLPKE-TMAAETGPNDRRCSLGGGAERRETWSYKIDEIDP 736

Query: 2119 SVIDELPPEFQDEVRGWIKPPKRANTVKRGSSIAHYFLP 2235
            SV+DELPPE + EV+ W++P K A T KRGSSIAHYF P
Sbjct: 737  SVMDELPPEIRAEVQAWLRPQKPAKTGKRGSSIAHYFSP 775


>ref|XP_003532665.1| PREDICTED: DNA polymerase eta-like [Glycine max]
          Length = 703

 Score =  745 bits (1923), Expect = 0.0
 Identities = 402/724 (55%), Positives = 496/724 (68%), Gaps = 12/724 (1%)
 Frame = +1

Query: 100  MPISRPEPSDARVIAHVDMDCFYVQVEQRKQPELRGLPTAVIQYNAWKGGGLIAVGYEAR 279
            MP++R E  D RVIAHVDMDCFYVQVEQRKQP LRGLP+AVIQYN++KGG LIAV YEAR
Sbjct: 1    MPVARRETCDGRVIAHVDMDCFYVQVEQRKQPNLRGLPSAVIQYNSYKGGALIAVSYEAR 60

Query: 280  SFGVKRSMRGDEAKNACPQIHLVQVPVARNKADLSIYRNAGSEVVAILSHRGRCERASID 459
              GVKRSMRGDEAK ACPQI LVQVPVAR KADL+ YRNAGSEVV++LS +GRCERASID
Sbjct: 61   RCGVKRSMRGDEAKEACPQIQLVQVPVARGKADLNSYRNAGSEVVSVLSQKGRCERASID 120

Query: 460  EVYLDLTDAAETMLSENPPEKLEAIDEEVLKSHVLGIN-ENGNKKRENAREWICSSNTNH 636
            EVYLDLT AAETML E P + ++  ++EVLKSHVLG+  ++G+  ++  R+W+C S+ ++
Sbjct: 121  EVYLDLTHAAETMLMETPLDSMQDFEDEVLKSHVLGLEIKDGSDAKDEVRKWLCRSDASY 180

Query: 637  NDKLLACGAIIVAELRMQVLKETEFTCSAGIAHNKMLAKLASSMNKPAQQTVVPFSAVTE 816
             DKLLACGA+IV +LRM+VLKETEFTCSAGIAHNKMLAKLAS+MNKPAQQTVVP S+V  
Sbjct: 181  QDKLLACGALIVCDLRMKVLKETEFTCSAGIAHNKMLAKLASAMNKPAQQTVVPQSSVEG 240

Query: 817  LLASLPIKKMKQLGGKLGSSVQTDLGVNSVGDLLQFSEDYLQERYGVNTGTWLWNTARGV 996
            LLASLPIKKMK LGGKLGSS+Q+DLGVN+VGDLLQFSE+ LQ+ YG+NTGTWLWN ARG+
Sbjct: 241  LLASLPIKKMKHLGGKLGSSLQSDLGVNTVGDLLQFSEEKLQQWYGINTGTWLWNIARGI 300

Query: 997  NGDEVEGRLLPKSHGSGKTFPGPQALKTITSVECWLNNLCEELSERIQSDLDQNNRVAHT 1176
            +G+EVEGRLLPKSHGSGKTFPGPQALKT+ SV+ WLN LCEEL+ER+ SDLDQN R+A T
Sbjct: 301  SGEEVEGRLLPKSHGSGKTFPGPQALKTVDSVQHWLNQLCEELNERLHSDLDQNKRIAQT 360

Query: 1177 LTLNARVYKTNXXXXXXXXXXXXCPLRYGTAKIQEDALKLFNSGLREFLGSYRAETSGNQ 1356
            LTL+AR YKT             CPLRYGT KIQEDAL LF +GLR+FLG Y  +  GN+
Sbjct: 361  LTLHARAYKTGDSDSHRKFPSKSCPLRYGTRKIQEDALILFQAGLRDFLGFYNCKAHGNE 420

