BLASTX nr result

ID: Coptis23_contig00009448 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009448
         (765 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285773.2| PREDICTED: uncharacterized protein LOC100267...   213   5e-53
ref|XP_002297610.1| predicted protein [Populus trichocarpa] gi|2...   201   1e-49
ref|XP_002523387.1| conserved hypothetical protein [Ricinus comm...   201   2e-49
emb|CAA18228.1| putative protein [Arabidopsis thaliana] gi|72694...   149   8e-34
ref|XP_002867565.1| predicted protein [Arabidopsis lyrata subsp....   147   2e-33

>ref|XP_002285773.2| PREDICTED: uncharacterized protein LOC100267326 [Vitis vinifera]
          Length = 557

 Score =  213 bits (541), Expect = 5e-53
 Identities = 121/233 (51%), Positives = 144/233 (61%), Gaps = 3/233 (1%)
 Frame = +3

Query: 51  MRKGFKNFCNGDGSTSTLNQRRKDQDMSCMVTPSSLDSSSYLGDNNVASRTPTXXXXXXX 230
           MR+G ++FCNGD STSTLNQ +         TP   DSS  +    +    PT       
Sbjct: 61  MRRGIRSFCNGDASTSTLNQHK--------TTPDHGDSS-LISSTTLVEIPPTLEEMILQ 111

Query: 231 XXXXXXAARKAKLNEYEEIRRRMSCVSNSDVLRSARNALNQYPRFSLDGKDAMYRSSFRN 410
                  ARKAKL EY E++RRMSCV+NSD+LRSARNALNQYPRFSLDGKDAMYRSSFRN
Sbjct: 112 LELEEEIARKAKLQEYGEMQRRMSCVNNSDILRSARNALNQYPRFSLDGKDAMYRSSFRN 171

Query: 411 ITPVMGGGYKDGRKSVCCGSGLTERIXXXXXXXXXIEKNLN--LPHTIGGKSVIWCKPSV 584
           + P        GRKS+CC  GL             +EK  +  LP T+ G+SVIWCKP V
Sbjct: 172 LAP--------GRKSICCNRGLVRGRCYTDEFDSKLEKKTSSCLPSTLAGESVIWCKPGV 223

Query: 585 VAKLMGLEAMPIPITRKLGKGRLGCKVKSQNL-RRAERHEMEKQRGFTRGMNG 740
           VAKLMGLE MP+P++      +L   V  QNL RRA+RHEME++R F   MNG
Sbjct: 224 VAKLMGLEVMPVPVSCNRSTEKLNSIVNRQNLRRRAQRHEMERRR-FVMDMNG 275


>ref|XP_002297610.1| predicted protein [Populus trichocarpa] gi|222844868|gb|EEE82415.1|
           predicted protein [Populus trichocarpa]
          Length = 272

 Score =  201 bits (511), Expect = 1e-49
 Identities = 119/232 (51%), Positives = 144/232 (62%), Gaps = 11/232 (4%)
 Frame = +3

Query: 51  MRKGFKNFCNGDGSTSTLNQRRKDQ----DMSCMVTPSSLDSSSYLGDNNVASR---TPT 209
           M++G +NFCNGD STSTL+Q  K      D  C VT      S Y   N+  +    +PT
Sbjct: 1   MKRGIRNFCNGDASTSTLDQHNKANYTADDHHCFVT------SPYTHMNHADTAQQGSPT 54

Query: 210 XXXXXXXXXXXXXAARKAKLNEYEEI---RRRMSCVSNSDVLRSARNALNQYPRFSLDGK 380
                         ARKAKLN Y ++     RMSCV+NSD+LRSARNAL+QYPRFSLDGK
Sbjct: 55  LEQMILQLELEEEFARKAKLNNYVDVGLRAGRMSCVNNSDILRSARNALSQYPRFSLDGK 114

Query: 381 DAMYRSSFRNITPVMGGGYKDGRKSVCCGSGLTERIXXXXXXXXXIEKNLNLPHTIGGKS 560
           DAMYRSSFRN+  V       GRKSVCC  GL ER+          E+ L+LP T+ G+ 
Sbjct: 115 DAMYRSSFRNLDSVSKAA--AGRKSVCCDHGLRERM-NRNNLGAKFERKLSLPPTLAGER 171

Query: 561 VIWCKPSVVAKLMGLEAMPIPITRKLGKGRLGCKVKSQNL-RRAERHEMEKQ 713
           V+WCKP VVAKLMGLEAMP+PI  +  K  L   +K QNL RRAERHE+E++
Sbjct: 172 VVWCKPGVVAKLMGLEAMPVPINSREDKETLASIIKRQNLRRRAERHEIERR 223


>ref|XP_002523387.1| conserved hypothetical protein [Ricinus communis]
           gi|223537337|gb|EEF38966.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 241

 Score =  201 bits (510), Expect = 2e-49
 Identities = 119/246 (48%), Positives = 152/246 (61%), Gaps = 9/246 (3%)
 Frame = +3

Query: 3   MKDLSFLLLKNNLGAKMRKGFKNFCNGDGSTSTLNQRRKDQDMSCMVTPSSLDSSSYLGD 182
           MKDLSF  LKN+ G KM+KG +NFCNGDGSTSTLNQ                +   ++ D
Sbjct: 1   MKDLSFFFLKNSFGGKMKKGIRNFCNGDGSTSTLNQHHL----------KPCNDPIHVDD 50

