BLASTX nr result

ID: Coptis23_contig00009477 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009477
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140715.1| PREDICTED: PRKR-interacting protein 1-like [...    88   8e-16
ref|XP_003536611.1| PREDICTED: PRKR-interacting protein 1-like [...    86   2e-15
ref|XP_002285382.1| PREDICTED: uncharacterized protein LOC100250...    86   2e-15
ref|NP_001240079.1| uncharacterized protein LOC100805970 [Glycin...    86   3e-15
gb|AFK35970.1| unknown [Medicago truncatula]                           85   5e-15

>ref|XP_004140715.1| PREDICTED: PRKR-interacting protein 1-like [Cucumis sativus]
           gi|449486605|ref|XP_004157345.1| PREDICTED:
           PRKR-interacting protein 1-like [Cucumis sativus]
          Length = 172

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 43/59 (72%), Positives = 46/59 (77%)
 Frame = +2

Query: 257 EDLEIKLRRIIDNVPVRVNNTXXXXXXXXXXDFHQYRQMRRKEQDRLARMDAHYEKVKE 433
           EDLE+KLRRIIDNVPVRV+NT          DFHQYRQMRRKEQDRLARMD  Y+K KE
Sbjct: 47  EDLEVKLRRIIDNVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKE 105


>ref|XP_003536611.1| PREDICTED: PRKR-interacting protein 1-like [Glycine max]
          Length = 170

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 43/59 (72%), Positives = 46/59 (77%)
 Frame = +2

Query: 257 EDLEIKLRRIIDNVPVRVNNTXXXXXXXXXXDFHQYRQMRRKEQDRLARMDAHYEKVKE 433
           EDLEIKLRRIIDNVPVRV+NT          DFHQYRQMRRKEQDRLARM+  Y+K KE
Sbjct: 46  EDLEIKLRRIIDNVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMEVDYQKRKE 104


>ref|XP_002285382.1| PREDICTED: uncharacterized protein LOC100250399 [Vitis vinifera]
          Length = 178

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 56/141 (39%), Positives = 70/141 (49%)
 Frame = +2

Query: 11  MSSTNSKTVIIEGDSQLVPVPKRTQSFSSSLPPLPIAKNXXXXXXXXXXXXXXXXXXXXX 190
           MSS  SK+ + +GD Q++P P++ +    +LPPLP                         
Sbjct: 1   MSSGRSKS-LTDGDLQVIPAPEKPKP---ALPPLP------------------------- 31

Query: 191 XXXXXXXXXXXXXXXXXXXXXXEDLEIKLRRIIDNVPVRVNNTXXXXXXXXXXDFHQYRQ 370
                                 EDLE+KLRRIID+VPVRV+NT          DFHQYRQ
Sbjct: 32  --PVVGSMALVEYAPPAPLEDEEDLEVKLRRIIDHVPVRVSNTSGSSAGSGSGDFHQYRQ 89

Query: 371 MRRKEQDRLARMDAHYEKVKE 433
           MRRKEQDRLARMD  Y++ KE
Sbjct: 90  MRRKEQDRLARMDVDYQRRKE 110


>ref|NP_001240079.1| uncharacterized protein LOC100805970 [Glycine max]
           gi|255646408|gb|ACU23683.1| unknown [Glycine max]
          Length = 170

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 42/59 (71%), Positives = 46/59 (77%)
 Frame = +2

Query: 257 EDLEIKLRRIIDNVPVRVNNTXXXXXXXXXXDFHQYRQMRRKEQDRLARMDAHYEKVKE 433
           EDLE+KLRRIIDNVPVRV+NT          DFHQYRQMRRKEQDRLARM+  Y+K KE
Sbjct: 46  EDLEVKLRRIIDNVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMEVDYQKRKE 104


>gb|AFK35970.1| unknown [Medicago truncatula]
          Length = 168

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 42/59 (71%), Positives = 46/59 (77%)
 Frame = +2

Query: 257 EDLEIKLRRIIDNVPVRVNNTXXXXXXXXXXDFHQYRQMRRKEQDRLARMDAHYEKVKE 433
           EDLEIKLRRIIDNVPVRV+NT          DFHQYRQMRRKEQDRLARM+  Y++ KE
Sbjct: 44  EDLEIKLRRIIDNVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMEVDYQRRKE 102


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