Query: 1357 NNKWGVTSLSVTAGKILATPPGTCSIMKYFHGKEPSCSLEEHICNETTQETQPASHSGTE 1536
            NN WGVTSLSV+A K+++ P GT SI+KYF G  PS S      +    E  P+S SG+ 
Sbjct: 421  NNNWGVTSLSVSASKLVSIPSGTHSIVKYFGGSFPSSSTSNQSLDVVIDEAAPSSPSGSG 480

Query: 1537 SCSGGNATVLPKESSCKETKTNFSKFDLDRDGRTMDKLNSKGSSSILRFFHSRDPSCSSA 1716
            +CSG    ++P E            F+L+    T      K S + L     +DP C  +
Sbjct: 481  NCSG----LVPNE------------FELEYPEDT----GMKDSKACL---DQQDPLCHLS 517

Query: 1717 EQACSGIIRDGEQFFPSGS-------NICRELNQAEVQKTAVNSATHGLHQ----GEPKR 1863
             +A  G+  +     PSGS          R+L   ++++ +  S+   + +    G+  +
Sbjct: 518  CKA-DGLTEESSLVSPSGSEDRILHNEPHRDLPATDLRRVSNISSLKAVGKKKTAGKKLQ 576

Query: 1864 GTSSILKFFXXXXXXXXXXXHVHDGILQDXXXXXXXXXXXXXRNPGEPKEGSEQGETRIH 2043
            G  SI+ FF             +  I                     P E   + E   +
Sbjct: 577  GNCSIVHFFNNYHNSQSSLEQKNVKISSSLGSHSADNSHSTCIQVEMPAEHPHE-EFDTN 635

Query: 2044 SSKRSLDQHEQGEQNWSFNVEDIDPSVIDELPPEFQDEVRGWIKPPKRANTVKRGSSIAH 2223
             S+ S+    QG Q+WS+N+ +IDPS+I+ELPPE Q E + W++P KR N  KRGSSI H
Sbjct: 636  KSRCSVGNMPQGRQDWSYNINEIDPSIINELPPEIQQEFQIWLRPHKRPNVAKRGSSITH 695

Query: 2224 YFLP 2235
            YF P
Sbjct: 696  YFSP 699


>ref|XP_003638302.1| DNA polymerase eta [Medicago truncatula] gi|355504237|gb|AES85440.1|
            DNA polymerase eta [Medicago truncatula]
          Length = 543

 Score =  685 bits (1768), Expect = 0.0
 Identities = 348/510 (68%), Positives = 405/510 (79%), Gaps = 1/510 (0%)
 Frame = +1

Query: 100  MPISRPEPSDARVIAHVDMDCFYVQVEQRKQPELRGLPTAVIQYNAWKGGGLIAVGYEAR 279
            M + R E  D RVIAHVDMDCFYVQVEQRKQP LRGLPTAV+QYN++KGGGLIAV YEAR
Sbjct: 1    MRVGRRESCDGRVIAHVDMDCFYVQVEQRKQPSLRGLPTAVVQYNSYKGGGLIAVSYEAR 60

Query: 280  SFGVKRSMRGDEAKNACPQIHLVQVPVARNKADLSIYRNAGSEVVAILSHRGRCERASID 459
              GVKRSMRGDEAK ACPQI LVQVPVAR KA+L+ YRNAGSEVV+ILS +GRCERASID
Sbjct: 61   KSGVKRSMRGDEAKEACPQIQLVQVPVARGKANLNTYRNAGSEVVSILSRKGRCERASID 120

Query: 460  EVYLDLTDAAETMLSENPPEKLEAIDEEVLKSHVLGIN-ENGNKKRENAREWICSSNTNH 636
            EVYLDLTDAA+TML E PPE +E ++EEVLKSHVLG+  ++G+  +E  R+WIC S+ ++
Sbjct: 121  EVYLDLTDAAQTMLMETPPECVEHVEEEVLKSHVLGLQIKDGDDAKEEVRKWICRSDASY 180

