BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009518
         (1233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q06364.2|PSMD3_DAUCA RecName: Full=Probable 26S proteasome no...   623   e-176
ref|XP_002279715.1| PREDICTED: probable 26S proteasome non-ATPas...   619   e-175
ref|XP_003527532.1| PREDICTED: probable 26S proteasome non-ATPas...   603   e-170
ref|XP_002285893.1| PREDICTED: probable 26S proteasome non-ATPas...   602   e-170
ref|XP_002521275.1| 26S proteasome regulatory subunit S3, putati...   601   e-169

>sp|Q06364.2|PSMD3_DAUCA RecName: Full=Probable 26S proteasome non-ATPase regulatory subunit
            3; Short=26S proteasome subunit S3; AltName: Full=26S
            proteasome regulatory subunit RPN3; AltName: Full=Nuclear
            antigen 21D7
          Length = 489

 Score =  623 bits (1606), Expect = e-176
 Identities = 327/409 (79%), Positives = 355/409 (86%), Gaps = 2/409 (0%)
 Frame = -3

Query: 1222 MTQDVEMKEXXXXXXXXXXXXXXXXTLQQLKEIASLIENGTYEKEVRKIVRAIRFTIVLR 1043
            MTQDVEMKE                TLQ LKEIASLIE+G Y +EVR+I+RA+R TI LR
Sbjct: 1    MTQDVEMKEVPAPAPSNSVTAATPSTLQHLKEIASLIESGAYAREVRRILRAVRLTIALR 60

Query: 1042 KKLKPSLLHAFLNYALIPGSEAHTRLSAYLPKDDEQDMEVDTATSATSV--KQSLPELEI 869
            KKL  S+++AFLN++L+PGSE H RL++YLPK+DE DMEVDTA SAT+   K SLPELEI
Sbjct: 61   KKLNASVVNAFLNFSLVPGSEVHARLASYLPKEDEHDMEVDTAMSATTTLAKHSLPELEI 120

Query: 868  YCYLLVLIFLIDQKRLSEAKACSSASIARLRNMSRRTVDVLASRLFFYYSLSYELTGDLA 689
            YCYLLVLIFLIDQK+ SEAKACSSASIAR++N++RRTV+VLASRL+FYYSLSYELTGDLA
Sbjct: 121  YCYLLVLIFLIDQKKYSEAKACSSASIARVKNLNRRTVEVLASRLYFYYSLSYELTGDLA 180

Query: 688  EIRGNLLALHRIATLRHDELGQETXXXXXXXXXXXXXXYDQAEKLRSKAPRFEAHSNQQF 509
            EIRGNLLALHRIATLRHDELGQET              YDQAEKLRSKAPRFEAHSNQQF
Sbjct: 181  EIRGNLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQF 240

Query: 508  CRYLFYLGKIRTIQLEYTDAKESLLQAARKAPASALGFRVQCNKWAVIVRLLLGEIPERT 329
            CRYLFYLGKIRTIQLEYTDAKES LQAARKAP +ALGFRVQCNKWAVIVRLLLGEIPERT
Sbjct: 241  CRYLFYLGKIRTIQLEYTDAKESXLQAARKAPVAALGFRVQCNKWAVIVRLLLGEIPERT 300

Query: 328  VFMQKGMKKALRPYFELTNAVRVGDLELFRNVADKFASTFNSDRTHNLIVRLRHNVIRTG 149
            VFMQKGM+KALRPYF LTNAVR+GDLELFR VADKFASTF +DRTHNLIVRLRHNVIRTG
Sbjct: 301  VFMQKGMEKALRPYFXLTNAVRIGDLELFRXVADKFASTFTADRTHNLIVRLRHNVIRTG 360

Query: 148  LRNISISYSRISLKDVADKLRLNSENPVADAESIVAKAIRDGAIDATID 2
            LRNISISYSRISL DVA KLRL+S NPVADAESIV+KAIRDGAIDATID
Sbjct: 361  LRNISISYSRISLVDVARKLRLDSPNPVADAESIVSKAIRDGAIDATID 409


>ref|XP_002279715.1| PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 3
            [Vitis vinifera]
          Length = 487

 Score =  619 bits (1595), Expect = e-175
 Identities = 325/409 (79%), Positives = 353/409 (86%), Gaps = 2/409 (0%)
 Frame = -3

