BLASTX nr result

ID: Coptis23_contig00009488 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009488
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P35100.1|CLPC_PEA RecName: Full=Chaperone protein ClpC, chlor...   255   3e-66
ref|XP_003630582.1| ATP-dependent Clp protease ATP-binding subun...   255   3e-66
gb|ADN33858.1| ATP-dependent clp protease [Cucumis melo subsp. m...   255   3e-66
ref|XP_002865831.1| heat shock protein 93-V [Arabidopsis lyrata ...   255   3e-66
ref|XP_002284518.1| PREDICTED: ATP-dependent Clp protease ATP-bi...   255   3e-66

>sp|P35100.1|CLPC_PEA RecName: Full=Chaperone protein ClpC, chloroplastic; AltName:
            Full=ATP-dependent Clp protease ATP-binding subunit ClpC
            homolog; AltName: Full=Casein lytic proteinase C; Flags:
            Precursor gi|169128|gb|AAA33680.1| nuclear encoded
            precursor to chloroplast protein [Pisum sativum]
          Length = 922

 Score =  255 bits (651), Expect = 3e-66
 Identities = 126/126 (100%), Positives = 126/126 (100%)
 Frame = +3

Query: 3    YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIE 182
            YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIE
Sbjct: 659  YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIE 718

Query: 183  KAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE 362
            KAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE
Sbjct: 719  KAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE 778

Query: 363  KDSSYN 380
            KDSSYN
Sbjct: 779  KDSSYN 784


>ref|XP_003630582.1| ATP-dependent Clp protease ATP-binding subunit clpA-like protein
            [Medicago truncatula] gi|355524604|gb|AET05058.1|
            ATP-dependent Clp protease ATP-binding subunit clpA-like
            protein [Medicago truncatula]
          Length = 926

 Score =  255 bits (651), Expect = 3e-66
 Identities = 126/126 (100%), Positives = 126/126 (100%)
 Frame = +3

Query: 3    YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIE 182
            YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIE
Sbjct: 663  YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIE 722

Query: 183  KAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE 362
            KAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE
Sbjct: 723  KAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE 782

Query: 363  KDSSYN 380
            KDSSYN
Sbjct: 783  KDSSYN 788


>gb|ADN33858.1| ATP-dependent clp protease [Cucumis melo subsp. melo]
          Length = 929

 Score =  255 bits (651), Expect = 3e-66
 Identities = 126/126 (100%), Positives = 126/126 (100%)
 Frame = +3

Query: 3    YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIE 182
            YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIE
Sbjct: 666  YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIE 725

Query: 183  KAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE 362
            KAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE
Sbjct: 726  KAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE 785

Query: 363  KDSSYN 380
            KDSSYN
Sbjct: 786  KDSSYN 791


>ref|XP_002865831.1| heat shock protein 93-V [Arabidopsis lyrata subsp. lyrata]
            gi|297311666|gb|EFH42090.1| heat shock protein 93-V
            [Arabidopsis lyrata subsp. lyrata]
          Length = 929

 Score =  255 bits (651), Expect = 3e-66
 Identities = 126/126 (100%), Positives = 126/126 (100%)
 Frame = +3

Query: 3    YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIE 182
            YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIE
Sbjct: 661  YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIE 720

Query: 183  KAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE 362
            KAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE
Sbjct: 721  KAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE 780

Query: 363  KDSSYN 380
            KDSSYN
Sbjct: 781  KDSSYN 786


>ref|XP_002284518.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpA
            homolog CD4A, chloroplastic-like [Vitis vinifera]
          Length = 923

 Score =  255 bits (651), Expect = 3e-66
 Identities = 126/126 (100%), Positives = 126/126 (100%)
 Frame = +3

Query: 3    YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIE 182
            YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIE
Sbjct: 659  YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIE 718

Query: 183  KAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE 362
            KAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE
Sbjct: 719  KAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE 778

Query: 363  KDSSYN 380
            KDSSYN
Sbjct: 779  KDSSYN 784


Top