BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009545
         (1290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36671.3| unnamed protein product [Vitis vinifera]               80   1e-12
ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotei...    79   3e-12
emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]    79   3e-12
ref|XP_004165711.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuc...    75   3e-11
ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotei...    75   3e-11

>emb|CBI36671.3| unnamed protein product [Vitis vinifera]
          Length = 1405

 Score = 80.1 bits (196), Expect = 1e-12
 Identities = 60/186 (32%), Positives = 96/186 (51%), Gaps = 1/186 (0%)
 Frame = -2

Query: 1238 ERGFYQPSTEATWEAYQALTSLIEAHLYRPNIPKEVMCGVADEILSVLKSTIINSPSGKK 1059
            E G YQP T+ T  AY+A+ S+I+  L     P  ++ G ADEIL+VLK+  + +P  KK
Sbjct: 109  EEGVYQPKTKETRAAYEAMLSVIQQQL--GGQPLNIVSGAADEILAVLKNETVKNPD-KK 165

Query: 1058 TEIERILSPIPDFAFNELLSVANLITDYYVARPLGKTDDRTALFTPEDNFYQPKSEDSCV 879
             EIER+L+PIP+  F++L+S+  LITD+       + ++   L   + + Y         
Sbjct: 166  KEIERLLNPIPNHIFDQLVSIGRLITDFQ-----DEANEGMTLNVQDIDAY--------- 211

Query: 878  PYKIFLDIVIDNIGSQQPQVVQC-VVAHEVLTILKNEDLGDTQKKVMLKSFLEDVSDDTY 702
                +L   I     QQ    QC  +A EVL IL   D  + + K+++      +  D +
Sbjct: 212  ----WLQRKISQAYEQQIDPQQCQKLAEEVLKILAEGDDREVETKLLV-----HLQFDKF 262

Query: 701  SMMLFI 684
            S++ F+
Sbjct: 263  SLIKFL 268


>ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase [Vitis
            vinifera]
          Length = 2177

 Score = 79.0 bits (193), Expect = 3e-12
 Identities = 41/88 (46%), Positives = 60/88 (68%)
 Frame = -2

Query: 1238 ERGFYQPSTEATWEAYQALTSLIEAHLYRPNIPKEVMCGVADEILSVLKSTIINSPSGKK 1059
            E G YQP T+ T  AY+A+ S+I+  L     P  ++ G ADEIL+VLK+  + +P  KK
Sbjct: 109  EEGVYQPKTKETRAAYEAMLSVIQQQL--GGQPLNIVSGAADEILAVLKNETVKNPD-KK 165

Query: 1058 TEIERILSPIPDFAFNELLSVANLITDY 975
             EIER+L+PIP+  F++L+S+  LITD+
Sbjct: 166  KEIERLLNPIPNHIFDQLVSIGRLITDF 193


>emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]
          Length = 2144

 Score = 79.0 bits (193), Expect = 3e-12
 Identities = 41/88 (46%), Positives = 60/88 (68%)
 Frame = -2

Query: 1238 ERGFYQPSTEATWEAYQALTSLIEAHLYRPNIPKEVMCGVADEILSVLKSTIINSPSGKK 1059
            E G YQP T+ T  AY+A+ S+I+  L     P  ++ G ADEIL+VLK+  + +P  KK
Sbjct: 109  EEGVYQPKTKETRAAYEAMLSVIQQQL--GGQPLNIVSGAADEILAVLKNETVKNPD-KK 165

Query: 1058 TEIERILSPIPDFAFNELLSVANLITDY 975
             EIER+L+PIP+  F++L+S+  LITD+
Sbjct: 166  KEIERLLNPIPNHIFDQLVSIGRLITDF 193


>ref|XP_004165711.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuclear ribonucleoprotein
            200 kDa helicase-like [Cucumis sativus]
          Length = 2175

 Score = 75.5 bits (184), Expect = 3e-11
 Identities = 40/88 (45%), Positives = 58/88 (65%)
 Frame = -2

Query: 1238 ERGFYQPSTEATWEAYQALTSLIEAHLYRPNIPKEVMCGVADEILSVLKSTIINSPSGKK 1059
            E G Y P T+ T  AY+A+ S+I+  L     P  ++ G ADEIL+VLK+    +P  KK
Sbjct: 108  EEGVYMPKTKETRAAYEAMLSVIQQQL--GGQPLSIVSGAADEILAVLKNDSFKNPD-KK 164

Query: 1058 TEIERILSPIPDFAFNELLSVANLITDY 975
             EIE++L+PIP+  F++L+S+  LITDY
Sbjct: 165  KEIEKLLNPIPNNVFDQLVSIGRLITDY 192


>ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
            [Cucumis sativus]
          Length = 2175

 Score = 75.5 bits (184), Expect = 3e-11
 Identities = 40/88 (45%), Positives = 58/88 (65%)
 Frame = -2

Query: 1238 ERGFYQPSTEATWEAYQALTSLIEAHLYRPNIPKEVMCGVADEILSVLKSTIINSPSGKK 1059
            E G Y P T+ T  AY+A+ S+I+  L     P  ++ G ADEIL+VLK+    +P  KK
Sbjct: 108  EEGVYMPKTKETRAAYEAMLSVIQQQL--GGQPLSIVSGAADEILAVLKNDSFKNPD-KK 164

Query: 1058 TEIERILSPIPDFAFNELLSVANLITDY 975
             EIE++L+PIP+  F++L+S+  LITDY
Sbjct: 165  KEIEKLLNPIPNNVFDQLVSIGRLITDY 192