BLASTX nr result

ID: Coptis23_contig00009501 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009501
         (1902 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272745.1| PREDICTED: F-box/kelch-repeat protein At1g67...   578   e-162
ref|XP_003531188.1| PREDICTED: F-box/kelch-repeat protein At1g67...   560   e-157
ref|XP_003538556.1| PREDICTED: F-box/kelch-repeat protein At1g67...   556   e-156
ref|XP_002514931.1| Protein AFR, putative [Ricinus communis] gi|...   546   e-153
ref|XP_002327284.1| predicted protein [Populus trichocarpa] gi|2...   538   e-150

>ref|XP_002272745.1| PREDICTED: F-box/kelch-repeat protein At1g67480 [Vitis vinifera]
            gi|297738424|emb|CBI27625.3| unnamed protein product
            [Vitis vinifera]
          Length = 385

 Score =  578 bits (1489), Expect = e-162
 Identities = 281/388 (72%), Positives = 313/388 (80%)
 Frame = -1

Query: 1350 MPGFVTGKNQLIESEMCFSTKVQKVLPTPPKTNRQLTPQVSDEFYNPILPGLSDDVAKHC 1171
            MPG V GK +  +S MC S  VQ+   T  K+N  LT Q +D+ Y PILPGL DDVAK+C
Sbjct: 1    MPGIVAGKKRFTQSNMCLSNSVQQDTLTLSKSNPCLTSQFADDSYGPILPGLPDDVAKYC 60

Query: 1170 LALVPRSNLPAMGAVCKPWRSFIQSKEFVSVRKQIGKLEEWLYVLTADAQGKGRHWEILG 991
            LALVPRSN PAMG V K WRSFI+SKEF++VRK  G LEEWLYVLT DA+GKG HWE+L 
Sbjct: 61   LALVPRSNFPAMGGVSKKWRSFIRSKEFITVRKLAGMLEEWLYVLTMDAEGKGSHWEVLD 120

Query: 990  CLGHDRQLLPTMPGPERAGFGXXXXXXXXXXXAGYFVDEGTACVSTDVYQYDSCLNSWST 811
            CLGH  QLLP MPGP + GF            AG  V   T   S DVYQYDSCLNSWS 
Sbjct: 121  CLGHKHQLLPPMPGPVKTGFEVVVLNGKLLVMAGCSVVGRTGSASADVYQYDSCLNSWSK 180

Query: 810  LATMNVARYDFACAEVNGMVYAVGGHGSNGESLSSAEVYDPENNEWILIESLRRPRWGCF 631
            LA MNVARYDFACAEVNGMVYAVGG+G++G+SLSSAE+YD + ++WILIESLRRPR+GCF
Sbjct: 181  LANMNVARYDFACAEVNGMVYAVGGYGADGDSLSSAEMYDADADKWILIESLRRPRYGCF 240

Query: 630  ACGIEGKLYVMGGRSSFTIGNSRFVDIYNPECHSWCEMKNGCVMVTAHAVMGNKLFCMEW 451
            ACG EGKLYVMGGRSSFTIGNSRFVD+YNPE H+WCEMKNG VMVTAHAV+G KLFCMEW
Sbjct: 241  ACGFEGKLYVMGGRSSFTIGNSRFVDVYNPERHTWCEMKNGRVMVTAHAVLGKKLFCMEW 300

Query: 450  KNQRKLAIYNPDDNSWKMVPVPVAGSSRVGFCFGILDEKLLLFSLEEEPGYQTLLYDPDA 271
            KNQRKLAI+NP+DNSWKMVPVP+ GSS +GF FGIL+ KLLLFSLEE+PGY+TLLYDPDA
Sbjct: 301  KNQRKLAIFNPEDNSWKMVPVPLTGSSSIGFRFGILEGKLLLFSLEEDPGYRTLLYDPDA 360

Query: 270  APGSEWQTSAIKQSEQSGLCLCSVTIKA 187
            APGSEWQTS IK    SG CLCSVTIKA
Sbjct: 361  APGSEWQTSEIK---PSGSCLCSVTIKA 385


>ref|XP_003531188.1| PREDICTED: F-box/kelch-repeat protein At1g67480-like [Glycine max]
          Length = 388

 Score =  560 bits (1444), Expect = e-157
 Identities = 268/391 (68%), Positives = 309/391 (79%), Gaps = 3/391 (0%)
 Frame = -1

