BLASTX nr result

ID: Coptis23_contig00009548 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009548
         (1412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270524.1| PREDICTED: U-box domain-containing protein 1...   692   0.0  
ref|XP_002311996.1| predicted protein [Populus trichocarpa] gi|2...   656   0.0  
ref|XP_003535520.1| PREDICTED: U-box domain-containing protein 1...   654   0.0  
ref|XP_003556245.1| PREDICTED: U-box domain-containing protein 1...   651   0.0  
ref|XP_002315320.1| predicted protein [Populus trichocarpa] gi|2...   643   0.0  

>ref|XP_002270524.1| PREDICTED: U-box domain-containing protein 14 [Vitis vinifera]
          Length = 628

 Score =  692 bits (1785), Expect = 0.0
 Identities = 362/450 (80%), Positives = 388/450 (86%), Gaps = 1/450 (0%)
 Frame = -1

Query: 1412 LQLRTINDLKKESLSLHEMVLSCGGDPGDCLEDMSALLKKLKDSVLTENPDADTSEGEI- 1236
            LQLRTINDLKKESL+LHEMV+S   DPGDC   MS+LL+KLKD VLT NP+ADTSEGE  
Sbjct: 180  LQLRTINDLKKESLALHEMVISSSVDPGDCFAKMSSLLRKLKDYVLTINPEADTSEGEKG 239

Query: 1235 FFKHRSPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIQKWLDAGHRTCPKTQQTLVHT 1056
            F KHRSPVIPDDFRCPISLELM+DPVIVSTGQTYERSCIQKWLDAGH+TCPKTQQTL+HT
Sbjct: 240  FIKHRSPVIPDDFRCPISLELMRDPVIVSTGQTYERSCIQKWLDAGHKTCPKTQQTLLHT 299

Query: 1055 ALTPNYVLKSLISQWCESNGVELPKKQGECKNWKSSTSVSDCDRAAIDALLLKLSNRDPE 876
            ALTPNYVLKSLI+ WCESNG+ELPK Q  C+N K+   VSDCDR AI ALL KL + +PE
Sbjct: 300  ALTPNYVLKSLIALWCESNGIELPKNQDNCRNKKTGKFVSDCDRPAIHALLQKLLDGNPE 359

Query: 875  DQRAAAGELRLLAKRNGDNRVCIAEAGAIPLLVELLSSPDSRTQEHAVTALLNLSINETN 696
             QRAAAGELRLLAKRN DNRVCIAEAGAIP LVELLSS D RTQEHAVTALLNLSINE N
Sbjct: 360  IQRAAAGELRLLAKRNADNRVCIAEAGAIPRLVELLSSTDPRTQEHAVTALLNLSINEAN 419

Query: 695  KVSIVNAGAIPDIVDVLKNGSMEARENAAATLFSLSVIDENKVXXXXXXXXXXXXXXLCH 516
            K SIV +GAIPDIVDVLK GSMEARENAAATLFSLSVIDENKV              LC 
Sbjct: 420  KGSIVISGAIPDIVDVLKTGSMEARENAAATLFSLSVIDENKVIIGAAGAIPALIDLLCQ 479

Query: 515  GSPRGKKDAATAIFNLSIYQGNKVRAVRAGIVVPLMRLLTDAAGGMVDEALAILAILASH 336
            G+PRGKKDAATAIFNL+IYQGNKVRAVRAGIVVPLMR L DA GGMVDEALAILAILASH
Sbjct: 480  GTPRGKKDAATAIFNLAIYQGNKVRAVRAGIVVPLMRFLKDAGGGMVDEALAILAILASH 539

Query: 335  QEGRVAIGQAEPTPVLVEVMRTGSPRNRENAAAVLWSLCTADGKHLKTSKECGVEEALKD 156
            QEG++AIGQAEP PVLVEV++TGSPRNRENAAAVLWSLCT D +HLK ++E G EEALK+
Sbjct: 540  QEGKLAIGQAEPFPVLVEVIKTGSPRNRENAAAVLWSLCTGDAQHLKIARELGAEEALKE 599

Query: 155  LSENGTDRAKRKAANLLELLHRTVEEVVSP 66
            LSENGTDRAKRKA N+LELL R VE VV P
Sbjct: 600  LSENGTDRAKRKAGNILELLQR-VEVVVDP 628


>ref|XP_002311996.1| predicted protein [Populus trichocarpa] gi|222851816|gb|EEE89363.1|
            predicted protein [Populus trichocarpa]
          Length = 628

 Score =  656 bits (1692), Expect = 0.0
 Identities = 336/442 (76%), Positives = 376/442 (85%), Gaps = 1/442 (0%)
 Frame = -1

