BLASTX nr result

ID: Coptis23_contig00009588 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009588
         (1384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263790.1| PREDICTED: protein midA homolog [Vitis vinif...   669   0.0  
ref|XP_002298698.1| predicted protein [Populus trichocarpa] gi|2...   659   0.0  
ref|XP_002518105.1| conserved hypothetical protein [Ricinus comm...   641   0.0  
ref|XP_003547338.1| PREDICTED: uncharacterized protein LOC100799...   640   0.0  
ref|XP_002889527.1| hypothetical protein ARALYDRAFT_470475 [Arab...   616   e-174

>ref|XP_002263790.1| PREDICTED: protein midA homolog [Vitis vinifera]
          Length = 450

 Score =  669 bits (1725), Expect = 0.0
 Identities = 313/410 (76%), Positives = 363/410 (88%)
 Frame = +1

Query: 97   FFSTSIVGEKPILVRDFIQSALYDPEHGYFSQRSGSVGLLEKSIKFNQLEGRRAYMRYLD 276
            FFST IVG++P+LVRDFI SALYDP HGYFS RSGSVG+LE+SIKFN+L+GR+AYM+YL+
Sbjct: 34   FFSTHIVGDRPVLVRDFIWSALYDPNHGYFSHRSGSVGMLEESIKFNRLQGRKAYMKYLE 93

Query: 277  DIYKKNDIAWFTPVELFKPWYAHGIAEAIMRTANFSVPLKIYEIGGGSGTCAKCIMDYIL 456
             IY +NDIAWFTPVELFKPWYA+GIAEAI+RTA+ SVPLKIYEIGGGSGTCAK IMDY++
Sbjct: 94   GIYSQNDIAWFTPVELFKPWYAYGIAEAILRTADLSVPLKIYEIGGGSGTCAKGIMDYLM 153

Query: 457  LNAPERVYKNMTYTSVEISSSLAKKQIETVGEIRSHLSRFKVECRDAADRSGWGDVDQQP 636
            LNAP RVY +M+Y SVEISSSLAKKQ+ETVG +RSHLS+F+VEC DAAD++ WG +DQQP
Sbjct: 154  LNAPARVYNSMSYISVEISSSLAKKQMETVGAVRSHLSKFRVECHDAADKNAWGSIDQQP 213

Query: 637  CWVIMLEVLDNLPHDLIYSENQVSPWLEVWLEREHDSAHAFEVYKSVQDPFISRCIEIID 816
            CWVIMLEVLDNLPHDLIYSENQ SPW+EVW+E++H+     E+YK +QDP I RC+EIID
Sbjct: 214  CWVIMLEVLDNLPHDLIYSENQASPWMEVWVEKQHNRVALSELYKPLQDPLIKRCVEIID 273

Query: 817  LDQDHSKMGSSVVSAARSIWSKVFPKPRKSWLPTGCLKLLEVLHGALPKMSLIASDFNYL 996
            L++DH+  G + +SAAR IWSKVFPKPR+ WLPTGCLKLLEVLHGALPKMSLIASDF+YL
Sbjct: 274  LEKDHNTQGRA-ISAARHIWSKVFPKPRRCWLPTGCLKLLEVLHGALPKMSLIASDFSYL 332

Query: 997  PDVRIPGDRAPLVSTKKDGKSTDLRSYLDVKGDSDIFFPTDFWLLERIDHYCSGSVSQWK 1176
            PDVRIPG+RAPLVSTKKDG S+D  SYLD KGD+DIFFPTDFWLLER+DH+CSG +   +
Sbjct: 333  PDVRIPGERAPLVSTKKDGSSSDHSSYLDAKGDADIFFPTDFWLLERMDHFCSGWLKACE 392

Query: 1177 DKSSKPGKKRRTIRLGTDQFMEEFGLPSKTRTKDGYNPLLDDFTNTKYLM 1326
             KSSK G+KRR I L T  FMEEFGLPSKTRTKDGYNPLLDDF NTK+ +
Sbjct: 393  YKSSKQGRKRRIITLDTSSFMEEFGLPSKTRTKDGYNPLLDDFKNTKFYL 442


>ref|XP_002298698.1| predicted protein [Populus trichocarpa] gi|222845956|gb|EEE83503.1|
            predicted protein [Populus trichocarpa]
          Length = 432

 Score =  659 bits (1700), Expect = 0.0
 Identities = 309/409 (75%), Positives = 357/409 (87%)
 Frame = +1

Query: 100  FSTSIVGEKPILVRDFIQSALYDPEHGYFSQRSGSVGLLEKSIKFNQLEGRRAYMRYLDD 279
            FST+IVGEKP+LVRDFI SALYDP+HGYFSQRS SVG+LE+SI+FNQLEGR+AYM +LD 
Sbjct: 22   FSTNIVGEKPVLVRDFIHSALYDPKHGYFSQRSRSVGVLERSIRFNQLEGRKAYMNHLDK 81