Query: 1222 MTQDVEMKEXXXXXXXXXXXXXXXXTLQQLKEIASLIENGTYEKEVRKIVRAIRFTIVLR 1043
            MTQDVEMKE                 LQ LKEIASLIE+  Y +EVR+IVRAIR T++LR
Sbjct: 1    MTQDVEMKELPAPSNSVTSTTPST--LQHLKEIASLIESSAYAREVRRIVRAIRLTMILR 58

Query: 1042 KKLKPSLLHAFLNYALIPGSEAHTRLSAYLPKDDEQDMEVDTATSATSV--KQSLPELEI 869
            +KLK ++L  FLNYAL PGSE HTRLS+YLPK+DE DMEVDTATSAT    K  LPELEI
Sbjct: 59   RKLKATVLSGFLNYALNPGSEVHTRLSSYLPKEDEHDMEVDTATSATQTPAKHPLPELEI 118

Query: 868  YCYLLVLIFLIDQKRLSEAKACSSASIARLRNMSRRTVDVLASRLFFYYSLSYELTGDLA 689
            YCYLLVLIFLIDQK+  EAKACS+ASI RL+N++RRT+DVLASRL+ YYSLSYELTGDLA
Sbjct: 119  YCYLLVLIFLIDQKKYKEAKACSAASITRLKNLNRRTIDVLASRLYSYYSLSYELTGDLA 178

Query: 688  EIRGNLLALHRIATLRHDELGQETXXXXXXXXXXXXXXYDQAEKLRSKAPRFEAHSNQQF 509
            EIRGNLLALHRIATLRHDELGQET              YDQAEKLRSKAPRFEAHSNQQF
Sbjct: 179  EIRGNLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQF 238

Query: 508  CRYLFYLGKIRTIQLEYTDAKESLLQAARKAPASALGFRVQCNKWAVIVRLLLGEIPERT 329
            CRYLFYLGKIRTIQLEYTDAKESLLQAARKAP SALGFRVQCNKWAVIVRLLLGEIPERT
Sbjct: 239  CRYLFYLGKIRTIQLEYTDAKESLLQAARKAPVSALGFRVQCNKWAVIVRLLLGEIPERT 298

Query: 328  VFMQKGMKKALRPYFELTNAVRVGDLELFRNVADKFASTFNSDRTHNLIVRLRHNVIRTG 149
            VFMQKGM+KALRPYFELTNAVR+GDLELF++VA+KF++TF+SDRTHNLIVRLRHNVIRTG
Sbjct: 299  VFMQKGMEKALRPYFELTNAVRIGDLELFKSVAEKFSTTFSSDRTHNLIVRLRHNVIRTG 358

Query: 148  LRNISISYSRISLKDVADKLRLNSENPVADAESIVAKAIRDGAIDATID 2
            LRNISISYSRISL DVA KLRL+S NP+ADAESIVAKAIRDGAIDAT+D
Sbjct: 359  LRNISISYSRISLADVAQKLRLDSANPIADAESIVAKAIRDGAIDATLD 407


>ref|XP_003527532.1| PREDICTED: probable 26S proteasome non-ATPase regulatory subunit
            3-like [Glycine max]
          Length = 487

 Score =  603 bits (1556), Expect = e-170
 Identities = 316/409 (77%), Positives = 346/409 (84%), Gaps = 2/409 (0%)
 Frame = -3

Query: 1222 MTQDVEMKEXXXXXXXXXXXXXXXXTLQQLKEIASLIENGTYEKEVRKIVRAIRFTIVLR 1043
            MTQD+EMK+                 LQ LKEIASLIE G+Y KEVR+I RA+R TI LR
Sbjct: 1    MTQDLEMKDRSTPSNSVSSPAPST--LQHLKEIASLIETGSYSKEVRRIARAVRLTIALR 58

Query: 1042 KKLKPSLLHAFLNYALIPGSEAHTRLSAYLPKDDEQDMEVDTATSA--TSVKQSLPELEI 869
            +KL  S + +FL++ L PGSE H +LSAYLPKDD+ +MEVD ATSA  T  K  LPELEI
Sbjct: 59   RKLTASAISSFLDHVLTPGSEVHAKLSAYLPKDDDHEMEVDAATSAIQTPAKHLLPELEI 118