Query: 1412 LQLRTINDLKKESLSLHEMVLSCGGDPGDCLEDMSALLKKLKDSVLTENPDADTSE-GEI 1236
            L L+TI+DLKKESL+ HE+V++ GGDPGD  + M++L KKLKD V TENP+ D++E G+ 
Sbjct: 179  LHLQTIDDLKKESLAFHELVIASGGDPGDWFKKMASLFKKLKDYVQTENPEIDSAEAGKG 238

Query: 1235 FFKHRSPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIQKWLDAGHRTCPKTQQTLVHT 1056
              KHRSPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIQKWLDAGH+TCPKTQQTL+HT
Sbjct: 239  MIKHRSPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIQKWLDAGHKTCPKTQQTLLHT 298

Query: 1055 ALTPNYVLKSLISQWCESNGVELPKKQGECKNWKSSTSVSDCDRAAIDALLLKLSNRDPE 876
            ALTPNYVLKSLI+ WCESNGVELPK+ G C++ K  +S+SDCDRAA+  LL KL N   E
Sbjct: 299  ALTPNYVLKSLIALWCESNGVELPKQPGACRSKKVGSSMSDCDRAAVTTLLDKLGNGSLE 358

Query: 875  DQRAAAGELRLLAKRNGDNRVCIAEAGAIPLLVELLSSPDSRTQEHAVTALLNLSINETN 696
             QR+AAGELRLLAKRN DNRVCIAEAGA+PLLVELLSS D RTQEHAVTALLNLSIN+ N
Sbjct: 359  QQRSAAGELRLLAKRNADNRVCIAEAGAVPLLVELLSSTDPRTQEHAVTALLNLSINDLN 418

Query: 695  KVSIVNAGAIPDIVDVLKNGSMEARENAAATLFSLSVIDENKVXXXXXXXXXXXXXXLCH 516
            K +IVNAGAIPDIVDVLKNGSMEARENAAATLFSLSVIDENKV              LC 
Sbjct: 419  KGTIVNAGAIPDIVDVLKNGSMEARENAAATLFSLSVIDENKVAIGAAGAIPALIKLLCD 478

Query: 515  GSPRGKKDAATAIFNLSIYQGNKVRAVRAGIVVPLMRLLTDAAGGMVDEALAILAILASH 336
            G+PRGKKDAATAIFNLSIYQGNK RAV+AGIV PLMRLL DA GGMVDEALAILAILA H
Sbjct: 479  GTPRGKKDAATAIFNLSIYQGNKARAVKAGIVPPLMRLLRDAGGGMVDEALAILAILAGH 538

Query: 335  QEGRVAIGQAEPTPVLVEVMRTGSPRNRENAAAVLWSLCTADGKHLKTSKECGVEEALKD 156
            QEG+VAIGQ +P PVL+EV+RTGS RNRENA A+LWSLCT D + L  +K+ G EEALK+
Sbjct: 539  QEGKVAIGQVDPIPVLIEVIRTGSQRNRENAVAILWSLCTGDSQQLILAKQFGAEEALKE 598

Query: 155  LSENGTDRAKRKAANLLELLHR 90
            LSE+GTDRAKRKA ++LELL R
Sbjct: 599  LSESGTDRAKRKAGSILELLQR 620


>ref|XP_003535520.1| PREDICTED: U-box domain-containing protein 14-like [Glycine max]
          Length = 632

 Score =  654 bits (1686), Expect = 0.0
 Identities = 339/443 (76%), Positives = 377/443 (85%), Gaps = 2/443 (0%)
 Frame = -1

Query: 1412 LQLRTINDLKKESLSLHEMVLSCGGDPGDCLEDMSALLKKLKDSVLTENPDADTSEGE-I 1236
            L LRTINDL+KES  LHE+ ++ GG+ GD  E +++LL KL++ VLTENP+ D+SE E +
Sbjct: 180  LHLRTINDLRKESSELHELFITSGGELGDSFEMITSLLSKLRECVLTENPEVDSSECEKL 239

Query: 1235 FFKHRSPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIQKWLDAGHRTCPKTQQTLVHT 1056
              KHRSP+IPDDFRCPISLELMKDPVIVSTGQTYERSCIQKWLDAGH+TCPKTQQTLVHT
Sbjct: 240  SVKHRSPMIPDDFRCPISLELMKDPVIVSTGQTYERSCIQKWLDAGHKTCPKTQQTLVHT 299

Query: 1055 ALTPNYVLKSLISQWCESNGVELPKKQGECKNWK-SSTSVSDCDRAAIDALLLKLSNRDP 879
            ALTPNYVLKSLI+ WCESNG+ELPKKQG C+  K   +S+SDCDR AI ALL KL++ D 
Sbjct: 300  ALTPNYVLKSLIALWCESNGIELPKKQGNCRTKKCGGSSLSDCDRTAISALLDKLTSNDI 359

