BLASTX nr result

ID: Coptis23_contig00009551 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009551
         (972 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274170.1| PREDICTED: uncharacterized protein LOC100247...   186   7e-45
emb|CAN60858.1| hypothetical protein VITISV_039453 [Vitis vinifera]   186   7e-45
emb|CAN76964.1| hypothetical protein VITISV_043960 [Vitis vinifera]   186   7e-45
ref|XP_002886608.1| predicted protein [Arabidopsis lyrata subsp....   181   2e-43
ref|NP_974054.1| SWIM zinc finger-like protein [Arabidopsis thal...   180   5e-43

>ref|XP_002274170.1| PREDICTED: uncharacterized protein LOC100247174 [Vitis vinifera]
           gi|296088541|emb|CBI37532.3| unnamed protein product
           [Vitis vinifera]
          Length = 720

 Score =  186 bits (472), Expect = 7e-45
 Identities = 85/108 (78%), Positives = 94/108 (87%)
 Frame = +3

Query: 618 DIPVQNPAEEDFSSADLEWTKYGTDEHHDDVALIPYERVDSFIMGECLYLECPTRFHIER 797
           DIPVQ+P EE+FSSADL WTK+G  EHHDDVALIPY RVD+FI+GEC  +ECPTRFHIER
Sbjct: 9   DIPVQDPKEEEFSSADLNWTKFGNPEHHDDVALIPYARVDAFIIGECSNVECPTRFHIER 68

Query: 798 GRRRKKRSLKTYKSDEYLEDRVYWCSFGPENYGEGSTILYSRRYRLNT 941
           GR+R K SLK YK+DEYLE R+YWCSFGPENYGEG  IL SRRYRLNT
Sbjct: 69  GRKRSKGSLKEYKNDEYLEYRLYWCSFGPENYGEGGGILPSRRYRLNT 116


>emb|CAN60858.1| hypothetical protein VITISV_039453 [Vitis vinifera]
          Length = 706

 Score =  186 bits (472), Expect = 7e-45
 Identities = 85/108 (78%), Positives = 94/108 (87%)
 Frame = +3

Query: 618 DIPVQNPAEEDFSSADLEWTKYGTDEHHDDVALIPYERVDSFIMGECLYLECPTRFHIER 797
           DIPVQ+P EE+FSSADL WTK+G  EHHDDVALIPY RVD+FI+GEC  +ECPTRFHIER
Sbjct: 9   DIPVQDPKEEEFSSADLNWTKFGNPEHHDDVALIPYARVDAFIIGECSNVECPTRFHIER 68

Query: 798 GRRRKKRSLKTYKSDEYLEDRVYWCSFGPENYGEGSTILYSRRYRLNT 941
           GR+R K SLK YK+DEYLE R+YWCSFGPENYGEG  IL SRRYRLNT
Sbjct: 69  GRKRSKGSLKEYKNDEYLEYRLYWCSFGPENYGEGGGILPSRRYRLNT 116


>emb|CAN76964.1| hypothetical protein VITISV_043960 [Vitis vinifera]
          Length = 706

 Score =  186 bits (472), Expect = 7e-45
 Identities = 85/108 (78%), Positives = 94/108 (87%)
 Frame = +3

Query: 618 DIPVQNPAEEDFSSADLEWTKYGTDEHHDDVALIPYERVDSFIMGECLYLECPTRFHIER 797
           DIPVQ+P EE+FSSADL WTK+G  EHHDDVALIPY RVD+FI+GEC  +ECPTRFHIER
Sbjct: 9   DIPVQDPKEEEFSSADLNWTKFGNPEHHDDVALIPYARVDAFIIGECSNVECPTRFHIER 68

Query: 798 GRRRKKRSLKTYKSDEYLEDRVYWCSFGPENYGEGSTILYSRRYRLNT 941
           GR+R K SLK YK+DEYLE R+YWCSFGPENYGEG  IL SRRYRLNT
Sbjct: 69  GRKRSKGSLKEYKNDEYLEYRLYWCSFGPENYGEGGGILPSRRYRLNT 116


>ref|XP_002886608.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297332449|gb|EFH62867.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 703

 Score =  181 bits (459), Expect = 2e-43
 Identities = 83/115 (72%), Positives = 94/115 (81%)
 Frame = +3

Query: 597 EVRAVAKDIPVQNPAEEDFSSADLEWTKYGTDEHHDDVALIPYERVDSFIMGECLYLECP 776
           E+    ++IPVQNP  EDFS ADL WTK+GT EHHD+VALIPY RVD FI+GEC   ECP
Sbjct: 2   EIVESIEEIPVQNPQIEDFSWADLTWTKFGTSEHHDEVALIPYSRVDEFIIGECSNAECP 61

Query: 777 TRFHIERGRRRKKRSLKTYKSDEYLEDRVYWCSFGPENYGEGSTILYSRRYRLNT 941
           TRFHIERGR+R + SLK YKSDEYLE R+YWCSFGPENYGEG  +L SR+YRLNT
Sbjct: 62  TRFHIERGRKRSRGSLKEYKSDEYLEYRLYWCSFGPENYGEGGGVLPSRKYRLNT 116


>ref|NP_974054.1| SWIM zinc finger-like protein [Arabidopsis thaliana]
           gi|332195576|gb|AEE33697.1| SWIM zinc finger-like
           protein [Arabidopsis thaliana]
          Length = 500

 Score =  180 bits (456), Expect = 5e-43
 Identities = 82/115 (71%), Positives = 93/115 (80%)
 Frame = +3

Query: 597 EVRAVAKDIPVQNPAEEDFSSADLEWTKYGTDEHHDDVALIPYERVDSFIMGECLYLECP 776
           E+    ++IPVQNP  EDFS ADL WTK+GT EHHD VAL+PY RVD FI+GEC   ECP
Sbjct: 2   EIVESLEEIPVQNPQVEDFSWADLTWTKFGTSEHHDQVALVPYARVDEFIIGECSNAECP 61

Query: 777 TRFHIERGRRRKKRSLKTYKSDEYLEDRVYWCSFGPENYGEGSTILYSRRYRLNT 941
           TRFHIERGR+R + SLK YKSDEYLE R+YWCSFGPENYGEG  +L SR+YRLNT
Sbjct: 62  TRFHIERGRKRSRGSLKEYKSDEYLEYRLYWCSFGPENYGEGGGVLPSRKYRLNT 116


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