Query: 637  NDKLLACGAIIVAELRMQVLKETEFTCSAGIAHNKMLAKLASSMNKPAQQTVVPFSAVTE 816
             +KLLACGA IVAELRMQVLKETEFTCSAGIAHNKMLAKLAS+MNKPAQQTVVP S+V  
Sbjct: 181  QEKLLACGAFIVAELRMQVLKETEFTCSAGIAHNKMLAKLASAMNKPAQQTVVPHSSVEG 240

Query: 817  LLASLPIKKMKQLGGKLGSSVQTDLGVNSVGDLLQFSEDYLQERYGVNTGTWLWNTARGV 996
            LL S PIKKMKQLGGKLG+S+Q+DLG+N+VGDLLQFSE+ LQ+RYG+NTGTWLWN ARG+
Sbjct: 241  LLESFPIKKMKQLGGKLGTSLQSDLGINTVGDLLQFSEEKLQQRYGINTGTWLWNIARGI 300

Query: 997  NGDEVEGRLLPKSHGSGKTFPGPQALKTITSVECWLNNLCEELSERIQSDLDQNNRVAHT 1176
            +G+EVEGRLLPKSHGSGKTFPGPQALKTI SV+ WLN L EELSER+ SD+DQN R+AHT
Sbjct: 301  SGEEVEGRLLPKSHGSGKTFPGPQALKTIASVQHWLNELGEELSERLDSDMDQNKRIAHT 360

Query: 1177 LTLNARVYKTNXXXXXXXXXXXXCPLRYGTAKIQEDALKLFNSGLREFLGSYRAETSGNQ 1356
            LTL+AR YK              CPLRYGT KIQEDAL LF SGLR+FLG Y ++T+G++
Sbjct: 361  LTLHARAYKKGDSDSHKKFPSKSCPLRYGTTKIQEDALTLFQSGLRDFLGLYNSKTNGSE 420

Query: 1357 NNKWGVTSLSVTAGKILATPPGTCSIMKYFHGKEPSCSLEEHICNETTQETQPASHSGTE 1536
             NKWG+T+LSV+A KI+  P GT SI KYF    P  S      +    E  P+S SG+E
Sbjct: 421  -NKWGITALSVSASKIVPIPSGTHSITKYFSETFPHGSSSNQSVDNVIDEVAPSSPSGSE 479

Query: 1537 SCSGGNATVLPKESSCKETKTNFSKFDLDR 1626
            +C G     L  E   ++T  N  K  LD+
Sbjct: 480  NCMGVIPNELQLECPEEDTGVNHPKACLDQ 509


>ref|NP_568638.2| DNA polymerase eta subunit [Arabidopsis thaliana]
            gi|23954185|emb|CAC94893.1| putative DNA polymerase eta
            [Arabidopsis thaliana] gi|332007772|gb|AED95155.1| DNA
            polymerase eta subunit [Arabidopsis thaliana]
          Length = 672

 Score =  685 bits (1767), Expect = 0.0
 Identities = 375/720 (52%), Positives = 472/720 (65%), Gaps = 8/720 (1%)
 Frame = +1

Query: 100  MPISRPEPSDARVIAHVDMDCFYVQVEQRKQPELRGLPTAVIQYNAWKGGGLIAVGYEAR 279
            MP++RPE SDARVIAHVDMDCFYVQVEQRKQPELRGLP+AV+QYN W+GGGLIAV YEAR
Sbjct: 1    MPVARPEASDARVIAHVDMDCFYVQVEQRKQPELRGLPSAVVQYNEWQGGGLIAVSYEAR 60

Query: 280  SFGVKRSMRGDEAKNACPQIHLVQVPVARNKADLSIYRNAGSEVVAILSHRGRCERASID 459
              GVKRSMRGDEAK ACPQI LVQVPVAR KADL++YR+AGSEVV+IL+  G+CERASID
Sbjct: 61   KCGVKRSMRGDEAKAACPQIQLVQVPVARGKADLNLYRSAGSEVVSILAKSGKCERASID 120