Query: 878  EDQRAAAGELRLLAKRNGDNRVCIAEAGAIPLLVELLSSPDSRTQEHAVTALLNLSINET 699
            E QRAAAGELRLLAKRN DNRVCIAEAGAIP LV+LLSS D RTQEHAVTALLNLSINE+
Sbjct: 360  EQQRAAAGELRLLAKRNADNRVCIAEAGAIPPLVDLLSSSDPRTQEHAVTALLNLSINES 419

Query: 698  NKVSIVNAGAIPDIVDVLKNGSMEARENAAATLFSLSVIDENKVXXXXXXXXXXXXXXLC 519
            NK +IVNAGAIPDIVDVLKNGSMEARENAAATLFSLSV+DENKV              LC
Sbjct: 420  NKGTIVNAGAIPDIVDVLKNGSMEARENAAATLFSLSVLDENKVQIGAAGAIPALIKLLC 479

Query: 518  HGSPRGKKDAATAIFNLSIYQGNKVRAVRAGIVVPLMRLLTDAAGGMVDEALAILAILAS 339
             G+PRGKKDAATAIFNLSIYQGNK RAV+AGIV PL++ LTDA GGMVDEALAI+AILAS
Sbjct: 480  EGTPRGKKDAATAIFNLSIYQGNKARAVKAGIVAPLIQFLTDAGGGMVDEALAIMAILAS 539

Query: 338  HQEGRVAIGQAEPTPVLVEVMRTGSPRNRENAAAVLWSLCTADGKHLKTSKECGVEEALK 159
            H EGRVAIGQAEP  +LVEV+RTGSPRNRENAAAVLWSLCT D   LK +KE G E AL+
Sbjct: 540  HHEGRVAIGQAEPIHILVEVIRTGSPRNRENAAAVLWSLCTGDPLQLKLAKEHGAEAALQ 599

Query: 158  DLSENGTDRAKRKAANLLELLHR 90
            +LSENGTDRAKRKA ++LELL R
Sbjct: 600  ELSENGTDRAKRKAGSILELLQR 622


>ref|XP_003556245.1| PREDICTED: U-box domain-containing protein 14-like [Glycine max]
          Length = 631

 Score =  651 bits (1679), Expect = 0.0
 Identities = 339/443 (76%), Positives = 375/443 (84%), Gaps = 2/443 (0%)
 Frame = -1

Query: 1412 LQLRTINDLKKESLSLHEMVLSCGGDPGDCLEDMSALLKKLKDSVLTENPDADTSEGE-I 1236
            L LRTINDL+KES  L E++++ GG+ GD  E +++LL KL++ VLTENP+  T E E +
Sbjct: 179  LHLRTINDLRKESSELPELLITSGGELGDSFEMITSLLSKLRECVLTENPEVGTGECEKL 238

Query: 1235 FFKHRSPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIQKWLDAGHRTCPKTQQTLVHT 1056
              KHRSPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIQKWLDAGH+TCPKTQQTLVHT
Sbjct: 239  SVKHRSPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIQKWLDAGHKTCPKTQQTLVHT 298

Query: 1055 ALTPNYVLKSLISQWCESNGVELPKKQGECKNWK-SSTSVSDCDRAAIDALLLKLSNRDP 879
            ALTPNYVLKSLI+ WCESNG+ELPKKQG C+  K   +S+SDCDR AI ALL KL + D 
Sbjct: 299  ALTPNYVLKSLIALWCESNGIELPKKQGSCRTKKCGGSSLSDCDRTAISALLDKLMSNDI 358

Query: 878  EDQRAAAGELRLLAKRNGDNRVCIAEAGAIPLLVELLSSPDSRTQEHAVTALLNLSINET 699
            E QRAAAGELRLLAKRN DNRVCIAEAGAIP LV+LLSS D RTQEHAVTALLNLSINE+
Sbjct: 359  EQQRAAAGELRLLAKRNADNRVCIAEAGAIPPLVDLLSSSDPRTQEHAVTALLNLSINES 418

Query: 698  NKVSIVNAGAIPDIVDVLKNGSMEARENAAATLFSLSVIDENKVXXXXXXXXXXXXXXLC 519
            NK +IVNAGAIPDIVDVLKNGSMEARENAAATLFSLSV+DENKV              LC
Sbjct: 419  NKGTIVNAGAIPDIVDVLKNGSMEARENAAATLFSLSVLDENKVQIGAAGAIPALIKLLC 478

