BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009558
         (588 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520737.1| ribosome recycling factor, putative [Ricinus...   113   2e-23
ref|XP_002302112.1| predicted protein [Populus trichocarpa] gi|2...   112   4e-23
gb|ABK96574.1| unknown [Populus trichocarpa x Populus deltoides]      112   4e-23
ref|XP_004158409.1| PREDICTED: ribosome-recycling factor, chloro...   112   6e-23
ref|XP_004140097.1| PREDICTED: ribosome-recycling factor, chloro...   112   6e-23

>ref|XP_002520737.1| ribosome recycling factor, putative [Ricinus communis]
           gi|223540122|gb|EEF41699.1| ribosome recycling factor,
           putative [Ricinus communis]
          Length = 247

 Score =  113 bits (283), Expect = 2e-23
 Identities = 55/67 (82%), Positives = 62/67 (92%)
 Frame = +1

Query: 244 KTRMEKTIESVRENFNAVRTGRANPSMLDRVEVESYGTPVSLKSIAQISSPDASSLLIQP 423
           K RMEKTIE+VR NFN++RTGRANPSMLD++EVE YGTPVSLKSIAQIS+PDASSLL+QP
Sbjct: 87  KARMEKTIETVRTNFNSIRTGRANPSMLDKIEVEYYGTPVSLKSIAQISTPDASSLLVQP 146

Query: 424 YDKSRNK 444
           YDKS  K
Sbjct: 147 YDKSSLK 153


>ref|XP_002302112.1| predicted protein [Populus trichocarpa] gi|222843838|gb|EEE81385.1|
           predicted protein [Populus trichocarpa]
          Length = 286

 Score =  112 bits (281), Expect = 4e-23
 Identities = 62/95 (65%), Positives = 75/95 (78%), Gaps = 1/95 (1%)
 Frame = +1

Query: 163 VIENRRRKVLVIANRE-ENKKRLLIIL*KTRMEKTIESVRENFNAVRTGRANPSMLDRVE 339
           +++NRR  V      E E +K L+    K RMEKTI+++R NFN+VRTGRANPSMLD++E
Sbjct: 83  LLQNRRGVVRNATIEEIEAEKSLIEDDAKGRMEKTIDTMRANFNSVRTGRANPSMLDKIE 142

Query: 340 VESYGTPVSLKSIAQISSPDASSLLIQPYDKSRNK 444
           VE YGTPVSLKSIAQIS+PDASSLL+QPYDKS  K
Sbjct: 143 VEYYGTPVSLKSIAQISTPDASSLLVQPYDKSSLK 177


>gb|ABK96574.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 286

 Score =  112 bits (281), Expect = 4e-23
 Identities = 62/95 (65%), Positives = 75/95 (78%), Gaps = 1/95 (1%)
 Frame = +1

Query: 163 VIENRRRKVLVIANRE-ENKKRLLIIL*KTRMEKTIESVRENFNAVRTGRANPSMLDRVE 339
           +++NRR  V      E E +K L+    K RMEKTI+++R NFN+VRTGRANPSMLD++E
Sbjct: 83  LLQNRRGVVRNATIEEIEAEKSLIEDDAKGRMEKTIDTMRTNFNSVRTGRANPSMLDKIE 142

Query: 340 VESYGTPVSLKSIAQISSPDASSLLIQPYDKSRNK 444
           VE YGTPVSLKSIAQIS+PDASSLL+QPYDKS  K
Sbjct: 143 VEYYGTPVSLKSIAQISTPDASSLLVQPYDKSSLK 177


>ref|XP_004158409.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Cucumis
           sativus]
          Length = 270

 Score =  112 bits (279), Expect = 6e-23
 Identities = 60/95 (63%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
 Frame = +1

Query: 163 VIENRRRKVLVIANRE-ENKKRLLIIL*KTRMEKTIESVRENFNAVRTGRANPSMLDRVE 339
           V +NRR  V      E E +K L+    K RMEKTI++VR NFN++RTGR+NP+MLD++E
Sbjct: 75  VFKNRRLVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIE 134

Query: 340 VESYGTPVSLKSIAQISSPDASSLLIQPYDKSRNK 444
           VE YG+PVSLKSIAQIS+PDASSLL+QPYDKS  K
Sbjct: 135 VEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLK 169


>ref|XP_004140097.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Cucumis
           sativus]
          Length = 278

 Score =  112 bits (279), Expect = 6e-23
 Identities = 60/95 (63%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
 Frame = +1

Query: 163 VIENRRRKVLVIANRE-ENKKRLLIIL*KTRMEKTIESVRENFNAVRTGRANPSMLDRVE 339
           V +NRR  V      E E +K L+    K RMEKTI++VR NFN++RTGR+NP+MLD++E
Sbjct: 75  VFKNRRLVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIE 134

Query: 340 VESYGTPVSLKSIAQISSPDASSLLIQPYDKSRNK 444
           VE YG+PVSLKSIAQIS+PDASSLL+QPYDKS  K
Sbjct: 135 VEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLK 169