Query: 280  IYKKNDIAWFTPVELFKPWYAHGIAEAIMRTANFSVPLKIYEIGGGSGTCAKCIMDYILL 459
            IYK++DI+WFTPVELFKPWYAHGIAEAIMRT+  SVPL+IYEIGGGSG CAK I+DYI+L
Sbjct: 82   IYKRSDISWFTPVELFKPWYAHGIAEAIMRTSQLSVPLQIYEIGGGSGICAKGILDYIML 141

Query: 460  NAPERVYKNMTYTSVEISSSLAKKQIETVGEIRSHLSRFKVECRDAADRSGWGDVDQQPC 639
            NAP R+Y NMTYTSVEIS SLA+ Q ETVGE+RSHLS+F+VECRDAADRSGWGD+ QQPC
Sbjct: 142  NAPARIYNNMTYTSVEISPSLAEIQKETVGEVRSHLSKFRVECRDAADRSGWGDIKQQPC 201

Query: 640  WVIMLEVLDNLPHDLIYSENQVSPWLEVWLEREHDSAHAFEVYKSVQDPFISRCIEIIDL 819
            WVIMLEVLDNLPHDL+YSENQV PW EVW+E++HD    FE+YK ++DP I RC+EI++L
Sbjct: 202  WVIMLEVLDNLPHDLVYSENQVFPWKEVWVEKQHDKESLFELYKPLEDPLIKRCVEIVEL 261

Query: 820  DQDHSKMGSSVVSAARSIWSKVFPKPRKSWLPTGCLKLLEVLHGALPKMSLIASDFNYLP 999
            D++ S      VS A+S+WSKVFPKPR+ WLPTGCLKLL+VLH  LP+MSLIASDF+YLP
Sbjct: 262  DKNQS------VSIAKSVWSKVFPKPRRCWLPTGCLKLLDVLHEVLPRMSLIASDFSYLP 315

Query: 1000 DVRIPGDRAPLVSTKKDGKSTDLRSYLDVKGDSDIFFPTDFWLLERIDHYCSGSVSQWKD 1179
            DV IPG+RAPLVSTKKDG+S D  SYLD KGD+DIFFPTDFWLLER+DHYCSG +    D
Sbjct: 316  DVSIPGERAPLVSTKKDGRSLDYNSYLDTKGDADIFFPTDFWLLERMDHYCSGWMKPHGD 375

Query: 1180 KSSKPGKKRRTIRLGTDQFMEEFGLPSKTRTKDGYNPLLDDFTNTKYLM 1326
             S+K GKKRRT+ L T  FMEEFGLPSKTRTKDGYNPLLDDF NTK+ +
Sbjct: 376  NSTKQGKKRRTLVLDTSAFMEEFGLPSKTRTKDGYNPLLDDFKNTKFYL 424


>ref|XP_002518105.1| conserved hypothetical protein [Ricinus communis]
            gi|223542701|gb|EEF44238.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 444

 Score =  641 bits (1653), Expect = 0.0
 Identities = 312/418 (74%), Positives = 354/418 (84%), Gaps = 1/418 (0%)
 Frame = +1

Query: 79   TSYSALFFSTSIVGEKPILVRDFIQSALYDPEHGYFSQRSGSVGLLEKSIKFNQLEGRRA 258
            TS     +ST IVG+KPILVRDFI SALY P HGYFSQRS SVG+LEKSIKFNQL+GR+A
Sbjct: 27   TSPFQALYSTHIVGDKPILVRDFIHSALYHPLHGYFSQRSRSVGVLEKSIKFNQLQGRKA 86

Query: 259  YMRYLDDIYKKNDIAWFTPVELFKPWYAHGIAEAIMRTANFSVPLKIYEIGGGSGTCAKC 438
            Y+ +LD IYK++DI+WFTPVELF PWYAHGIAEAIMRTAN SVPL+IYEIGGGSGTCAK 
Sbjct: 87   YLNHLDKIYKQSDISWFTPVELFNPWYAHGIAEAIMRTANLSVPLRIYEIGGGSGTCAKG 146

Query: 439  IMDYILLNAPERVYKNMTYTSVEISSSLAKKQIETVGEIRSHLSRFKVECRDAADRSGWG 618
            IMDYI+LNAP RVY  MTYTSVEIS SLA+ Q ETVGE+RSHLS+F+VECRDAADRSGWG
Sbjct: 147  IMDYIMLNAPSRVYNTMTYTSVEISPSLAEIQKETVGEVRSHLSKFRVECRDAADRSGWG 206

