BLASTX nr result

ID: Coptis23_contig00009537 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009537
         (1079 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266252.1| PREDICTED: putative oxidoreductase GLYR1 iso...   465   e-128
ref|XP_003528809.1| PREDICTED: putative oxidoreductase GLYR1-lik...   460   e-127
ref|NP_001233832.1| succinic semialdehyde reductase isofom1 [Sol...   456   e-126
dbj|BAJ91168.1| predicted protein [Hordeum vulgare subsp. vulgar...   455   e-126
gb|ACU22717.1| unknown [Glycine max]                                  455   e-126

>ref|XP_002266252.1| PREDICTED: putative oxidoreductase GLYR1 isoform 1 [Vitis vinifera]
           gi|147861759|emb|CAN78910.1| hypothetical protein
           VITISV_032948 [Vitis vinifera]
           gi|297736660|emb|CBI25677.3| unnamed protein product
           [Vitis vinifera]
          Length = 291

 Score =  465 bits (1196), Expect = e-128
 Identities = 239/290 (82%), Positives = 257/290 (88%)
 Frame = -3

Query: 978 MEVGFLGLGIMGKAMALNLLRHGFKVTVWNRTLSKCDELLEHGASVGSTPAEVVKKCKYT 799
           MEVGFLGLGIMGKAM++NL+R GFK+TVWNRTLSKCDEL+E GAS+G TPA VVKKC YT
Sbjct: 1   MEVGFLGLGIMGKAMSINLIRSGFKLTVWNRTLSKCDELVELGASIGETPAAVVKKCNYT 60

Query: 798 IGMLSDPSAALSVVFDKDGVLEQIGEGKCYIDMSTVDADTSSKISEAITKKGGYFLEAPV 619
           I MLSDPS ALSVVFDKDGVLEQI  GK YIDMSTV ADTSSKISEAIT KGG FLEAPV
Sbjct: 61  IAMLSDPSVALSVVFDKDGVLEQICHGKGYIDMSTVGADTSSKISEAITSKGGSFLEAPV 120

Query: 618 SGSKKPAEDGQLVILAAGEKSLYEEAIPAFDVMGKKSFYLGEVGNGAKMKLVVNMIMGSM 439
           SGSKKPAEDGQLVILAAGEK+LY+EAIPAFD+MGKKSF+LG+VGNGAKMKLVVNMIMGSM
Sbjct: 121 SGSKKPAEDGQLVILAAGEKALYDEAIPAFDIMGKKSFFLGQVGNGAKMKLVVNMIMGSM 180

Query: 438 MSAFSEGLVLADKSGLSQQTLLDVLDLGGMANPMFKMKGPGMIQNSYPPAFPLKHQQKDM 259
           M+AFSEGLVLAD+SGL+  TLLDVLDLGG+ANPMF++KGP MIQN+Y PAFPLKHQQKDM
Sbjct: 181 MNAFSEGLVLADRSGLNPHTLLDVLDLGGIANPMFRLKGPTMIQNNYSPAFPLKHQQKDM 240

Query: 258 RLALALGDETAVSMPVXXXXXXXXXXARSLGLGDNDFSAVYEAVKVQERS 109
           RLALALGDE AVSMPV          ARSLGLGD DFSAVYE VK  E S
Sbjct: 241 RLALALGDENAVSMPVAAAANEAFKKARSLGLGDLDFSAVYETVKTLEHS 290


>ref|XP_003528809.1| PREDICTED: putative oxidoreductase GLYR1-like [Glycine max]
          Length = 290

 Score =  460 bits (1183), Expect = e-127
 Identities = 233/290 (80%), Positives = 256/290 (88%)
 Frame = -3

Query: 978 MEVGFLGLGIMGKAMALNLLRHGFKVTVWNRTLSKCDELLEHGASVGSTPAEVVKKCKYT 799
           ME GFLGLGIMGKAMA+NLLRHGFKVT+WNRTLSKCDEL++HGASVG TPA VVKKCKYT
Sbjct: 1   MEFGFLGLGIMGKAMAINLLRHGFKVTIWNRTLSKCDELVQHGASVGETPATVVKKCKYT 60

Query: 798 IGMLSDPSAALSVVFDKDGVLEQIGEGKCYIDMSTVDADTSSKISEAITKKGGYFLEAPV 619
           I MLSDPSAALSVVFDKDGVLE I  GKCYIDMSTVDADTSSKISE I  KGGYFLEAPV
Sbjct: 61  IAMLSDPSAALSVVFDKDGVLEHIN-GKCYIDMSTVDADTSSKISETIKAKGGYFLEAPV 119

