BLASTX nr result

ID: Coptis23_contig00009438 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009438
         (821 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEC10962.1| 40S ribosomal protein s10 [Camellia sinensis]          191   2e-46
gb|ABB55361.1| 40S ribosomal protein S10-like [Solanum tuberosum...   189   5e-46
ref|XP_002278759.1| PREDICTED: 40S ribosomal protein S10-like [V...   189   6e-46
emb|CBI34383.3| unnamed protein product [Vitis vinifera]              189   6e-46
ref|XP_002273286.2| PREDICTED: 40S ribosomal protein S10-like [V...   189   8e-46

>gb|AEC10962.1| 40S ribosomal protein s10 [Camellia sinensis]
          Length = 196

 Score =  191 bits (484), Expect = 2e-46
 Identities = 98/149 (65%), Positives = 103/149 (69%)
 Frame = -2

Query: 820 RREISKYLFQEGVCFAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWY 641
           R+EI KYLFQEGVC+AKKD+NLAKHP+IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWY
Sbjct: 8   RKEICKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWY 67

Query: 640 LTNDGIEFLRTYLNLPSEIVPATLKKSLKPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 461
           LTNDGIEFLRTYLNLPSEIVPATLKKS KPL                             
Sbjct: 68  LTNDGIEFLRTYLNLPSEIVPATLKKSAKPLGRPMGGPPGDRPRGPPRFEGDRPRFGDRD 127

Query: 460 XXXXXXXXXXXXXXXGEKGGAPAEFQPSF 374
                          GEKGGAPA+FQPSF
Sbjct: 128 GYRGGPRGGPPGEFGGEKGGAPADFQPSF 156


>gb|ABB55361.1| 40S ribosomal protein S10-like [Solanum tuberosum]
           gi|82400160|gb|ABB72819.1| 40S ribosomal protein
           S10-like protein [Solanum tuberosum]
          Length = 180

 Score =  189 bits (481), Expect = 5e-46
 Identities = 100/149 (67%), Positives = 104/149 (69%)
 Frame = -2

Query: 820 RREISKYLFQEGVCFAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWY 641
           RREISKYLFQEGVCFAKKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWY
Sbjct: 8   RREISKYLFQEGVCFAKKDYNLAKHPNIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWY 67

Query: 640 LTNDGIEFLRTYLNLPSEIVPATLKKSLKPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 461
           LTNDGIEFLRTYLNLPSEIVPATLKKS KPL                             
Sbjct: 68  LTNDGIEFLRTYLNLPSEIVPATLKKSAKPL-GRPMGGPPGDRPRGPPRFEGDRPRFGDR 126

Query: 460 XXXXXXXXXXXXXXXGEKGGAPAEFQPSF 374
                          GEKGGAPA++QP+F
Sbjct: 127 DGYRAGPRGPPGEFGGEKGGAPADYQPAF 155


>ref|XP_002278759.1| PREDICTED: 40S ribosomal protein S10-like [Vitis vinifera]
          Length = 180

 Score =  189 bits (480), Expect = 6e-46
 Identities = 99/149 (66%), Positives = 104/149 (69%)
 Frame = -2

Query: 820 RREISKYLFQEGVCFAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWY 641
           RREISKYLFQEGVC+AKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWY
Sbjct: 8   RREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWY 67

Query: 640 LTNDGIEFLRTYLNLPSEIVPATLKKSLKPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 461
           LTNDGIEFLRTYLNLPSEIVPATLKKS+KP                              
Sbjct: 68  LTNDGIEFLRTYLNLPSEIVPATLKKSVKP---AGRPMGPPGDRPRGPPRFEGDRPRFGD 124

Query: 460 XXXXXXXXXXXXXXXGEKGGAPAEFQPSF 374
                          G+KGGAPA++QPSF
Sbjct: 125 RDGYRGGPRGPPGEFGDKGGAPADYQPSF 153


>emb|CBI34383.3| unnamed protein product [Vitis vinifera]
          Length = 210

 Score =  189 bits (480), Expect = 6e-46
 Identities = 99/149 (66%), Positives = 104/149 (69%)
 Frame = -2

Query: 820 RREISKYLFQEGVCFAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWY 641
           RREISKYLFQEGVC+AKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWY
Sbjct: 38  RREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWY 97

Query: 640 LTNDGIEFLRTYLNLPSEIVPATLKKSLKPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 461
           LTNDGIEFLRTYLNLPSEIVPATLKKS+KP                              
Sbjct: 98  LTNDGIEFLRTYLNLPSEIVPATLKKSVKP---AGRPMGPPGDRPRGPPRFEGDRPRFGD 154

Query: 460 XXXXXXXXXXXXXXXGEKGGAPAEFQPSF 374
                          G+KGGAPA++QPSF
Sbjct: 155 RDGYRGGPRGPPGEFGDKGGAPADYQPSF 183


>ref|XP_002273286.2| PREDICTED: 40S ribosomal protein S10-like [Vitis vinifera]
          Length = 187

 Score =  189 bits (479), Expect = 8e-46
 Identities = 99/149 (66%), Positives = 104/149 (69%)
 Frame = -2

Query: 820 RREISKYLFQEGVCFAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWY 641
           RREISKYLFQEGVC+AKKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWY
Sbjct: 15  RREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWY 74

Query: 640 LTNDGIEFLRTYLNLPSEIVPATLKKSLKPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 461
           LTNDGIEFLRTYLNLPSEIVPATLKKS+KP                              
Sbjct: 75  LTNDGIEFLRTYLNLPSEIVPATLKKSVKP-PGRPMGGPPGDRPRGPPRFDGDRPRFGDR 133

Query: 460 XXXXXXXXXXXXXXXGEKGGAPAEFQPSF 374
                          G+KGGAPA+FQPSF
Sbjct: 134 DGYRGGPRGPPGEFGGDKGGAPADFQPSF 162


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