Query: 619  DVDQQPCWVIMLEVLDNLPHDLIYSENQVSPWLEVWLEREHDSAHAFEVYKSVQDPFISR 798
            DV+QQPCWVIMLEVLDNLPHDLIYSENQ+ PW EVW+E++HD     E+YK +QDP I  
Sbjct: 207  DVEQQPCWVIMLEVLDNLPHDLIYSENQILPWKEVWVEKQHDKKTLSELYKPLQDPLIKC 266

Query: 799  CIEIIDLDQDHSKMGSSVVSAARSIWSKVFPKPRKSWLPTGCLKLLEVLHGALPKMSLIA 978
            C+EII+ + D S       S A+S  SKVFP+PR+ WLPTGCLKLLEVLH ALPKMSLIA
Sbjct: 267  CVEIIESNSDQS------ASTAKSFLSKVFPRPRRCWLPTGCLKLLEVLHEALPKMSLIA 320

Query: 979  SDFNYLPDVRIPGDRAPLVSTKKDGKSTDLRSYLDVKGDSDIFFPTDFWLLERIDHYCSG 1158
            SDF++LPDV IPG+ APLVSTKKDG S+D +SYL+ KGD+DIFFPTDFWLLE++DHYCSG
Sbjct: 321  SDFSFLPDVSIPGEGAPLVSTKKDGCSSDYKSYLEAKGDADIFFPTDFWLLEQMDHYCSG 380

Query: 1159 SVSQWKDKSSKPGKKRRTIRLGTDQFMEEFGLPSKTRTKDGYNPLLDDFTNTK-YLMI 1329
             +   +DKSSK GKKRRT+ L T  FMEEFGLPSKTRTKDGYNPLLDDF NTK YL +
Sbjct: 381  WLKLHEDKSSKQGKKRRTLVLDTSSFMEEFGLPSKTRTKDGYNPLLDDFKNTKVYLSV 438


>ref|XP_003547338.1| PREDICTED: uncharacterized protein LOC100799456 [Glycine max]
          Length = 441

 Score =  640 bits (1652), Expect = 0.0
 Identities = 303/409 (74%), Positives = 352/409 (86%)
 Frame = +1

Query: 100  FSTSIVGEKPILVRDFIQSALYDPEHGYFSQRSGSVGLLEKSIKFNQLEGRRAYMRYLDD 279
            +ST IVG+KP+LVRDFI SALY P HGYFSQRS SVG+L  +IKFNQL+GR+AYM+YLD+
Sbjct: 26   YSTHIVGDKPVLVRDFIHSALYHPLHGYFSQRSRSVGVLPNAIKFNQLQGRKAYMKYLDN 85

Query: 280  IYKKNDIAWFTPVELFKPWYAHGIAEAIMRTANFSVPLKIYEIGGGSGTCAKCIMDYILL 459
            IYK++DI+WFTPVELFKPWYAH IAEAIMRTANFSVPLKIYEIGGGSGTCAK IMDYI+L
Sbjct: 86   IYKQSDISWFTPVELFKPWYAHAIAEAIMRTANFSVPLKIYEIGGGSGTCAKGIMDYIML 145

Query: 460  NAPERVYKNMTYTSVEISSSLAKKQIETVGEIRSHLSRFKVECRDAADRSGWGDVDQQPC 639
            NAP +VY +MTY SVEIS SLA+ Q ETVGE+RSH+ +F+VECRDAADR GWG V+QQPC
Sbjct: 146  NAPAKVYNSMTYISVEISPSLAEVQRETVGEVRSHIPKFRVECRDAADRIGWGQVEQQPC 205

Query: 640  WVIMLEVLDNLPHDLIYSENQVSPWLEVWLEREHDSAHAFEVYKSVQDPFISRCIEIIDL 819
            WVIMLEVLDNLPHDLIY+ENQ+S W+EVW+ER+HD     E+YK +QD  I+RC+EI+DL
Sbjct: 206  WVIMLEVLDNLPHDLIYAENQISSWMEVWVERQHDQETFSELYKPLQDSLITRCVEIMDL 265

Query: 820  DQDHSKMGSSVVSAARSIWSKVFPKPRKSWLPTGCLKLLEVLHGALPKMSLIASDFNYLP 999
            D+  +   S+  S  +SIWSKV+PKPR+ WLPTGCLKLLEVLH  LPKMSLIASDF+YLP
Sbjct: 266  DKTKTTQ-STAASTMKSIWSKVYPKPRRCWLPTGCLKLLEVLHEVLPKMSLIASDFSYLP 324

