BLASTX nr result

ID: Coptis23_contig00009507 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009507
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283428.1| PREDICTED: vacuolar protein sorting-associat...   112   2e-23
ref|XP_002881559.1| hypothetical protein ARALYDRAFT_321506 [Arab...   112   4e-23
dbj|BAJ33734.1| unnamed protein product [Thellungiella halophila]     111   5e-23
ref|NP_001078020.1| vacuoleless1 (VCL1) [Arabidopsis thaliana] g...   111   5e-23
ref|NP_565879.1| vacuoleless1 (VCL1) [Arabidopsis thaliana] gi|1...   111   5e-23

>ref|XP_002283428.1| PREDICTED: vacuolar protein sorting-associated protein 16 homolog
           [Vitis vinifera] gi|302143532|emb|CBI22093.3| unnamed
           protein product [Vitis vinifera]
          Length = 838

 Score =  112 bits (281), Expect = 2e-23
 Identities = 50/61 (81%), Positives = 54/61 (88%)
 Frame = +2

Query: 71  SLESALPPKQIAWCGLHSVLLYWHDNLLMVGPYGDPVNYFYDEPVILIPECDGVRILSNT 250
           S ESALPP Q++WCG+ SVLLYW D LLMVGPYGDPV Y YDEP+ILIPECDGVRILSNT
Sbjct: 257 SCESALPPDQLSWCGMDSVLLYWDDMLLMVGPYGDPVRYLYDEPIILIPECDGVRILSNT 316

Query: 251 S 253
           S
Sbjct: 317 S 317


>ref|XP_002881559.1| hypothetical protein ARALYDRAFT_321506 [Arabidopsis lyrata subsp.
           lyrata] gi|297327398|gb|EFH57818.1| hypothetical protein
           ARALYDRAFT_321506 [Arabidopsis lyrata subsp. lyrata]
          Length = 858

 Score =  112 bits (279), Expect = 4e-23
 Identities = 49/59 (83%), Positives = 56/59 (94%)
 Frame = +2

Query: 77  ESALPPKQIAWCGLHSVLLYWHDNLLMVGPYGDPVNYFYDEPVILIPECDGVRILSNTS 253
           ESALPP+Q+AWCG+ SVLLYW ++L+MVGP GDPV+YFYDEPVILIPECDGVRILSNTS
Sbjct: 281 ESALPPQQMAWCGMDSVLLYWDEDLMMVGPVGDPVHYFYDEPVILIPECDGVRILSNTS 339


>dbj|BAJ33734.1| unnamed protein product [Thellungiella halophila]
          Length = 833

 Score =  111 bits (278), Expect = 5e-23
 Identities = 49/61 (80%), Positives = 57/61 (93%)
 Frame = +2

Query: 71  SLESALPPKQIAWCGLHSVLLYWHDNLLMVGPYGDPVNYFYDEPVILIPECDGVRILSNT 250
           S ESALPP+Q+AWCG+ SVLLYW ++L+MVGP G+PV+YFYDEPVILIPECDGVRILSNT
Sbjct: 254 SCESALPPQQMAWCGMDSVLLYWDEDLMMVGPLGEPVHYFYDEPVILIPECDGVRILSNT 313

Query: 251 S 253
           S
Sbjct: 314 S 314


>ref|NP_001078020.1| vacuoleless1 (VCL1) [Arabidopsis thaliana]
           gi|330254386|gb|AEC09480.1| vacuoleless1 (VCL1)
           [Arabidopsis thaliana]
          Length = 834

 Score =  111 bits (278), Expect = 5e-23
 Identities = 48/61 (78%), Positives = 57/61 (93%)
 Frame = +2

Query: 71  SLESALPPKQIAWCGLHSVLLYWHDNLLMVGPYGDPVNYFYDEPVILIPECDGVRILSNT 250
           S ESALPP+Q+AWCG+ SVLLYW ++L+MVGP GDPV+YFYDEP+ILIPECDGVRILSNT
Sbjct: 279 SCESALPPQQMAWCGMDSVLLYWDEDLMMVGPVGDPVHYFYDEPIILIPECDGVRILSNT 338

Query: 251 S 253
           +
Sbjct: 339 N 339


>ref|NP_565879.1| vacuoleless1 (VCL1) [Arabidopsis thaliana]
           gi|13877133|gb|AAK43713.1|AF359240_1 VCL1 [Arabidopsis
           thaliana] gi|15081711|gb|AAK82510.1| At2g38020/T8P21.7
           [Arabidopsis thaliana] gi|22655028|gb|AAM98105.1|
           At2g38020/T8P21.7 [Arabidopsis thaliana]
           gi|330254385|gb|AEC09479.1| vacuoleless1 (VCL1)
           [Arabidopsis thaliana]
          Length = 858

 Score =  111 bits (278), Expect = 5e-23
 Identities = 48/61 (78%), Positives = 57/61 (93%)
 Frame = +2

Query: 71  SLESALPPKQIAWCGLHSVLLYWHDNLLMVGPYGDPVNYFYDEPVILIPECDGVRILSNT 250
           S ESALPP+Q+AWCG+ SVLLYW ++L+MVGP GDPV+YFYDEP+ILIPECDGVRILSNT
Sbjct: 279 SCESALPPQQMAWCGMDSVLLYWDEDLMMVGPVGDPVHYFYDEPIILIPECDGVRILSNT 338

Query: 251 S 253
           +
Sbjct: 339 N 339


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