BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009554
         (449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635488.1| PREDICTED: pentatricopeptide repeat-containi...   206   2e-51
ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containi...   206   2e-51
emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]   206   2e-51
emb|CBI18837.3| unnamed protein product [Vitis vinifera]              205   3e-51
ref|XP_002875992.1| pentatricopeptide repeat-containing protein ...   190   1e-46

>ref|XP_003635488.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Vitis vinifera]
          Length = 358

 Score =  206 bits (524), Expect = 2e-51
 Identities = 102/123 (82%), Positives = 110/123 (89%), Gaps = 1/123 (0%)
 Frame = -2

Query: 445 HVFVAEDRCHPMIREIYIFLEEMSKKMKLAGYVPDLRWALVKDDCLEG-EKEMVLGHHSE 269
           HVFVAED  HPMI+EIY FLEEMS KMK AGYVPD+RWALVKDD   G EKE+ LGHHSE
Sbjct: 233 HVFVAEDSSHPMIKEIYEFLEEMSGKMKRAGYVPDVRWALVKDDGTRGGEKEIRLGHHSE 292

Query: 268 KLAVAFGLMNTQDGEPILVVKNLRICGDCHNAIKFISAIVGREITVRDSLRFHCFKEGRC 89
           KLAVAFGL++T+DGEPILVVKNLRICGDCHNAIKFISAI GREITVRD+ RFHCFKEG+C
Sbjct: 293 KLAVAFGLISTKDGEPILVVKNLRICGDCHNAIKFISAIAGREITVRDAHRFHCFKEGQC 352

Query: 88  S*G 80
           S G
Sbjct: 353 SCG 355


>ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Vitis vinifera]
          Length = 719

 Score =  206 bits (523), Expect = 2e-51
 Identities = 101/123 (82%), Positives = 110/123 (89%), Gaps = 1/123 (0%)
 Frame = -2

Query: 445 HVFVAEDRCHPMIREIYIFLEEMSKKMKLAGYVPDLRWALVKDDCLEG-EKEMVLGHHSE 269
           HVFVAED  HPMI+EIY FLEEMS KMK AGYVPD+RWALVKDD   G EKE+ LGHHSE
Sbjct: 594 HVFVAEDSSHPMIKEIYEFLEEMSGKMKRAGYVPDVRWALVKDDGTRGGEKEIRLGHHSE 653

Query: 268 KLAVAFGLMNTQDGEPILVVKNLRICGDCHNAIKFISAIVGREITVRDSLRFHCFKEGRC 89
           KLAVAFGL++T+DGEP+LVVKNLRICGDCHNAIKFISAI GREITVRD+ RFHCFKEG+C
Sbjct: 654 KLAVAFGLISTKDGEPVLVVKNLRICGDCHNAIKFISAIAGREITVRDAHRFHCFKEGQC 713

Query: 88  S*G 80
           S G
Sbjct: 714 SCG 716


>emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
          Length = 719

 Score =  206 bits (523), Expect = 2e-51
 Identities = 101/123 (82%), Positives = 110/123 (89%), Gaps = 1/123 (0%)
 Frame = -2

Query: 445 HVFVAEDRCHPMIREIYIFLEEMSKKMKLAGYVPDLRWALVKDDCLEG-EKEMVLGHHSE 269
           HVFVAED  HPMI+EIY FLEEMS KMK AGYVPD+RWALVKDD   G EKE+ LGHHSE
Sbjct: 594 HVFVAEDSSHPMIKEIYEFLEEMSGKMKRAGYVPDVRWALVKDDGTRGGEKEIRLGHHSE 653

Query: 268 KLAVAFGLMNTQDGEPILVVKNLRICGDCHNAIKFISAIVGREITVRDSLRFHCFKEGRC 89
           KLAVAFGL++T+DGEP+LVVKNLRICGDCHNAIKFISAI GREITVRD+ RFHCFKEG+C
Sbjct: 654 KLAVAFGLISTKDGEPVLVVKNLRICGDCHNAIKFISAIAGREITVRDAHRFHCFKEGQC 713

Query: 88  S*G 80
           S G
Sbjct: 714 SCG 716


>emb|CBI18837.3| unnamed protein product [Vitis vinifera]
          Length = 1589

 Score =  205 bits (522), Expect = 3e-51
 Identities = 101/121 (83%), Positives = 109/121 (90%), Gaps = 1/121 (0%)
 Frame = -2

Query: 445 HVFVAEDRCHPMIREIYIFLEEMSKKMKLAGYVPDLRWALVKDDCLEG-EKEMVLGHHSE 269
           HVFVAED  HPMI+EIY FLEEMS KMK AGYVPD+RWALVKDD   G EKE+ LGHHSE
Sbjct: 220 HVFVAEDSSHPMIKEIYEFLEEMSGKMKRAGYVPDVRWALVKDDGTRGGEKEIRLGHHSE 279

Query: 268 KLAVAFGLMNTQDGEPILVVKNLRICGDCHNAIKFISAIVGREITVRDSLRFHCFKEGRC 89
           KLAVAFGL++T+DGEPILVVKNLRICGDCHNAIKFISAI GREITVRD+ RFHCFKEG+C
Sbjct: 280 KLAVAFGLISTKDGEPILVVKNLRICGDCHNAIKFISAIAGREITVRDAHRFHCFKEGQC 339

Query: 88  S 86
           S
Sbjct: 340 S 340


>ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297321830|gb|EFH52251.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 721

 Score =  190 bits (482), Expect = 1e-46
 Identities = 92/123 (74%), Positives = 106/123 (86%), Gaps = 1/123 (0%)
 Frame = -2

Query: 445 HVFVAEDRCHPMIREIYIFLEEMSKKMKLAGYVPDLRWALVKDD-CLEGEKEMVLGHHSE 269
           HVFVAED  HPMIRE+  +LEEM KKMK  GYV D +WA+VK+D   EGE+EM LGHHSE
Sbjct: 596 HVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGEEEMRLGHHSE 655

Query: 268 KLAVAFGLMNTQDGEPILVVKNLRICGDCHNAIKFISAIVGREITVRDSLRFHCFKEGRC 89
           KLAVAFGLM+T+DGE I+VVKNLRICGDCHNAIKF+SA+ GREI VRD+LRFHCFK+G+C
Sbjct: 656 KLAVAFGLMSTRDGEEIVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKC 715

Query: 88  S*G 80
           S G
Sbjct: 716 SCG 718