Query: 868  YCYLLVLIFLIDQKRLSEAKACSSASIARLRNMSRRTVDVLASRLFFYYSLSYELTGDLA 689
            YCYLLVL+FLIDQK+ SEAKACSSASI  L+N++RRTVDV+ASRL+FYYS SYEL GDLA
Sbjct: 119  YCYLLVLLFLIDQKKYSEAKACSSASIVWLKNINRRTVDVIASRLYFYYSYSYELMGDLA 178

Query: 688  EIRGNLLALHRIATLRHDELGQETXXXXXXXXXXXXXXYDQAEKLRSKAPRFEAHSNQQF 509
            EIRGNLLALHRIATLRHDELGQET              YDQAEKLRSKAPRFEAHSNQQF
Sbjct: 179  EIRGNLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQF 238

Query: 508  CRYLFYLGKIRTIQLEYTDAKESLLQAARKAPASALGFRVQCNKWAVIVRLLLGEIPERT 329
            CRYLFYLGKIRTIQLEYTDAKESLLQAARKAP +A GFR+QCNKWAVIVRLLLGEIPERT
Sbjct: 239  CRYLFYLGKIRTIQLEYTDAKESLLQAARKAPVAARGFRIQCNKWAVIVRLLLGEIPERT 298

Query: 328  VFMQKGMKKALRPYFELTNAVRVGDLELFRNVADKFASTFNSDRTHNLIVRLRHNVIRTG 149
            VFMQKGM+KALRPYFELTNAVR+GDLELFRN+ADKFA+TFN+DRTHNLIVRLRHNVIRTG
Sbjct: 299  VFMQKGMEKALRPYFELTNAVRIGDLELFRNIADKFATTFNADRTHNLIVRLRHNVIRTG 358

Query: 148  LRNISISYSRISLKDVADKLRLNSENPVADAESIVAKAIRDGAIDATID 2
            LRNISISYSRISL DVA KLRLNS +PVADAESIV+KAIRDGAIDAT+D
Sbjct: 359  LRNISISYSRISLADVAKKLRLNSASPVADAESIVSKAIRDGAIDATLD 407


>ref|XP_002285893.1| PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 3
            [Vitis vinifera] gi|302141730|emb|CBI18933.3| unnamed
            protein product [Vitis vinifera]
          Length = 487

 Score =  602 bits (1551), Expect = e-170
 Identities = 316/409 (77%), Positives = 348/409 (85%), Gaps = 2/409 (0%)
 Frame = -3

Query: 1222 MTQDVEMKEXXXXXXXXXXXXXXXXTLQQLKEIASLIENGTYEKEVRKIVRAIRFTIVLR 1043
            MTQDVEMK+                 L QLKEIASLIE G+Y KEVR+IVRAIR T+ LR
Sbjct: 1    MTQDVEMKDRTAPSNSVSSTGPST--LHQLKEIASLIETGSYTKEVRRIVRAIRLTMALR 58

Query: 1042 KKLKPSLLHAFLNYALIPGSEAHTRLSAYLPKDDEQDMEVDTATSATS--VKQSLPELEI 869
            +KLK  +L AFL++AL+P SEAH+RLSAYLPK+DE DMEVDTATSA    VK  +PELEI
Sbjct: 59   RKLKVPVLSAFLDFALVPVSEAHSRLSAYLPKEDEHDMEVDTATSADQAPVKHLVPELEI 118

Query: 868  YCYLLVLIFLIDQKRLSEAKACSSASIARLRNMSRRTVDVLASRLFFYYSLSYELTGDLA 689
            YCYLLVL+FLIDQK+ +EAKACSSASI RL+N++RRTVDVLAS+L+ YYS SYELTG LA
Sbjct: 119  YCYLLVLVFLIDQKKYNEAKACSSASIVRLKNLNRRTVDVLASKLYLYYSYSYELTGHLA 178

Query: 688  EIRGNLLALHRIATLRHDELGQETXXXXXXXXXXXXXXYDQAEKLRSKAPRFEAHSNQQF 509
            EIRGNLL LHRI TLRHDELGQET              YDQAEKLRSKAPRFEAHSNQQF
Sbjct: 179  EIRGNLLGLHRITTLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQF 238

Query: 508  CRYLFYLGKIRTIQLEYTDAKESLLQAARKAPASALGFRVQCNKWAVIVRLLLGEIPERT 329
            CRYLFYLGKIRTIQLEYTDAKESLLQAARKAPA+A GFR+QCNKWA+IVRLLLGEIPERT
Sbjct: 239  CRYLFYLGKIRTIQLEYTDAKESLLQAARKAPAAARGFRIQCNKWAIIVRLLLGEIPERT 298

