BLASTX nr result

ID: Coptis23_contig00009575 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009575
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309435.1| predicted protein [Populus trichocarpa] gi|2...   178   5e-43
gb|ABK96132.1| unknown [Populus trichocarpa]                          177   6e-43
gb|AFK48528.1| unknown [Lotus japonicus]                              176   2e-42
ref|XP_002277576.1| PREDICTED: probable pectate lyase 4-like [Vi...   174   7e-42
ref|XP_002311134.1| predicted protein [Populus trichocarpa] gi|2...   174   7e-42

>ref|XP_002309435.1| predicted protein [Populus trichocarpa] gi|222855411|gb|EEE92958.1|
           predicted protein [Populus trichocarpa]
          Length = 333

 Score =  178 bits (451), Expect = 5e-43
 Identities = 82/120 (68%), Positives = 98/120 (81%)
 Frame = -2

Query: 458 NNYTRDWGIYAVCISVDAQIYSQCNIYEAGKKKGTFKYLPEKAADKEEVSSGWVISEGDL 279
           NNY R+WGIYAVC SV++QIYSQCNIYEAG+KK  FKYL EKAADKEE SSG + SEGDL
Sbjct: 213 NNYIRNWGIYAVCASVESQIYSQCNIYEAGQKKIAFKYLSEKAADKEEASSGCIRSEGDL 272

Query: 278 YLNGAQACLPKEAIKDCTFHPSEFYPTWTTEAPSESLKEVLRHCTGWQSIPRPAEKTVIA 99
           ++ GAQA L  E  + C FHPSE+YPTWT E P++SLK+VL+HCTGWQ +PRPA+  + A
Sbjct: 273 FVIGAQAGLMTEDGEVCMFHPSEYYPTWTVEPPTDSLKQVLQHCTGWQCVPRPADHPLAA 332


>gb|ABK96132.1| unknown [Populus trichocarpa]
          Length = 389

 Score =  177 bits (450), Expect = 6e-43
 Identities = 82/120 (68%), Positives = 98/120 (81%)
 Frame = -2

Query: 458 NNYTRDWGIYAVCISVDAQIYSQCNIYEAGKKKGTFKYLPEKAADKEEVSSGWVISEGDL 279
           NNY R+WGIYAVC SV++QIYSQCNIYEAG+KK  FKYL EKAADKEE SSG + SEGDL
Sbjct: 269 NNYIRNWGIYAVCASVESQIYSQCNIYEAGQKKIAFKYLSEKAADKEEASSGCIRSEGDL 328

Query: 278 YLNGAQACLPKEAIKDCTFHPSEFYPTWTTEAPSESLKEVLRHCTGWQSIPRPAEKTVIA 99
           ++ GAQA L  E  + C FHPSE+YPTWT E P++SLK+VL+HCTGWQ +PRPA+  + A
Sbjct: 329 FVIGAQAGLMAEDGEFCMFHPSEYYPTWTIEPPTDSLKQVLQHCTGWQCVPRPADHPLAA 388


>gb|AFK48528.1| unknown [Lotus japonicus]
          Length = 331

 Score =  176 bits (445), Expect = 2e-42
 Identities = 79/119 (66%), Positives = 97/119 (81%)
 Frame = -2

Query: 458 NNYTRDWGIYAVCISVDAQIYSQCNIYEAGKKKGTFKYLPEKAADKEEVSSGWVISEGDL 279
           NNYTR+WGIYAVC SV++QIYSQCNIYEAG KK TF++  EKAADKEE  +G++ISEGD+
Sbjct: 213 NNYTRNWGIYAVCASVESQIYSQCNIYEAGTKKKTFEFYTEKAADKEEQKTGFLISEGDM 272

Query: 278 YLNGAQACLPKEAIKDCTFHPSEFYPTWTTEAPSESLKEVLRHCTGWQSIPRPAEKTVI 102
           +LNGAQ CLP E  ++  FHPSE+YPTWT EA   SL+++L+ CTGWQSI RP + T I
Sbjct: 273 FLNGAQPCLPTEYKEESMFHPSEYYPTWTMEAADNSLRDILQLCTGWQSICRPEDHTTI 331


>ref|XP_002277576.1| PREDICTED: probable pectate lyase 4-like [Vitis vinifera]
          Length = 373

 Score =  174 bits (441), Expect = 7e-42
 Identities = 82/120 (68%), Positives = 96/120 (80%)
 Frame = -2

Query: 458 NNYTRDWGIYAVCISVDAQIYSQCNIYEAGKKKGTFKYLPEKAADKEEVSSGWVISEGDL 279
           NNYTR+WGIYAVC SV++QIYSQCNIYEAG KK  FKYL EKAADKEE  +G + SEGDL
Sbjct: 256 NNYTRNWGIYAVCASVESQIYSQCNIYEAGHKKVAFKYLTEKAADKEEERTGCLRSEGDL 315

Query: 278 YLNGAQACLPKEAIKDCTFHPSEFYPTWTTEAPSESLKEVLRHCTGWQSIPRPAEKTVIA 99
           ++NG QA L   A +   FHP EFYPTWT EAPS++LK+VL HCTGWQ +PRPA++  IA
Sbjct: 316 FINGTQAGLMTVASE--MFHPREFYPTWTVEAPSDALKQVLHHCTGWQCVPRPADEAAIA 373


>ref|XP_002311134.1| predicted protein [Populus trichocarpa] gi|222850954|gb|EEE88501.1|
           predicted protein [Populus trichocarpa]
          Length = 327

 Score =  174 bits (441), Expect = 7e-42
 Identities = 78/114 (68%), Positives = 96/114 (84%)
 Frame = -2

Query: 458 NNYTRDWGIYAVCISVDAQIYSQCNIYEAGKKKGTFKYLPEKAADKEEVSSGWVISEGDL 279
           NNYTR+WGIYAVC SV+AQIYSQCNIYEAG+KK TF++  EKAAD++  SSG + SEGD+
Sbjct: 212 NNYTRNWGIYAVCASVEAQIYSQCNIYEAGQKKKTFEFYTEKAADRQGASSGLIRSEGDV 271

Query: 278 YLNGAQACLPKEAIKDCTFHPSEFYPTWTTEAPSESLKEVLRHCTGWQSIPRPA 117
            LNGAQ+CL +   ++C FHP E+YPTWT E+P +SLK+VL+ CTGWQSIPRPA
Sbjct: 272 LLNGAQSCLLQGVGENCVFHPGEYYPTWTLESPLDSLKDVLQICTGWQSIPRPA 325


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