BLASTX nr result

ID: Coptis23_contig00009494 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009494
         (1590 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281658.1| PREDICTED: probable galacturonosyltransferas...   523   e-146
ref|XP_002312381.1| glycosyltransferase, CAZy family GT8 [Populu...   494   e-137
ref|XP_002314884.1| glycosyltransferase, CAZy family GT8 [Populu...   487   e-135
gb|AAM61338.1| putative glycosyl transferase [Arabidopsis thaliana]   485   e-134
ref|NP_563925.1| putative galacturonosyltransferase-like 3 [Arab...   485   e-134

>ref|XP_002281658.1| PREDICTED: probable galacturonosyltransferase-like 3 [Vitis vinifera]
          Length = 345

 Score =  523 bits (1346), Expect = e-146
 Identities = 239/307 (77%), Positives = 273/307 (88%)
 Frame = +2

Query: 179  FREAPAFRNGPKCQKIPLPSFHKNSPHNPSLIHISMTLDTHYLRGSIAGILSILQHASCP 358
            F EAPAFRNG +C +    S  K S +NPS+IHI+MTLD  YLRGSIAG+LS+LQHASCP
Sbjct: 31   FSEAPAFRNGEECPRTTWSSLPKGS-YNPSIIHIAMTLDATYLRGSIAGVLSVLQHASCP 89

Query: 359  QNIVFHFLISQQRKQLYNTILTTFPYLNFHFYYFDTNLVRNIISSSIRRALDQPLNYARI 538
            +NIVFHFL S +R +L   I+TTFPYL+FH Y+FDTNLV+  ISSSIRRALDQPLNYARI
Sbjct: 90   ENIVFHFLASHRRAELRRIIVTTFPYLSFHLYHFDTNLVKGKISSSIRRALDQPLNYARI 149

Query: 539  YVPDLLSNGVRRIIYFDSDIIVVDDVEKLWSINLGPHVLGAPEYCHANFTHYFTEEFWSN 718
            Y+ DLL  GVRRIIYFDSD+IVVDDV KLW INLGPHVLGAPEYCHANFT+YFT +FWSN
Sbjct: 150  YLADLLPGGVRRIIYFDSDLIVVDDVAKLWEINLGPHVLGAPEYCHANFTNYFTAKFWSN 209

Query: 719  PIFSSAFKDRKPCYFNTGVMVIDVMKWRQGKYSGKLEMWMSLQKKYRIYELGSLPPFLLV 898
            P F+++F+ RKPCYFNTGVMVID+ +WR+GK++ +LE WM +QK+YRIY+LGSLPPFLLV
Sbjct: 210  PAFTTSFRGRKPCYFNTGVMVIDLWRWREGKFTERLETWMRIQKRYRIYQLGSLPPFLLV 269

Query: 899  FAGDVEGVEHRWNQHGLGGDNIQGLCRNLHPGPVSLLHWSGKGKPWLRLDSKQPCPLDSL 1078
            FAGDVEGVEHRWNQHGLGGDN++GLCRNLHPGPVSLLHWSGKGKPWLRLDSK+PCPLDSL
Sbjct: 270  FAGDVEGVEHRWNQHGLGGDNLEGLCRNLHPGPVSLLHWSGKGKPWLRLDSKRPCPLDSL 329

Query: 1079 WAPYDLF 1099
            WAPYDLF
Sbjct: 330  WAPYDLF 336


>ref|XP_002312381.1| glycosyltransferase, CAZy family GT8 [Populus trichocarpa]
            gi|222852201|gb|EEE89748.1| glycosyltransferase, CAZy
            family GT8 [Populus trichocarpa]
          Length = 346

 Score =  494 bits (1273), Expect = e-137
 Identities = 227/310 (73%), Positives = 266/310 (85%), Gaps = 3/310 (0%)
 Frame = +2

Query: 179  FREAPAFRNGPKCQKIPLPSFHKN---SPHNPSLIHISMTLDTHYLRGSIAGILSILQHA 349
            FREAPAFRNG +C K   PS   N     H+PS+IHI+MTLD  YLRGS+AG+LS+LQHA
Sbjct: 28   FREAPAFRNGRECPKKTWPSSFNNLNHHRHDPSIIHIAMTLDATYLRGSVAGVLSVLQHA 87

Query: 350  SCPQNIVFHFLISQQRKQLYNTILTTFPYLNFHFYYFDTNLVRNIISSSIRRALDQPLNY 529
            +CP++IVFHF+ + +R  L  TI +TFPYL FH Y+F+T+LVR  ISSSIRRALDQPLNY
Sbjct: 88   ACPEHIVFHFIATHRRADLRRTITSTFPYLTFHLYHFNTDLVRGKISSSIRRALDQPLNY 147

Query: 530  ARIYVPDLLSNGVRRIIYFDSDIIVVDDVEKLWSINLGPHVLGAPEYCHANFTHYFTEEF 709
            ARIY+ DLL   VRRIIYFDSD+IVVDDV KLW+INLG HVLGAPEYCH NF++YF   F
Sbjct: 148  ARIYLADLLPFTVRRIIYFDSDLIVVDDVAKLWNINLGAHVLGAPEYCHVNFSYYFNSRF 207