Query: 1350 MPGFVTGKNQLIESEMCFSTKVQKVLPTPPKTNRQLTPQV---SDEFYNPILPGLSDDVA 1180
            MP FV  K   +E  MCF+       PT  K N  +  +     D+  +PILPGL DDV+
Sbjct: 1    MPSFVAEKKIFVEPNMCFTNLANHDRPTLTKNNHYVRSEALDDDDDGTSPILPGLPDDVS 60

Query: 1179 KHCLALVPRSNLPAMGAVCKPWRSFIQSKEFVSVRKQIGKLEEWLYVLTADAQGKGRHWE 1000
            KHCLALVPRSN PAMG VCK WR FI+SKEF++VRK  G  EEWLY+LTA ++GKG HWE
Sbjct: 61   KHCLALVPRSNFPAMGGVCKRWRGFIRSKEFITVRKLAGMHEEWLYILTAGSEGKGSHWE 120

Query: 999  ILGCLGHDRQLLPTMPGPERAGFGXXXXXXXXXXXAGYFVDEGTACVSTDVYQYDSCLNS 820
            ++ CLGH+R+ LP MPGP +AGFG           AGY   +GTA VS +VYQYDSCLNS
Sbjct: 121  VMDCLGHNRRSLPPMPGPAKAGFGVVVLNGKLLVMAGYSSIDGTASVSAEVYQYDSCLNS 180

Query: 819  WSTLATMNVARYDFACAEVNGMVYAVGGHGSNGESLSSAEVYDPENNEWILIESLRRPRW 640
            WS L++MNVARYDFACAEV+G+VYAVGG+G+ G+SLSSAEVYD + ++W  IESLRRPRW
Sbjct: 181  WSRLSSMNVARYDFACAEVDGLVYAVGGYGATGDSLSSAEVYDLDTDKWTPIESLRRPRW 240

Query: 639  GCFACGIEGKLYVMGGRSSFTIGNSRFVDIYNPECHSWCEMKNGCVMVTAHAVMGNKLFC 460
            GCFACG EGKLYVMGGRSSFTIGNS+FVD+YNPE H WCEMKNGCVMVTA+AV+  KLFC
Sbjct: 241  GCFACGFEGKLYVMGGRSSFTIGNSKFVDVYNPEKHGWCEMKNGCVMVTAYAVLEKKLFC 300

Query: 459  MEWKNQRKLAIYNPDDNSWKMVPVPVAGSSRVGFCFGILDEKLLLFSLEEEPGYQTLLYD 280
            MEWKNQRKLAI+NP+DNSWKMVPVP+ GSS +GF FGILD KLLLFSLEEEP Y+TLLYD
Sbjct: 301  MEWKNQRKLAIFNPEDNSWKMVPVPLTGSSSIGFRFGILDGKLLLFSLEEEPSYKTLLYD 360

Query: 279  PDAAPGSEWQTSAIKQSEQSGLCLCSVTIKA 187
            P+AAPGSEW TS I+    SGLCLCSVTIKA
Sbjct: 361  PNAAPGSEWHTSDIR---PSGLCLCSVTIKA 388


>ref|XP_003538556.1| PREDICTED: F-box/kelch-repeat protein At1g67480-like [Glycine max]
          Length = 385

 Score =  556 bits (1434), Expect = e-156
 Identities = 266/388 (68%), Positives = 307/388 (79%)
 Frame = -1

Query: 1350 MPGFVTGKNQLIESEMCFSTKVQKVLPTPPKTNRQLTPQVSDEFYNPILPGLSDDVAKHC 1171
            MPGF  GK + I+  MCF+  + +   T  + N  L P+  ++ Y+PILPGL DDVA++C
Sbjct: 1    MPGFTVGKKRFIQPNMCFTNLINQDKSTLSQNNHCLFPEALNKDYSPILPGLPDDVAEYC 60

Query: 1170 LALVPRSNLPAMGAVCKPWRSFIQSKEFVSVRKQIGKLEEWLYVLTADAQGKGRHWEILG 991
            LALVPRSN PAMG VCK WRSFIQSKEF +VRK  G LEEWLY LT D +GK  +WE++ 
Sbjct: 61   LALVPRSNFPAMGGVCKIWRSFIQSKEFATVRKLAGMLEEWLYFLTTDCEGKESYWEVMD 120