Query: 183 NNVAS-----RTPTXXXXXXXXXXXXXAARKAKLNEYEEIR-RRMSCVSNSDVLRSARNA 344
           +++AS     + PT              +RK+KLNE   +R RRMSCV+NSD+LRSARNA
Sbjct: 51  DDIASVDSQRKQPTLEEMILQLELEEEISRKSKLNELVAMRGRRMSCVNNSDILRSARNA 110

Query: 345 LNQYPRFSLDGKDAMYRSSFRNITPVMGGGYKDGRKSVCC--GSGLTERIXXXXXXXXXI 518
           LNQYPRFSLDGKDAMYRSSFRN+          GRKSVCC  G G+  R           
Sbjct: 111 LNQYPRFSLDGKDAMYRSSFRNLDHHQVA----GRKSVCCCDGRGVLMR---ERNDGFLD 163

Query: 519 EKNLNLPHTIGGKSVIWCKPSVVAKLMGLEAMPIPITRKLGKGRLGCKVKSQNL-RRAER 695
            +N  LP ++ G++V+WCKP V+ KLMGL+AMP+P+  +  K  +   +K Q+L RR ER
Sbjct: 164 RRNSCLPTSLRGENVVWCKPGVIGKLMGLDAMPVPVHNR--KETISPIIKRQSLRRRVER 221

Query: 696 HEMEKQ 713
           HEME++
Sbjct: 222 HEMERR 227


>emb|CAA18228.1| putative protein [Arabidopsis thaliana] gi|7269494|emb|CAB79497.1|
            putative protein [Arabidopsis thaliana]
          Length = 619

 Score =  149 bits (375), Expect = 8e-34
 Identities = 101/249 (40%), Positives = 132/249 (53%), Gaps = 20/249 (8%)
 Frame = +3

Query: 9    DLSFLLLKNNLGAKMRKGFKNFCNGDGSTSTLNQRRKDQDMSCMVTPSSLDSSSYLGDNN 188
            DL+  L K   G   R GF + C GDGST TLNQ +K+ D+   VTP   +++ + G + 
Sbjct: 341  DLTHKLFKRMRGRGPRSGFASSCGGDGSTLTLNQHQKN-DVGPSVTP---ENTPFGGGS- 395

Query: 189  VASRTPTXXXXXXXXXXXXXAARKAKLNE-----YEEIR--------------RRMSCVS 311
                  T               R+A+L E     Y+                  RMSCV+
Sbjct: 396  ----PRTLEEMILQLEVEEDIVRRARLRESYYGTYDNCDDHNDVDDDKLYHQPARMSCVN 451

Query: 312  NSDVLRSARNALNQYPRFSLDGKDAMYRSSF-RNITPVMGGGYKDGRKSVCCGSGLTERI 488
            +SD+LRSARNALNQYPRFSLDGKDAMYRSSF R++        + GR+S C     ++R 
Sbjct: 452  SSDILRSARNALNQYPRFSLDGKDAMYRSSFRRHLGTSADMTIQGGRRSHCGDQRTSKRS 511

Query: 489  XXXXXXXXXIEKNLNLPHTIGGKSVIWCKPSVVAKLMGLEAMPIPITRKLGKGRLGCKVK 668
                       +   LP T+ G+SV+WCK  VVAKLMGLE +P+P   K GK +LG  +K
Sbjct: 512  SQMSL------ETKRLPRTVAGESVVWCKTGVVAKLMGLEMIPVPDKGKSGKDKLGTLLK 565

Query: 669  SQNLRRAER 695
             + LRR ER
Sbjct: 566  RERLRRRER 574


>ref|XP_002867565.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297313401|gb|EFH43824.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 647

 Score =  147 bits (371), Expect = 2e-33
 Identities = 95/237 (40%), Positives = 125/237 (52%), Gaps = 19/237 (8%)
 Frame = +3

Query: 42   GAKMRKGFKNFCNGDGSTSTLNQRRKDQDMSCMVTPSSLDSSSYLGDNNVASRTPTXXXX 221
            G   R GF + C GDGST TLNQ +K+ D+   VTP   +++ + G +       T    
Sbjct: 380  GRGPRSGFASSCGGDGSTLTLNQHQKN-DVGPSVTP---ENTPFGGGS-----PRTLEEM 430

Query: 222  XXXXXXXXXAARKAKLNE-----------YEEIRR--------RMSCVSNSDVLRSARNA 344
                       R+A+L E           ++++          RMSCV++SD+LRSARNA
Sbjct: 431  ILQLEVEEDIVRRARLRESYYGTYDNCDDHDDVNDDQLYHQPVRMSCVNSSDILRSARNA 490

Query: 345  LNQYPRFSLDGKDAMYRSSFRNITPVMGGGYKDGRKSVCCGSGLTERIXXXXXXXXXIEK 524
            LNQYPRFSLDGKDAMYRSSFR            G +   CG   T +            +
Sbjct: 491  LNQYPRFSLDGKDAMYRSSFRRQLGTSADMTIQGGRRSHCGDQRTSKRSSQMSL-----E 545

Query: 525  NLNLPHTIGGKSVIWCKPSVVAKLMGLEAMPIPITRKLGKGRLGCKVKSQNLRRAER 695
               LP T+ G+SV+WCK  VVAKLMGLE +P+P+  K GK +LG  +K + LRR ER
Sbjct: 546  TKRLPRTVAGESVVWCKTGVVAKLMGLEMIPVPVKGKTGKDKLGTLLKRERLRRRER 602


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