Query: 710  WSNPIFSSAFKDRKPCYFNTGVMVIDVMKWRQGKYSGKLEMWMSLQKKYRIYELGSLPPF 889
            WS+P+++++F  R+ CYFNTGVMVID+ KWR+GKY+ KLE WM +QKK RIYELGSLPPF
Sbjct: 208  WSSPVYATSFTGRRACYFNTGVMVIDLRKWREGKYTEKLEYWMRVQKKNRIYELGSLPPF 267

Query: 890  LLVFAGDVEGVEHRWNQHGLGGDNIQGLCRNLHPGPVSLLHWSGKGKPWLRLDSKQPCPL 1069
            LLVFAGDVEGVEHRWNQHGLGGDN++GLCR+LHPGPVSLLHWSGKGKPWLRL+SK+PCPL
Sbjct: 268  LLVFAGDVEGVEHRWNQHGLGGDNLEGLCRDLHPGPVSLLHWSGKGKPWLRLNSKRPCPL 327

Query: 1070 DSLWAPYDLF 1099
            DSLWAPYDL+
Sbjct: 328  DSLWAPYDLY 337


>ref|XP_002314884.1| glycosyltransferase, CAZy family GT8 [Populus trichocarpa]
            gi|222863924|gb|EEF01055.1| glycosyltransferase, CAZy
            family GT8 [Populus trichocarpa]
          Length = 342

 Score =  487 bits (1254), Expect = e-135
 Identities = 226/315 (71%), Positives = 266/315 (84%)
 Frame = +2

Query: 179  FREAPAFRNGPKCQKIPLPSFHKNSPHNPSLIHISMTLDTHYLRGSIAGILSILQHASCP 358
            FREAPAFRNG +C K    S   N+ H+PS+IHI+MTLD  YLRGS+AG+LS+LQHA+CP
Sbjct: 28   FREAPAFRNGRECPKTTWLS-SLNNYHDPSIIHIAMTLDATYLRGSVAGVLSVLQHAACP 86

Query: 359  QNIVFHFLISQQRKQLYNTILTTFPYLNFHFYYFDTNLVRNIISSSIRRALDQPLNYARI 538
            +N+VFHF+ + +R  L  TI +TFPY  FH Y+F+T+LV+  ISSSIRRALDQPLNYARI
Sbjct: 87   ENVVFHFIATHRRADLRRTITSTFPYQTFHLYHFNTDLVKGKISSSIRRALDQPLNYARI 146

Query: 539  YVPDLLSNGVRRIIYFDSDIIVVDDVEKLWSINLGPHVLGAPEYCHANFTHYFTEEFWSN 718
            Y+ DLL   VRRIIYFDSD+I+VDDV KLW+INLG HVLGAPEYCHANFT+YF   FWSN
Sbjct: 147  YLADLLPMSVRRIIYFDSDLILVDDVAKLWNINLGAHVLGAPEYCHANFTNYFNSRFWSN 206

Query: 719  PIFSSAFKDRKPCYFNTGVMVIDVMKWRQGKYSGKLEMWMSLQKKYRIYELGSLPPFLLV 898
               +++ + R+ CYFNTGVMVID+ KWR+GKY+ +LE WM +QKKYRIYELGSLPPFLLV
Sbjct: 207  SACAASLRGRRACYFNTGVMVIDLGKWREGKYTERLEYWMKVQKKYRIYELGSLPPFLLV 266

Query: 899  FAGDVEGVEHRWNQHGLGGDNIQGLCRNLHPGPVSLLHWSGKGKPWLRLDSKQPCPLDSL 1078
            FAGDVEGV HRWNQHGLGGDN++GLCR+LHPGPVSLLHWSGKGKPWLRLDSK+PCPLD L
Sbjct: 267  FAGDVEGVGHRWNQHGLGGDNLEGLCRDLHPGPVSLLHWSGKGKPWLRLDSKRPCPLDYL 326

Query: 1079 WAPYDLFHRNDESLF 1123
            WAPYDL+  +  SLF
Sbjct: 327  WAPYDLYRHS--SLF 339


>gb|AAM61338.1| putative glycosyl transferase [Arabidopsis thaliana]
          Length = 345

 Score =  485 bits (1249), Expect = e-134
 Identities = 227/309 (73%), Positives = 263/309 (85%), Gaps = 2/309 (0%)
 Frame = +2

Query: 179  FREAPAFRNGPKCQKIP-LPSFHKNSPHNPSLIHISMTLDTHYLRGSIAGILSILQHASC 355
            FREAPAFRNG +C K   +PS H+   HNPS+IHI+MTLD  YLRGS+AG+ S+LQHASC
Sbjct: 31   FREAPAFRNGRECSKTTWIPSDHE---HNPSIIHIAMTLDAIYLRGSVAGVFSVLQHASC 87