Query: 518  HGSPRGKKDAATAIFNLSIYQGNKVRAVRAGIVVPLMRLLTDAAGGMVDEALAILAILAS 339
             G+PRGKKDAATAIFNLSIYQGNK RAV+AGIVVPL++ L DA GGMVDEALAI+AILAS
Sbjct: 479  EGTPRGKKDAATAIFNLSIYQGNKARAVKAGIVVPLIQFLKDAGGGMVDEALAIMAILAS 538

Query: 338  HQEGRVAIGQAEPTPVLVEVMRTGSPRNRENAAAVLWSLCTADGKHLKTSKECGVEEALK 159
            H EGRVAIGQAEP P+LVEV+RTGSPRNRENAAAVLWSLCT D   LK +KE G E AL+
Sbjct: 539  HHEGRVAIGQAEPIPILVEVIRTGSPRNRENAAAVLWSLCTGDPLQLKLAKEHGAEAALQ 598

Query: 158  DLSENGTDRAKRKAANLLELLHR 90
            +LSENGTDRAKRKA ++LELL R
Sbjct: 599  ELSENGTDRAKRKAGSILELLQR 621


>ref|XP_002315320.1| predicted protein [Populus trichocarpa] gi|222864360|gb|EEF01491.1|
            predicted protein [Populus trichocarpa]
          Length = 628

 Score =  643 bits (1659), Expect = 0.0
 Identities = 332/440 (75%), Positives = 374/440 (85%), Gaps = 1/440 (0%)
 Frame = -1

Query: 1412 LQLRTINDLKKESLSLHEMVLSCGGDPGDCLEDMSALLKKLKDSVLTENPDADTSEGE-I 1236
            L L+TI+DLKKESL+ HE+V++ GGDPGD  + M++L KKLKD V   NP+AD S  E +
Sbjct: 179  LHLQTIDDLKKESLAFHELVIASGGDPGDWFKKMASLFKKLKDHVQMANPEADCSGAEKV 238

Query: 1235 FFKHRSPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIQKWLDAGHRTCPKTQQTLVHT 1056
              KHRSPVIPDDFRCPISLELMKDPVI+STGQTYERSCIQKWLDAGH+TCPKTQQTL+HT
Sbjct: 239  MMKHRSPVIPDDFRCPISLELMKDPVIISTGQTYERSCIQKWLDAGHKTCPKTQQTLLHT 298

Query: 1055 ALTPNYVLKSLISQWCESNGVELPKKQGECKNWKSSTSVSDCDRAAIDALLLKLSNRDPE 876
            ALTPNYVLKSLI+ WCESNGVELPK+ G C++    +S+S CDRAAI  LL KL+N + E
Sbjct: 299  ALTPNYVLKSLIALWCESNGVELPKQPGACRSKNVRSSISYCDRAAIATLLDKLANGNLE 358

Query: 875  DQRAAAGELRLLAKRNGDNRVCIAEAGAIPLLVELLSSPDSRTQEHAVTALLNLSINETN 696
             QR+AAGELRLLAKRN DNRVCIAEAGAIPLLVELLSS D RTQEHAVTALLNLSIN+ N
Sbjct: 359  QQRSAAGELRLLAKRNVDNRVCIAEAGAIPLLVELLSSTDPRTQEHAVTALLNLSINDIN 418

Query: 695  KVSIVNAGAIPDIVDVLKNGSMEARENAAATLFSLSVIDENKVXXXXXXXXXXXXXXLCH 516
            K +IVNAGAIPDIVDVLKNGSMEARENAAATLFSLSV+DENKV              LC 
Sbjct: 419  KGTIVNAGAIPDIVDVLKNGSMEARENAAATLFSLSVVDENKVAIGAAGAIPALIKLLCD 478

Query: 515  GSPRGKKDAATAIFNLSIYQGNKVRAVRAGIVVPLMRLLTDAAGGMVDEALAILAILASH 336
            G+PRGKKDAATAIFNLSIYQGNK RAV+AGIV PLMRLL DA GGMVDEALAILAILASH
Sbjct: 479  GTPRGKKDAATAIFNLSIYQGNKARAVKAGIVPPLMRLLKDAGGGMVDEALAILAILASH 538

Query: 335  QEGRVAIGQAEPTPVLVEVMRTGSPRNRENAAAVLWSLCTADGKHLKTSKECGVEEALKD 156
            QEG+VAIGQA+P PVL+EV+ TG PRNRENAAA+L SLCT D + LK +++ G E+ALK+
Sbjct: 539  QEGKVAIGQADPIPVLMEVISTGYPRNRENAAAILCSLCTVDSQQLKLARQFGAEKALKE 598

Query: 155  LSENGTDRAKRKAANLLELL 96
            LSE+GTDRAKRKA ++LELL
Sbjct: 599  LSESGTDRAKRKAGSILELL 618


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