Query: 990  CLGHDRQLLPTMPGPERAGFGXXXXXXXXXXXAGYFVDEGTACVSTDVYQYDSCLNSWST 811
            CLGH  + LP MPGP +AGF            AGY V EGTA  S +VYQYDSCLNSWS 
Sbjct: 121  CLGHKCRSLPPMPGPGKAGFQVVVLNGKLLVMAGYSVIEGTAFASAEVYQYDSCLNSWSR 180

Query: 810  LATMNVARYDFACAEVNGMVYAVGGHGSNGESLSSAEVYDPENNEWILIESLRRPRWGCF 631
            L+ MNV+RYDFACAEVNG+VYAVGG+G NG+SLSSAEVYDP+ ++W LIESLRRPRWGCF
Sbjct: 181  LSDMNVSRYDFACAEVNGLVYAVGGYGVNGDSLSSAEVYDPDTDKWALIESLRRPRWGCF 240

Query: 630  ACGIEGKLYVMGGRSSFTIGNSRFVDIYNPECHSWCEMKNGCVMVTAHAVMGNKLFCMEW 451
            ACG EGKLYVMGGRSSFTIGNS+FVDIYNPE HSWCE+KNGCVMVTAHAV+G KLFC+EW
Sbjct: 241  ACGFEGKLYVMGGRSSFTIGNSKFVDIYNPERHSWCEIKNGCVMVTAHAVLGKKLFCIEW 300

Query: 450  KNQRKLAIYNPDDNSWKMVPVPVAGSSRVGFCFGILDEKLLLFSLEEEPGYQTLLYDPDA 271
            KNQRKLAI++P+DNSWKMVPVP+ GSS +GF FGILD KLLLF LE E  +QTLLYDP+A
Sbjct: 301  KNQRKLAIFSPEDNSWKMVPVPLTGSSSIGFRFGILDGKLLLFPLEAETAFQTLLYDPNA 360

Query: 270  APGSEWQTSAIKQSEQSGLCLCSVTIKA 187
            + GSEWQT  I+    SGLCLC VTIKA
Sbjct: 361  SLGSEWQTCDIR---PSGLCLCCVTIKA 385


>ref|XP_002514931.1| Protein AFR, putative [Ricinus communis] gi|223545982|gb|EEF47485.1|
            Protein AFR, putative [Ricinus communis]
          Length = 391

 Score =  546 bits (1408), Expect = e-153
 Identities = 268/388 (69%), Positives = 304/388 (78%)
 Frame = -1

Query: 1350 MPGFVTGKNQLIESEMCFSTKVQKVLPTPPKTNRQLTPQVSDEFYNPILPGLSDDVAKHC 1171
            MPGFV GK +L   +M F T + +   T  K N QL  +V+D+  +PILPGL DDVAK+C
Sbjct: 8    MPGFVGGKKRLTNMDMSFLTSLTQAKLTYSKNNLQLPSRVADDIDSPILPGLPDDVAKYC 67

Query: 1170 LALVPRSNLPAMGAVCKPWRSFIQSKEFVSVRKQIGKLEEWLYVLTADAQGKGRHWEILG 991
            LALVPR   P+MGAVCK WRSF++SKEF+ VRK  G LEE LYVLT D++G    WE+L 
Sbjct: 68   LALVPRPYFPSMGAVCKKWRSFMKSKEFLVVRKLAGLLEELLYVLTVDSEGTQSQWEVLD 127

Query: 990  CLGHDRQLLPTMPGPERAGFGXXXXXXXXXXXAGYFVDEGTACVSTDVYQYDSCLNSWST 811
            CLG  RQL P MPG  +AGFG           AGY V +GT   S DVY+YDSCLNSWS 
Sbjct: 128  CLGQRRQL-PLMPGSVKAGFGVVALNGKLLVMAGYSVIDGTGSASADVYEYDSCLNSWSK 186

Query: 810  LATMNVARYDFACAEVNGMVYAVGGHGSNGESLSSAEVYDPENNEWILIESLRRPRWGCF 631
            L++MNVARYDFACAEVNG VYAVGG+G +G+SLSSAE YDP+  +W LIESLRRPRWGCF
Sbjct: 187  LSSMNVARYDFACAEVNGKVYAVGGYGVDGDSLSSAETYDPDTKKWTLIESLRRPRWGCF 246