Query: 460  EVYLDLTDAAETMLSENPPEKLEAIDEEVLKSHVLGIN-ENGNKKRENAREWICSSNTNH 636
            EVYLDLTDAAE+ML++ PPE LE IDEEVLKSH+LG+N E+G+  +E+ R WIC  + + 
Sbjct: 121  EVYLDLTDAAESMLADAPPESLELIDEEVLKSHILGMNREDGDDFKESVRNWICREDADR 180

Query: 637  NDKLLACGAIIVAELRMQVLKETEFTCSAGIAHNKMLAKLASSMNKPAQQTVVPFSAVTE 816
             DKLL+CG IIVAELR QVLKETEFTCSAGIAHNKMLAKLAS MNKPAQQTVVP++AV E
Sbjct: 181  RDKLLSCGIIIVAELRKQVLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTVVPYAAVQE 240

Query: 817  LLASLPIKKMKQLGGKLGSSVQTDLGVNSVGDLLQFSEDYLQERYGVNTGTWLWNTARGV 996
            LL+SLPIKKMKQLGGKLG+S+QTDLGV++VGDLLQFSE  LQE YGVNTGTWLWN ARG+
Sbjct: 241  LLSSLPIKKMKQLGGKLGTSLQTDLGVDTVGDLLQFSETKLQEHYGVNTGTWLWNIARGI 300

Query: 997  NGDEVEGRLLPKSHGSGKTFPGPQALKTITSVECWLNNLCEELSERIQSDLDQNNRVAHT 1176
            +G+EV+GRLLPKSHGSGKTFPGP+ALK++++V+ WLN L EELSER+ SDL+QN R+A T
Sbjct: 301  SGEEVQGRLLPKSHGSGKTFPGPRALKSLSTVQHWLNQLSEELSERLGSDLEQNKRIAST 360

Query: 1177 LTLNARVYKTNXXXXXXXXXXXXCPLRYGTAKIQEDALKLFNSGLREFLGSYRAETSGNQ 1356
            LTL+A  +++             CP+RYG  KIQEDA  LF + LRE++GS+  +  GN+
Sbjct: 361  LTLHASAFRSKDSDSHKKFPSKSCPMRYGVTKIQEDAFNLFQAALREYMGSFGIKPQGNK 420

Query: 1357 NNKWGVTSLSVTAGKILATPPGTCSIMKYFHGKEPSCSLEEHICNETTQETQPASHSGTE 1536
               W +T LSV+A KI+  P GT SIM+YF  +    S     C    Q     + S +E
Sbjct: 421  LETWRITGLSVSASKIVDIPSGTSSIMRYFQSQPTVPSRSADGC---VQGNVAMTASASE 477

Query: 1537 SCSGGNATVLPKESSCKETKTNFSKFDLDRDGRTMDKLNSKGSSSILRFFHSRDPSCSSA 1716
             CS   +T         +T   ++  + +   + +D ++ K   S         PS  + 
Sbjct: 478  GCSEQRSTETQAAMPEVDTGVTYTLPNFENQDKDIDLVSEKDVVSC--------PSNEAT 529

Query: 1717 EQACSGIIRDGEQFFPSGSNICRELNQAEVQKTAVNSATHGLHQGEPKRGTSSILKFFXX 1896
            + +       G Q       I R++N ++                E  RG  SI+  F  
Sbjct: 530  DVSTQSESNKGTQ----TKKIGRKMNNSK----------------EKNRGMPSIVDIFKN 569

Query: 1897 XXXXXXXXXHVHDGILQDXXXXXXXXXXXXXRNPGEPKEGSEQGE--TRIHSSKRSLDQH 2070
                        +                           S++ +  +  H+S+ + +  
Sbjct: 570  YNATPPSKQETQE--------------------DSTVSSASKRAKLSSSSHNSQVNQEVE 609

Query: 2071 EQGEQNWSFNVEDIDPSVIDELPPEFQDEVRGWIKPPKRANTVK-----RGSSIAHYFLP 2235
            E  E +W +  ++ID SV DELP E Q E+R +++  K+ NT K       SSIAHYF P
Sbjct: 610  ESRETDWGYKTDEIDQSVFDELPVEIQRELRSFLRTNKQFNTGKSKGDGSTSSIAHYFPP 669