BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009495
         (1181 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632213.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   352   8e-95
ref|XP_002515876.1| Ubiquitin carboxyl-terminal hydrolase, putat...   336   6e-90
ref|XP_002299762.1| predicted protein [Populus trichocarpa] gi|2...   335   1e-89
ref|XP_004140175.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   331   2e-88
ref|XP_003596922.1| Ubiquitin carboxyl-terminal hydrolase [Medic...   331   2e-88

>ref|XP_003632213.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Vitis
            vinifera]
          Length = 882

 Score =  352 bits (904), Expect = 8e-95
 Identities = 175/253 (69%), Positives = 204/253 (80%), Gaps = 7/253 (2%)
 Frame = +2

Query: 5    EMEDVRDSSGDVA-------NKVEDNPDSDIEVEFYLTDDKGMKIKDSKMEMDEEISVTE 163
            E+++++D+   V        N++  +PDSD E++FYLTDDKG   + SK+ MDE   VT 
Sbjct: 632  EVKELKDAISPVLSAGVNGINEIWVDPDSDAELQFYLTDDKGAT-RASKLVMDEP--VTR 688

Query: 164  ITGRLNLHVNWSDKLIDHYDTQRLSSLPEIFKSGFFAKRPQESVSLYSCLEAFLKEEPLG 343
            +  RLNL V W +K I+ YDT  +SSLPEIFKSGF A+RPQESVSLY CLEAFLKEEPLG
Sbjct: 689  LPRRLNLLVFWPEKKIEQYDTHLISSLPEIFKSGFIARRPQESVSLYRCLEAFLKEEPLG 748

Query: 344  PEDMWYCPGCKEPRQASKKLDLWRLPEILIIHLKRFSYSRFMKNKLDSFVDFPIDDLDLS 523
            P+DMWYCPGCK  RQASKKLDLWRLPEIL+IHLKRFSYSRFMKNKL+++VDFP+D+LDLS
Sbjct: 749  PDDMWYCPGCKTHRQASKKLDLWRLPEILVIHLKRFSYSRFMKNKLETYVDFPVDNLDLS 808

Query: 524  TYIACINNQSSCRYRLFAVSNHYGSMGGGHYTAFVFHGGNQWFDFDDSRVSPINVDKIKT 703
            TYI   N   S RY L+AVSNHYGSMGGGHYTAFV HGG+QW+DFDDS VSPI  DKIKT
Sbjct: 809  TYITHKNGMVSNRYMLYAVSNHYGSMGGGHYTAFVHHGGDQWYDFDDSHVSPIPEDKIKT 868

Query: 704  SAAYVLFYRRIQD 742
            SAAYVLFYRR+ D
Sbjct: 869  SAAYVLFYRRVVD 881


>ref|XP_002515876.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
            gi|223545031|gb|EEF46545.1| Ubiquitin carboxyl-terminal
            hydrolase, putative [Ricinus communis]
          Length = 889

 Score =  336 bits (862), Expect = 6e-90
 Identities = 157/226 (69%), Positives = 191/226 (84%)
 Frame = +2

Query: 59   NPDSDIEVEFYLTDDKGMKIKDSKMEMDEEISVTEITGRLNLHVNWSDKLIDHYDTQRLS 238
            N  S  E++FY+TD+KG+ ++D K+ ++E + VT +  R N+ V W++K I+ YDT+ LS
Sbjct: 662  NSSSYSELQFYITDEKGI-VQDLKIGINEPVPVTGVPKRFNVLVCWTEKQIEQYDTRLLS 720

Query: 239  SLPEIFKSGFFAKRPQESVSLYSCLEAFLKEEPLGPEDMWYCPGCKEPRQASKKLDLWRL 418
            SLPE+FKSGF AKRPQESVSLY CLEAFLKEEPLGP+DMW+CP CK+ RQASKKLDLWRL
Sbjct: 721  SLPEVFKSGFLAKRPQESVSLYKCLEAFLKEEPLGPDDMWFCPSCKKHRQASKKLDLWRL 780

Query: 419  PEILIIHLKRFSYSRFMKNKLDSFVDFPIDDLDLSTYIACINNQSSCRYRLFAVSNHYGS 598
            PEIL+IHLKRFSY+RFMKNKL+++VDFP+DDLDLS YI+  N Q S RY L+A+SNHYGS
Sbjct: 781  PEILVIHLKRFSYTRFMKNKLEAYVDFPVDDLDLSAYISYKNGQLSHRYMLYAISNHYGS 840

Query: 599  MGGGHYTAFVFHGGNQWFDFDDSRVSPINVDKIKTSAAYVLFYRRI 736
            MGGGHYTAFV HG  +W+DFDDS V PI+ DKIKTSAAYVLFYRR+
Sbjct: 841  MGGGHYTAFVHHGAGRWYDFDDSLVHPISQDKIKTSAAYVLFYRRV 886


>ref|XP_002299762.1| predicted protein [Populus trichocarpa] gi|222847020|gb|EEE84567.1|
            predicted protein [Populus trichocarpa]
          Length = 624

 Score =  335 bits (860), Expect = 1e-89
 Identities = 158/223 (70%), Positives = 188/223 (84%)
 Frame = +2

Query: 68   SDIEVEFYLTDDKGMKIKDSKMEMDEEISVTEITGRLNLHVNWSDKLIDHYDTQRLSSLP 247
            SD E++FYLTD+KGM +KD  + M+E +    +  R N+ V W +KL   YDT  LSSLP
Sbjct: 402  SDSELQFYLTDEKGM-VKDENIVMNEPVPKIGLHRRFNVLVCWPEKLTKQYDTSLLSSLP 460