Query: 630  ACGIEGKLYVMGGRSSFTIGNSRFVDIYNPECHSWCEMKNGCVMVTAHAVMGNKLFCMEW 451
            AC  EGKLYVMGGRSSFTIGNS+ VD+YNPE H+WCEMKNGCVMVTAHAV+G KLFCMEW
Sbjct: 247  ACSFEGKLYVMGGRSSFTIGNSKKVDVYNPERHTWCEMKNGCVMVTAHAVLGKKLFCMEW 306

Query: 450  KNQRKLAIYNPDDNSWKMVPVPVAGSSRVGFCFGILDEKLLLFSLEEEPGYQTLLYDPDA 271
            KNQRKLAI+NP+DNSWKMVPVPV GSS +GF FGILD KLLLFSLE+ P Y TLLYDP+A
Sbjct: 307  KNQRKLAIFNPEDNSWKMVPVPVTGSSSIGFQFGILDGKLLLFSLEKAPDYHTLLYDPNA 366

Query: 270  APGSEWQTSAIKQSEQSGLCLCSVTIKA 187
            +PGSEWQTS IK    SG CLCSVTIKA
Sbjct: 367  SPGSEWQTSEIK---PSGQCLCSVTIKA 391


>ref|XP_002327284.1| predicted protein [Populus trichocarpa] gi|222835654|gb|EEE74089.1|
            predicted protein [Populus trichocarpa]
          Length = 381

 Score =  538 bits (1386), Expect = e-150
 Identities = 258/388 (66%), Positives = 304/388 (78%)
 Frame = -1

Query: 1350 MPGFVTGKNQLIESEMCFSTKVQKVLPTPPKTNRQLTPQVSDEFYNPILPGLSDDVAKHC 1171
            M G V+GK +  E+ M FST + +   + P+    L  Q+ ++  +PILPGL DDVAK+C
Sbjct: 1    MLGIVSGKKRFTEANMTFSTLITQDFKSKPR----LASQIPNDIDSPILPGLPDDVAKYC 56

Query: 1170 LALVPRSNLPAMGAVCKPWRSFIQSKEFVSVRKQIGKLEEWLYVLTADAQGKGRHWEILG 991
            LALVPRS+ P MG+VCK WRSF++SKE +++RK  G LEEWLYVLT D++ K  HWE+  
Sbjct: 57   LALVPRSHFPTMGSVCKKWRSFLKSKELITIRKLAGLLEEWLYVLTMDSEAKESHWEVFD 116

Query: 990  CLGHDRQLLPTMPGPERAGFGXXXXXXXXXXXAGYFVDEGTACVSTDVYQYDSCLNSWST 811
            CLGH  QLLP MPGP +A FG           AGY V +GT   S DVY+YDSCLNSW  
Sbjct: 117  CLGHKHQLLPPMPGPVKAEFGVVVLNGKLLVMAGYSVIDGTGSASADVYEYDSCLNSWRK 176

Query: 810  LATMNVARYDFACAEVNGMVYAVGGHGSNGESLSSAEVYDPENNEWILIESLRRPRWGCF 631
            LA+MNVARY+FACAEVNG VY VGG+G +G+SLSS E+Y+P+ ++W LIESLRRPR GCF
Sbjct: 177  LASMNVARYEFACAEVNGKVYVVGGNGMDGDSLSSVEMYNPDTDKWTLIESLRRPRRGCF 236

Query: 630  ACGIEGKLYVMGGRSSFTIGNSRFVDIYNPECHSWCEMKNGCVMVTAHAVMGNKLFCMEW 451
            AC  EGKLYVMGGRSSFTIGNS+FVD+YNPE H+WCEMKNG VMVTAHAV+G KLFCMEW
Sbjct: 237  ACSFEGKLYVMGGRSSFTIGNSKFVDVYNPEGHTWCEMKNGRVMVTAHAVLGKKLFCMEW 296

Query: 450  KNQRKLAIYNPDDNSWKMVPVPVAGSSRVGFCFGILDEKLLLFSLEEEPGYQTLLYDPDA 271
            KNQRKLAI++P+DNSWKMVPVP+ GSS +GF FGILD KLLLFS E EPGY+TLLYDPDA
Sbjct: 297  KNQRKLAIFSPEDNSWKMVPVPLTGSSSIGFRFGILDGKLLLFSQEMEPGYRTLLYDPDA 356

Query: 270  APGSEWQTSAIKQSEQSGLCLCSVTIKA 187
            +PGSEWQTS IK    SG CLCSVTIKA
Sbjct: 357  SPGSEWQTSEIK---PSGWCLCSVTIKA 381


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