Query: 328  VFMQKGMKKALRPYFELTNAVRVGDLELFRNVADKFASTFNSDRTHNLIVRLRHNVIRTG 149
            VFMQKGM+KALRPYFELTNAVR+GDLELFR+VA+KFA TF++DR HNLIVRLRHNVIRTG
Sbjct: 299  VFMQKGMEKALRPYFELTNAVRIGDLELFRSVAEKFAGTFSTDRIHNLIVRLRHNVIRTG 358

Query: 148  LRNISISYSRISLKDVADKLRLNSENPVADAESIVAKAIRDGAIDATID 2
            LRNISISYSRISL D+A KLRL+S NPVADAESIVAKAI DGAIDAT+D
Sbjct: 359  LRNISISYSRISLADIASKLRLDSANPVADAESIVAKAIHDGAIDATLD 407


>ref|XP_002521275.1| 26S proteasome regulatory subunit S3, putative [Ricinus communis]
            gi|223539543|gb|EEF41131.1| 26S proteasome regulatory
            subunit S3, putative [Ricinus communis]
          Length = 491

 Score =  601 bits (1550), Expect = e-169
 Identities = 315/411 (76%), Positives = 350/411 (85%), Gaps = 4/411 (0%)
 Frame = -3

Query: 1222 MTQDVEMKEXXXXXXXXXXXXXXXXT--LQQLKEIASLIENGTYEKEVRKIVRAIRFTIV 1049
            MTQDVEMKE                   LQ LKEIASLIE G Y +EVR+IVRA+R T+ 
Sbjct: 1    MTQDVEMKEVPAAAAAPSNSTTSSSPSTLQHLKEIASLIETGAYAREVRRIVRAVRLTMA 60

Query: 1048 LRKKLKPSLLHAFLNYALIPGSEAHTRLSAYLPKDDEQDMEVDTATSATSV--KQSLPEL 875
            LR+KLK  LL AFLN  L PGS+ +TRLS++LPK+D+ +MEVDTATS T    K  LPEL
Sbjct: 61   LRRKLKAQLLSAFLNSILTPGSDPYTRLSSFLPKEDDHEMEVDTATSVTQAPAKHPLPEL 120

Query: 874  EIYCYLLVLIFLIDQKRLSEAKACSSASIARLRNMSRRTVDVLASRLFFYYSLSYELTGD 695
            E+YCYLLVLI+LIDQK+ +EAKACS+A IARL+N++RRTVDVLASRL+FYYSLSYELTGD
Sbjct: 121  EMYCYLLVLIYLIDQKKYNEAKACSTACIARLKNLNRRTVDVLASRLYFYYSLSYELTGD 180

Query: 694  LAEIRGNLLALHRIATLRHDELGQETXXXXXXXXXXXXXXYDQAEKLRSKAPRFEAHSNQ 515
            LAEIRGNLLALHRIATLRHDELGQET              YDQAEKLRSKAPRFEAHSNQ
Sbjct: 181  LAEIRGNLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQ 240

Query: 514  QFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPASALGFRVQCNKWAVIVRLLLGEIPE 335
            QFCRYLFYLGKIRTIQLEYTDAKESLLQAARK+P +ALGFRVQCNKWA+IVRLLLGEIPE
Sbjct: 241  QFCRYLFYLGKIRTIQLEYTDAKESLLQAARKSPVAALGFRVQCNKWAIIVRLLLGEIPE 300

Query: 334  RTVFMQKGMKKALRPYFELTNAVRVGDLELFRNVADKFASTFNSDRTHNLIVRLRHNVIR 155
            RTVFMQKGM+KALRPYFELTNAVR+GDLELF++VA+KF++ F++DRTHNLIVRLRHNVIR
Sbjct: 301  RTVFMQKGMEKALRPYFELTNAVRIGDLELFKSVAEKFSTIFSADRTHNLIVRLRHNVIR 360

Query: 154  TGLRNISISYSRISLKDVADKLRLNSENPVADAESIVAKAIRDGAIDATID 2
            TGLRNISISYSRISL DVA KLRL+S NPVADAESIVAKAIRDGAIDAT+D
Sbjct: 361  TGLRNISISYSRISLADVAKKLRLDSANPVADAESIVAKAIRDGAIDATLD 411