Query: 248  EIFKSGFFAKRPQESVSLYSCLEAFLKEEPLGPEDMWYCPGCKEPRQASKKLDLWRLPEI 427
            EIFKSGFFAKRPQESVSLY+CLEAFLKEEPLGPEDMWYCP CK+ RQASKKLDLWRLPEI
Sbjct: 461  EIFKSGFFAKRPQESVSLYNCLEAFLKEEPLGPEDMWYCPSCKQHRQASKKLDLWRLPEI 520

Query: 428  LIIHLKRFSYSRFMKNKLDSFVDFPIDDLDLSTYIACINNQSSCRYRLFAVSNHYGSMGG 607
            L+IHLKRFSY+   KNKL+++VDFP+DDLDLST+++  N Q S RY L+A+SNHYGSMGG
Sbjct: 521  LVIHLKRFSYTHSAKNKLETYVDFPVDDLDLSTHLSYKNGQLSHRYMLYAISNHYGSMGG 580

Query: 608  GHYTAFVFHGGNQWFDFDDSRVSPINVDKIKTSAAYVLFYRRI 736
            GHYTAF+ +GG+QW+DFDDS VSPI+ +KIKTSAAYVLFYRR+
Sbjct: 581  GHYTAFIHYGGDQWYDFDDSHVSPISQEKIKTSAAYVLFYRRV 623


>ref|XP_004140175.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Cucumis
            sativus]
          Length = 877

 Score =  331 bits (849), Expect = 2e-88
 Identities = 158/233 (67%), Positives = 192/233 (82%)
 Frame = +2

Query: 38   VANKVEDNPDSDIEVEFYLTDDKGMKIKDSKMEMDEEISVTEITGRLNLHVNWSDKLIDH 217
            + + V  N  SD +++FY TDDKG+ I+ S++E+ E +  +E + RL + V+W +K I+ 
Sbjct: 644  IEDGVNCNSPSDADLQFYTTDDKGI-IRGSEIEVGEFVVGSEKSKRLYVLVSWPEKQIER 702

Query: 218  YDTQRLSSLPEIFKSGFFAKRPQESVSLYSCLEAFLKEEPLGPEDMWYCPGCKEPRQASK 397
            YDT  L+SLPE+FKS FFAKRPQESVSLY CLEAFL+EEPLGPEDMWYCP CK+  QASK
Sbjct: 703  YDTHLLTSLPEVFKSSFFAKRPQESVSLYKCLEAFLQEEPLGPEDMWYCPSCKKHCQASK 762

Query: 398  KLDLWRLPEILIIHLKRFSYSRFMKNKLDSFVDFPIDDLDLSTYIACINNQSSCRYRLFA 577
            KLDLWRLPEIL+IHLKRFSYSRFMKNKL+++VDFP+DDLDLS Y+A  N QS  RY L+A
Sbjct: 763  KLDLWRLPEILVIHLKRFSYSRFMKNKLEAYVDFPVDDLDLSMYVAYKNGQSCTRYVLYA 822

Query: 578  VSNHYGSMGGGHYTAFVFHGGNQWFDFDDSRVSPINVDKIKTSAAYVLFYRRI 736
            VSNHYGSMGGGHYTAFV  GG+QW++FDDS V PI +DKIK+ AAYVLFYRR+
Sbjct: 823  VSNHYGSMGGGHYTAFVHQGGDQWYNFDDSNVYPIGLDKIKSCAAYVLFYRRV 875


>ref|XP_003596922.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
            gi|355485970|gb|AES67173.1| Ubiquitin carboxyl-terminal
            hydrolase [Medicago truncatula]
          Length = 871

 Score =  331 bits (848), Expect = 2e-88
 Identities = 164/246 (66%), Positives = 194/246 (78%)
 Frame = +2

Query: 5    EMEDVRDSSGDVANKVEDNPDSDIEVEFYLTDDKGMKIKDSKMEMDEEISVTEITGRLNL 184
            E+E V DS  D      D P SD E+EFY+TDDKG  +K+SK+ M+E ++V      L++
Sbjct: 622  EIEGVADSGSDTIVNGLDTP-SDGEMEFYITDDKGT-VKNSKILMNEPLTVNGGLNPLHV 679

Query: 185  HVNWSDKLIDHYDTQRLSSLPEIFKSGFFAKRPQESVSLYSCLEAFLKEEPLGPEDMWYC 364
             V WS+K I  YDTQ  SSLPE+ KS F AKRPQE VSLY CLE FL+EEPLGPEDMWYC
Sbjct: 680  LVCWSEKQIKKYDTQLSSSLPEVCKSSFLAKRPQEPVSLYKCLETFLQEEPLGPEDMWYC 739

Query: 365  PGCKEPRQASKKLDLWRLPEILIIHLKRFSYSRFMKNKLDSFVDFPIDDLDLSTYIACIN 544
            PGCK  RQASKKLDLWRLPEIL+IHLKRF YSRFMKNKL++ VDFP+D+LDLS+YI    
Sbjct: 740  PGCKNHRQASKKLDLWRLPEILVIHLKRFQYSRFMKNKLETLVDFPVDNLDLSSYIT-HG 798

Query: 545  NQSSCRYRLFAVSNHYGSMGGGHYTAFVFHGGNQWFDFDDSRVSPINVDKIKTSAAYVLF 724
            NQ S  Y L+A+SNH+GSMGGGHYTAFV HGG+QW+DFDDSRV PI+ +KIK+SAAYVLF
Sbjct: 799  NQKSYHYTLYAISNHFGSMGGGHYTAFVHHGGDQWYDFDDSRVYPISKEKIKSSAAYVLF 858

Query: 725  YRRIQD 742
            YRR+ +
Sbjct: 859  YRRVSE 864