BLASTX nr result

ID: Coptis23_contig00009464 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009464
         (630 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541776.1| PREDICTED: protein spinster homolog 1-like [...    77   5e-24
ref|XP_002264030.2| PREDICTED: protein spinster homolog 1-like [...    80   2e-22
emb|CBI38036.3| unnamed protein product [Vitis vinifera]               80   2e-22
ref|XP_002518297.1| transporter, putative [Ricinus communis] gi|...    77   6e-22
ref|XP_003547108.1| PREDICTED: LOW QUALITY PROTEIN: protein spin...    71   2e-21

>ref|XP_003541776.1| PREDICTED: protein spinster homolog 1-like [Glycine max]
          Length = 532

 Score = 76.6 bits (187), Expect(2) = 5e-24
 Identities = 36/44 (81%), Positives = 40/44 (90%)
 Frame = -1

Query: 630 NMRPLSMAMSTVSIHIFGDVPSSPLVGTLQDYVNNWRESALILT 499
           ++RPLSMAMSTV IHIFGDVPSSPLVG LQD +NNWR +ALILT
Sbjct: 432 SLRPLSMAMSTVVIHIFGDVPSSPLVGVLQDNINNWRTTALILT 475



 Score = 60.1 bits (144), Expect(2) = 5e-24
 Identities = 27/47 (57%), Positives = 34/47 (72%)
 Frame = -3

Query: 400 AGIWFIGVFLHSVDKFDEDSRHQLATTESEDLRLLLEEKLMETPDEP 260
           AGIWFIG+FLH+VD+FDEDS HQ++  E  +   LL+EK  ET   P
Sbjct: 482 AGIWFIGIFLHTVDRFDEDSEHQVSNVERSNTMPLLQEKTGETSAFP 528


>ref|XP_002264030.2| PREDICTED: protein spinster homolog 1-like [Vitis vinifera]
          Length = 466

 Score = 80.5 bits (197), Expect(2) = 2e-22
 Identities = 38/44 (86%), Positives = 42/44 (95%)
 Frame = -1

Query: 630 NMRPLSMAMSTVSIHIFGDVPSSPLVGTLQDYVNNWRESALILT 499
           ++RPLSMAMSTV+IHIFGDVPSSPLVG LQD VNNWRE+ALILT
Sbjct: 369 SLRPLSMAMSTVAIHIFGDVPSSPLVGVLQDSVNNWRETALILT 412



 Score = 51.2 bits (121), Expect(2) = 2e-22
 Identities = 21/45 (46%), Positives = 30/45 (66%)
 Frame = -3

Query: 400 AGIWFIGVFLHSVDKFDEDSRHQLATTESEDLRLLLEEKLMETPD 266
           AGIWFIG+FLH VD+F+E+S H     +  +   LLE+K  +T +
Sbjct: 419 AGIWFIGIFLHGVDRFNEESEHHATRIDKSNTTPLLEDKTADTAE 463


>emb|CBI38036.3| unnamed protein product [Vitis vinifera]
          Length = 427

 Score = 80.5 bits (197), Expect(2) = 2e-22
 Identities = 38/44 (86%), Positives = 42/44 (95%)
 Frame = -1

Query: 630 NMRPLSMAMSTVSIHIFGDVPSSPLVGTLQDYVNNWRESALILT 499
           ++RPLSMAMSTV+IHIFGDVPSSPLVG LQD VNNWRE+ALILT
Sbjct: 330 SLRPLSMAMSTVAIHIFGDVPSSPLVGVLQDSVNNWRETALILT 373



 Score = 51.2 bits (121), Expect(2) = 2e-22
 Identities = 21/45 (46%), Positives = 30/45 (66%)
 Frame = -3

Query: 400 AGIWFIGVFLHSVDKFDEDSRHQLATTESEDLRLLLEEKLMETPD 266
           AGIWFIG+FLH VD+F+E+S H     +  +   LLE+K  +T +
Sbjct: 380 AGIWFIGIFLHGVDRFNEESEHHATRIDKSNTTPLLEDKTADTAE 424


>ref|XP_002518297.1| transporter, putative [Ricinus communis]
           gi|223542517|gb|EEF44057.1| transporter, putative
           [Ricinus communis]
          Length = 541

 Score = 77.0 bits (188), Expect(2) = 6e-22
 Identities = 37/44 (84%), Positives = 40/44 (90%)
 Frame = -1

Query: 630 NMRPLSMAMSTVSIHIFGDVPSSPLVGTLQDYVNNWRESALILT 499
           +MRPLSMAMS VSIHIFGDVPSSPLVG LQD +NNWR +ALILT
Sbjct: 442 SMRPLSMAMSIVSIHIFGDVPSSPLVGVLQDKINNWRLTALILT 485



 Score = 52.8 bits (125), Expect(2) = 6e-22
 Identities = 25/43 (58%), Positives = 31/43 (72%)
 Frame = -3

Query: 400 AGIWFIGVFLHSVDKFDEDSRHQLATTESEDLRLLLEEKLMET 272
           A IWFIG+FL SVDKF+E+S HQ+A T+  +   LLE K  ET
Sbjct: 492 AFIWFIGIFLKSVDKFNEESEHQVAVTDRSNTTPLLEGKTAET 534


>ref|XP_003547108.1| PREDICTED: LOW QUALITY PROTEIN: protein spinster homolog 1-like
           [Glycine max]
          Length = 496

 Score = 70.9 bits (172), Expect(2) = 2e-21
 Identities = 33/44 (75%), Positives = 38/44 (86%)
 Frame = -1

Query: 630 NMRPLSMAMSTVSIHIFGDVPSSPLVGTLQDYVNNWRESALILT 499
           ++RPLSMAMS V+IHIF DVPSSPLVG LQD +NNWR +A ILT
Sbjct: 396 SLRPLSMAMSAVAIHIFVDVPSSPLVGVLQDNINNWRTTAFILT 439



 Score = 57.4 bits (137), Expect(2) = 2e-21
 Identities = 27/47 (57%), Positives = 33/47 (70%)
 Frame = -3

Query: 400 AGIWFIGVFLHSVDKFDEDSRHQLATTESEDLRLLLEEKLMETPDEP 260
           AGI FIG+FLHSVD+FDEDS HQ++  E  +   LL+EK  ET   P
Sbjct: 446 AGICFIGIFLHSVDRFDEDSEHQVSNVERSNTMPLLQEKTGETSASP 492


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