Query: 1000 DVRIPGDRAPLVSTKKDGKSTDLRSYLDVKGDSDIFFPTDFWLLERIDHYCSGSVSQWKD 1179
            DV+IPG+RAPLVSTKKDG S D  SY++ KGD+DIFFPTDFWLLE+IDHYCSG +    D
Sbjct: 325  DVKIPGERAPLVSTKKDGSSLDYDSYMEAKGDADIFFPTDFWLLEQIDHYCSGWLKLHGD 384

Query: 1180 KSSKPGKKRRTIRLGTDQFMEEFGLPSKTRTKDGYNPLLDDFTNTKYLM 1326
             SSK GKKRRTI L +  FMEEFGLP+KTRTKDGYNPLLDDF NTK+ +
Sbjct: 385  HSSKKGKKRRTITLESSSFMEEFGLPTKTRTKDGYNPLLDDFKNTKFYL 433


>ref|XP_002889527.1| hypothetical protein ARALYDRAFT_470475 [Arabidopsis lyrata subsp.
            lyrata] gi|297335369|gb|EFH65786.1| hypothetical protein
            ARALYDRAFT_470475 [Arabidopsis lyrata subsp. lyrata]
          Length = 447

 Score =  616 bits (1589), Expect = e-174
 Identities = 294/442 (66%), Positives = 362/442 (81%), Gaps = 1/442 (0%)
 Frame = +1

Query: 4    RYSAMKKLPLLFSTYRYSKVLLSVPTSYSALFFSTSIVGEKPILVRDFIQSALYDPEHGY 183
            R+   +K+PLL  +    +  L    S  A F +  ++G++P+LVRDFI +ALYDP+ GY
Sbjct: 5    RFIPSRKIPLLSWSRNVDQFELPSLGSLRAFFSTQKLIGDEPVLVRDFIHTALYDPQKGY 64

Query: 184  FSQRSGSVGLLEKSIKFNQLEGRRAYMRYLDDIYKKNDIAWFTPVELFKPWYAHGIAEAI 363
            FSQRS SVG+LE+SIKFNQLEGR+AYM+ L+ +YK++DI+WFTPVELFKPWYAHGIAEAI
Sbjct: 65   FSQRSKSVGVLERSIKFNQLEGRKAYMKLLEKVYKQSDISWFTPVELFKPWYAHGIAEAI 124

Query: 364  MRTANFSVPLKIYEIGGGSGTCAKCIMDYILLNAPERVYKNMTYTSVEISSSLAKKQIET 543
            +RT N SVPLKIYEIGGGSGTCAK ++DYI+LNAPER+Y NM+YTS+EIS SLAK Q ET
Sbjct: 125  LRTTNLSVPLKIYEIGGGSGTCAKGVLDYIMLNAPERIYNNMSYTSIEISPSLAKIQKET 184

Query: 544  VGEIRSHLSRFKVECRDAADRSGWGDVDQQPCWVIMLEVLDNLPHDLIYSENQVSPWLEV 723
            V ++ SHLS+F+VECRDA++ SGW +V+QQPCWVIMLEVLDNLPHDL+YS++QVSPW+EV
Sbjct: 185  VAQVGSHLSKFRVECRDASNLSGWKNVEQQPCWVIMLEVLDNLPHDLVYSKSQVSPWMEV 244

Query: 724  WLEREHDSAHAFEVYKSVQDPFISRCIEIIDLDQDHSKMGSSVVSAARSIWSKVFPKPRK 903
             +E + +S    E+YK ++DP I RCIEI++ + D        VS  + IWSK+FPKPR+
Sbjct: 245  LVENKPESEALSELYKPLEDPLIKRCIEIVEHEDD-------PVSKPKEIWSKLFPKPRR 297

Query: 904  SWLPTGCLKLLEVLHGALPKMSLIASDFNYLPDVRIPGDRAPLVSTKKDGKSTDLRSYLD 1083
            SWLPTGCLKLL+VLH  LPKMSLIASDF++LPDV++PG+RAPLVSTKKDG S+D  SYLD
Sbjct: 298  SWLPTGCLKLLDVLHAKLPKMSLIASDFSFLPDVKVPGERAPLVSTKKDGCSSDYSSYLD 357

Query: 1084 VKGDSDIFFPTDFWLLERIDHYCSGSVSQWKDKS-SKPGKKRRTIRLGTDQFMEEFGLPS 1260
             KGD+DIFFPTDFWLLER+DHYCSG     KD + SK G+KRRT+ L T  FM+EFGLPS
Sbjct: 358  AKGDADIFFPTDFWLLERMDHYCSGWRKMEKDGTPSKKGRKRRTLTLDTSAFMDEFGLPS 417

Query: 1261 KTRTKDGYNPLLDDFTNTKYLM 1326
            KTRTKDGYNPLLDDF NTK+ +
Sbjct: 418  KTRTKDGYNPLLDDFKNTKFYL 439


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