Query: 618 SGSKKPAEDGQLVILAAGEKSLYEEAIPAFDVMGKKSFYLGEVGNGAKMKLVVNMIMGSM 439
           SGSKKPAEDGQL+ILAAG+K+LY+E +PAFDV+GKKSF+LGEVGNGAKMKLVVNMIMGSM
Sbjct: 120 SGSKKPAEDGQLIILAAGDKALYDEVLPAFDVLGKKSFFLGEVGNGAKMKLVVNMIMGSM 179

Query: 438 MSAFSEGLVLADKSGLSQQTLLDVLDLGGMANPMFKMKGPGMIQNSYPPAFPLKHQQKDM 259
           M+AFSEGL LA++SGL+  TLLDVLDLG ++N MFK+KGP M+QNSY PAFPLKHQQKDM
Sbjct: 180 MNAFSEGLTLAERSGLNPGTLLDVLDLGAISNGMFKLKGPTMLQNSYSPAFPLKHQQKDM 239

Query: 258 RLALALGDETAVSMPVXXXXXXXXXXARSLGLGDNDFSAVYEAVKVQERS 109
           RLALALGDE AVSMPV          ARS+GLGD DFSAV+E +K  + S
Sbjct: 240 RLALALGDENAVSMPVAAAANEAFKKARSMGLGDLDFSAVHETLKAPDHS 289


>ref|NP_001233832.1| succinic semialdehyde reductase isofom1 [Solanum lycopersicum]
           gi|171854589|dbj|BAG16485.1| succinic semialdehyde
           reductase isofom1 [Solanum lycopersicum]
          Length = 287

 Score =  456 bits (1173), Expect = e-126
 Identities = 228/283 (80%), Positives = 252/283 (89%)
 Frame = -3

Query: 975 EVGFLGLGIMGKAMALNLLRHGFKVTVWNRTLSKCDELLEHGASVGSTPAEVVKKCKYTI 796
           E+GFLG+GIMGKAMA+NLLRHGFKVTVWNRTLS+CDEL++HGASVG TPAEV+KKCKYTI
Sbjct: 3   EIGFLGIGIMGKAMAVNLLRHGFKVTVWNRTLSRCDELVQHGASVGETPAEVIKKCKYTI 62

Query: 795 GMLSDPSAALSVVFDKDGVLEQIGEGKCYIDMSTVDADTSSKISEAITKKGGYFLEAPVS 616
            MLSDP+AALSVVFDK G LE I  GK YIDMSTVDADTSS+IS+AIT KGG FLEAPVS
Sbjct: 63  AMLSDPAAALSVVFDKHGALEHICAGKGYIDMSTVDADTSSQISQAITSKGGSFLEAPVS 122

Query: 615 GSKKPAEDGQLVILAAGEKSLYEEAIPAFDVMGKKSFYLGEVGNGAKMKLVVNMIMGSMM 436
           GSKKPAEDGQLVILAAG+K LY++ +PAFDV+GKKSF+LG++GNGAKMKLVVNMIMGSMM
Sbjct: 123 GSKKPAEDGQLVILAAGDKDLYDQVVPAFDVLGKKSFFLGKIGNGAKMKLVVNMIMGSMM 182

Query: 435 SAFSEGLVLADKSGLSQQTLLDVLDLGGMANPMFKMKGPGMIQNSYPPAFPLKHQQKDMR 256
           +AFSEG+VLADKSGL   TLLDVLDLG +ANPMFKMKGP MI+NSYPPAFPLKHQQKDMR
Sbjct: 183 NAFSEGIVLADKSGLDPHTLLDVLDLGAIANPMFKMKGPAMIKNSYPPAFPLKHQQKDMR 242

Query: 255 LALALGDETAVSMPVXXXXXXXXXXARSLGLGDNDFSAVYEAV 127
           LALALGDE AV MPV          ARSLGLGD DFSAV+E +
Sbjct: 243 LALALGDENAVPMPVAAAANEAFKKARSLGLGDLDFSAVFETL 285


>dbj|BAJ91168.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326518654|dbj|BAJ88356.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 291

 Score =  455 bits (1171), Expect = e-126
 Identities = 231/285 (81%), Positives = 253/285 (88%)
 Frame = -3