Query: 356  PQNIVFHFLISQQRK-QLYNTILTTFPYLNFHFYYFDTNLVRNIISSSIRRALDQPLNYA 532
            P+NIVFHF+ + +R   L   I +TFPYL +H Y+FD NLVR+ ISSSIRRALDQPLNYA
Sbjct: 88   PENIVFHFIATHRRSADLRRIISSTFPYLTYHIYHFDPNLVRSKISSSIRRALDQPLNYA 147

Query: 533  RIYVPDLLSNGVRRIIYFDSDIIVVDDVEKLWSINLGPHVLGAPEYCHANFTHYFTEEFW 712
            RIY+ DLL   VRR+IYFDSD++VVDDV KLW I+L  HV+GAPEYCHANFT+YFT  FW
Sbjct: 148  RIYLADLLPIAVRRVIYFDSDLVVVDDVAKLWRIDLRRHVVGAPEYCHANFTNYFTSRFW 207

Query: 713  SNPIFSSAFKDRKPCYFNTGVMVIDVMKWRQGKYSGKLEMWMSLQKKYRIYELGSLPPFL 892
            S+  + SA KDRKPCYFNTGVMVID+ KWR+ + + KLE WM +QK++RIYELGSLPPFL
Sbjct: 208  SSQGYKSALKDRKPCYFNTGVMVIDLGKWRERRVTVKLETWMRIQKRHRIYELGSLPPFL 267

Query: 893  LVFAGDVEGVEHRWNQHGLGGDNIQGLCRNLHPGPVSLLHWSGKGKPWLRLDSKQPCPLD 1072
            LVFAGDVE VEHRWNQHGLGGDN++GLCRNLHPGPVSLLHWSGKGKPWLRLDS++PCPLD
Sbjct: 268  LVFAGDVEPVEHRWNQHGLGGDNLEGLCRNLHPGPVSLLHWSGKGKPWLRLDSRRPCPLD 327

Query: 1073 SLWAPYDLF 1099
            SLWAPYDLF
Sbjct: 328  SLWAPYDLF 336


>ref|NP_563925.1| putative galacturonosyltransferase-like 3 [Arabidopsis thaliana]
            gi|122223578|sp|Q0V7R1.1|GATL3_ARATH RecName:
            Full=Probable galacturonosyltransferase-like 3
            gi|111074486|gb|ABH04616.1| At1g13250 [Arabidopsis
            thaliana] gi|332190869|gb|AEE28990.1| putative
            galacturonosyltransferase-like 3 [Arabidopsis thaliana]
          Length = 345

 Score =  485 bits (1249), Expect = e-134
 Identities = 227/309 (73%), Positives = 263/309 (85%), Gaps = 2/309 (0%)
 Frame = +2

Query: 179  FREAPAFRNGPKCQKIP-LPSFHKNSPHNPSLIHISMTLDTHYLRGSIAGILSILQHASC 355
            FREAPAFRNG +C K   +PS H+   HNPS+IHI+MTLD  YLRGS+AG+ S+LQHASC
Sbjct: 31   FREAPAFRNGRECSKTTWIPSDHE---HNPSIIHIAMTLDAIYLRGSVAGVFSVLQHASC 87

Query: 356  PQNIVFHFLISQQRK-QLYNTILTTFPYLNFHFYYFDTNLVRNIISSSIRRALDQPLNYA 532
            P+NIVFHF+ + +R   L   I +TFPYL +H Y+FD NLVR+ ISSSIRRALDQPLNYA
Sbjct: 88   PENIVFHFIATHRRSADLRRIISSTFPYLTYHIYHFDPNLVRSKISSSIRRALDQPLNYA 147

Query: 533  RIYVPDLLSNGVRRIIYFDSDIIVVDDVEKLWSINLGPHVLGAPEYCHANFTHYFTEEFW 712
            RIY+ DLL   VRR+IYFDSD++VVDDV KLW I+L  HV+GAPEYCHANFT+YFT  FW
Sbjct: 148  RIYLADLLPIAVRRVIYFDSDLVVVDDVAKLWRIDLRRHVVGAPEYCHANFTNYFTSRFW 207

Query: 713  SNPIFSSAFKDRKPCYFNTGVMVIDVMKWRQGKYSGKLEMWMSLQKKYRIYELGSLPPFL 892
            S+  + SA KDRKPCYFNTGVMVID+ KWR+ + + KLE WM +QK++RIYELGSLPPFL
Sbjct: 208  SSQGYKSALKDRKPCYFNTGVMVIDLGKWRERRVTVKLETWMRIQKRHRIYELGSLPPFL 267

Query: 893  LVFAGDVEGVEHRWNQHGLGGDNIQGLCRNLHPGPVSLLHWSGKGKPWLRLDSKQPCPLD 1072
            LVFAGDVE VEHRWNQHGLGGDN++GLCRNLHPGPVSLLHWSGKGKPWLRLDS++PCPLD
Sbjct: 268  LVFAGDVEPVEHRWNQHGLGGDNLEGLCRNLHPGPVSLLHWSGKGKPWLRLDSRRPCPLD 327

Query: 1073 SLWAPYDLF 1099
            SLWAPYDLF
Sbjct: 328  SLWAPYDLF 336


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