BLASTX nr result

ID: Coptis23_contig00009462 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009462
         (221 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271699.2| PREDICTED: LOW QUALITY PROTEIN: protein argo...   102   3e-20
emb|CBI17106.3| unnamed protein product [Vitis vinifera]              102   3e-20
ref|XP_004167325.1| PREDICTED: LOW QUALITY PROTEIN: protein argo...    94   1e-17
ref|XP_004139565.1| PREDICTED: protein argonaute 5-like [Cucumis...    94   1e-17
ref|XP_002314317.1| argonaute protein group [Populus trichocarpa...    94   2e-17

>ref|XP_002271699.2| PREDICTED: LOW QUALITY PROTEIN: protein argonaute 5-like [Vitis
           vinifera]
          Length = 1038

 Score =  102 bits (255), Expect = 3e-20
 Identities = 53/73 (72%), Positives = 56/73 (76%), Gaps = 1/73 (1%)
 Frame = -3

Query: 216 HTQSVVKIASSCQQG-HLQXXXXXLPDCTGSYGKIKRICETELGIISQCCQPKQAMKCNK 40
           H QS+ K+AS  Q G  LQ     LPD TGSYGKIKRICETELGI+SQCCQP QA K NK
Sbjct: 660 HKQSMAKLASMGQNGKQLQLLIIILPDVTGSYGKIKRICETELGIVSQCCQPSQASKLNK 719

Query: 39  QYLENVALKINVK 1
           QY ENVALKINVK
Sbjct: 720 QYFENVALKINVK 732


>emb|CBI17106.3| unnamed protein product [Vitis vinifera]
          Length = 1032

 Score =  102 bits (255), Expect = 3e-20
 Identities = 53/73 (72%), Positives = 56/73 (76%), Gaps = 1/73 (1%)
 Frame = -3

Query: 216 HTQSVVKIASSCQQG-HLQXXXXXLPDCTGSYGKIKRICETELGIISQCCQPKQAMKCNK 40
           H QS+ K+AS  Q G  LQ     LPD TGSYGKIKRICETELGI+SQCCQP QA K NK
Sbjct: 654 HKQSMAKLASMGQNGKQLQLLIIILPDVTGSYGKIKRICETELGIVSQCCQPSQASKLNK 713

Query: 39  QYLENVALKINVK 1
           QY ENVALKINVK
Sbjct: 714 QYFENVALKINVK 726


>ref|XP_004167325.1| PREDICTED: LOW QUALITY PROTEIN: protein argonaute 5-like [Cucumis
           sativus]
          Length = 984

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 48/72 (66%), Positives = 54/72 (75%)
 Frame = -3

Query: 216 HTQSVVKIASSCQQGHLQXXXXXLPDCTGSYGKIKRICETELGIISQCCQPKQAMKCNKQ 37
           H+QS+  +    Q   LQ     LPD +GSYGKIKRICETELGI+SQCCQP+QA K NKQ
Sbjct: 616 HSQSLKSLGP--QGKSLQLLIIILPDISGSYGKIKRICETELGIVSQCCQPRQAQKLNKQ 673

Query: 36  YLENVALKINVK 1
           Y ENVALKINVK
Sbjct: 674 YFENVALKINVK 685


>ref|XP_004139565.1| PREDICTED: protein argonaute 5-like [Cucumis sativus]
          Length = 987

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 48/72 (66%), Positives = 54/72 (75%)
 Frame = -3

Query: 216 HTQSVVKIASSCQQGHLQXXXXXLPDCTGSYGKIKRICETELGIISQCCQPKQAMKCNKQ 37
           H+QS+  +    Q   LQ     LPD +GSYGKIKRICETELGI+SQCCQP+QA K NKQ
Sbjct: 611 HSQSLKSLGP--QGKSLQLLIIILPDISGSYGKIKRICETELGIVSQCCQPRQAQKLNKQ 668

Query: 36  YLENVALKINVK 1
           Y ENVALKINVK
Sbjct: 669 YFENVALKINVK 680


>ref|XP_002314317.1| argonaute protein group [Populus trichocarpa]
           gi|222850725|gb|EEE88272.1| argonaute protein group
           [Populus trichocarpa]
          Length = 987

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 48/73 (65%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
 Frame = -3

Query: 216 HTQSVVKIASSCQQG-HLQXXXXXLPDCTGSYGKIKRICETELGIISQCCQPKQAMKCNK 40
           H Q   ++A+  Q+G  LQ     LPD TGSYGKIKR+CETELGI+SQCCQP+QA K +K
Sbjct: 618 HKQCTAELAN--QKGKQLQLLIIILPDVTGSYGKIKRVCETELGIVSQCCQPQQAKKLSK 675

Query: 39  QYLENVALKINVK 1
           QY+ENVALKINVK
Sbjct: 676 QYMENVALKINVK 688


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