Query: 978 MEVGFLGLGIMGKAMALNLLRHGFKVTVWNRTLSKCDELLEHGASVGSTPAEVVKKCKYT 799
           MEVGFLGLGIMGKAMA NLLRHGF+VTVWNRTLSKCDEL+  GA+VG TPA VV KCKYT
Sbjct: 1   MEVGFLGLGIMGKAMAANLLRHGFRVTVWNRTLSKCDELVAMGAAVGDTPASVVAKCKYT 60

Query: 798 IGMLSDPSAALSVVFDKDGVLEQIGEGKCYIDMSTVDADTSSKISEAITKKGGYFLEAPV 619
           I MLSDPSAALSVVFDKDGVLEQIGEGK Y+DMSTVDA TS KISEA+ +KGG F+EAPV
Sbjct: 61  IAMLSDPSAALSVVFDKDGVLEQIGEGKGYVDMSTVDAATSCKISEAVKQKGGAFVEAPV 120

Query: 618 SGSKKPAEDGQLVILAAGEKSLYEEAIPAFDVMGKKSFYLGEVGNGAKMKLVVNMIMGSM 439
           SGSKKPAEDGQLVILAAG+K+LY++ +PAFD++GKKSF+LGE+GNGAKMKLVVNMIMGSM
Sbjct: 121 SGSKKPAEDGQLVILAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKLVVNMIMGSM 180

Query: 438 MSAFSEGLVLADKSGLSQQTLLDVLDLGGMANPMFKMKGPGMIQNSYPPAFPLKHQQKDM 259
           M+AFSEGL LADKSGLS QTLLDVLDLG +ANPMFKMKGP M+Q SY PAFPLKHQQKDM
Sbjct: 181 MNAFSEGLCLADKSGLSPQTLLDVLDLGAIANPMFKMKGPSMLQGSYNPAFPLKHQQKDM 240

Query: 258 RLALALGDETAVSMPVXXXXXXXXXXARSLGLGDNDFSAVYEAVK 124
           RLAL+LGDE AVSMPV          ARSLGLGD DFSAV+E +K
Sbjct: 241 RLALSLGDENAVSMPVAAAANEAFKKARSLGLGDLDFSAVHEVLK 285


>gb|ACU22717.1| unknown [Glycine max]
          Length = 290

 Score =  455 bits (1171), Expect = e-126
 Identities = 231/290 (79%), Positives = 255/290 (87%)
 Frame = -3

Query: 978 MEVGFLGLGIMGKAMALNLLRHGFKVTVWNRTLSKCDELLEHGASVGSTPAEVVKKCKYT 799
           ME GFLGLGIMGKAMA+NLLRHGFKVT+WNRTLSKCDEL++HGASVG TPA VVKKCKYT
Sbjct: 1   MEFGFLGLGIMGKAMAINLLRHGFKVTIWNRTLSKCDELVQHGASVGETPATVVKKCKYT 60

Query: 798 IGMLSDPSAALSVVFDKDGVLEQIGEGKCYIDMSTVDADTSSKISEAITKKGGYFLEAPV 619
           I MLSDPSAALSVVFDKDGVLE I  GKCYIDMSTVDADTSSKISE I  KGGYFLEAPV
Sbjct: 61  IAMLSDPSAALSVVFDKDGVLEHIN-GKCYIDMSTVDADTSSKISETIKAKGGYFLEAPV 119

Query: 618 SGSKKPAEDGQLVILAAGEKSLYEEAIPAFDVMGKKSFYLGEVGNGAKMKLVVNMIMGSM 439
           SGSKKPAEDGQL+ILAAG+K+LY+E +PAFDV+GKKSF+LGEVGNGAKMKLVVN+IMGSM
Sbjct: 120 SGSKKPAEDGQLIILAAGDKALYDEVLPAFDVLGKKSFFLGEVGNGAKMKLVVNVIMGSM 179

Query: 438 MSAFSEGLVLADKSGLSQQTLLDVLDLGGMANPMFKMKGPGMIQNSYPPAFPLKHQQKDM 259
           M+AFSEGL LA++SGL+  TLLDVLDLG ++N MFK+KGP M+QNSY PAFPLK QQKDM
Sbjct: 180 MNAFSEGLTLAERSGLNPGTLLDVLDLGAISNGMFKLKGPTMLQNSYSPAFPLKRQQKDM 239

Query: 258 RLALALGDETAVSMPVXXXXXXXXXXARSLGLGDNDFSAVYEAVKVQERS 109
           RLALALGDE AVSMPV          ARS+GLGD DFSAV+E +K  + S
Sbjct: 240 RLALALGDENAVSMPVAAAANEAFKKARSMGLGDLDFSAVHETLKAPDHS 289


Top