BLASTX nr result

ID: Coptis23_contig00009437 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009437
         (795 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22439.3| unnamed protein product [Vitis vinifera]              221   2e-55
emb|CAN60964.1| hypothetical protein VITISV_013873 [Vitis vinifera]   211   1e-52
ref|XP_002264967.2| PREDICTED: uncharacterized protein LOC100251...   197   3e-48
ref|XP_002532426.1| conserved hypothetical protein [Ricinus comm...   196   4e-48
ref|XP_004155483.1| PREDICTED: uncharacterized LOC101211967 [Cuc...   184   2e-44

>emb|CBI22439.3| unnamed protein product [Vitis vinifera]
          Length = 673

 Score =  221 bits (562), Expect = 2e-55
 Identities = 133/238 (55%), Positives = 159/238 (66%), Gaps = 7/238 (2%)
 Frame = +3

Query: 3    RNLLQVTNEKVKALMELAQLRQDYQLLQENSSQRMKQGTSLLAECGDH-----EKDGKLK 167
            RNLLQVTNEKVKALMELAQL+Q+YQLLQE  S  MKQG + LA+ G+      E+DGKLK
Sbjct: 425  RNLLQVTNEKVKALMELAQLKQEYQLLQEKISHDMKQG-NFLADIGEKRNATLERDGKLK 483

Query: 168  NMLKKTSLRRWIWKPDFGIIETGAHIXXXXXXXXXXXXYPVDFARMKIENATLKEFIESM 347
            N+LKKT LRRWI   D+   +  AH+            Y +DFARMKIENATLKE +ES+
Sbjct: 484  NLLKKTYLRRWIGALDYSGNQAEAHLNSEGNFSGRKSNYSMDFARMKIENATLKESMESI 543

Query: 348  DHLTSSVHRLRLSLLKAKDXXXXXXXXXXXIAVLDGIITEAKLVRTALGSSLPVSSLAEV 527
            +HLTSS+ RLRL+LL+AK+           +  LD II EAKLV+TALGSSLPVS  AE 
Sbjct: 544  EHLTSSIRRLRLTLLEAKESVTSGGTVSSVLEALDDIINEAKLVKTALGSSLPVSWSAEA 603

Query: 528  DTGPIGETHALKKPTDGC--RVPNSEKLDSVSAAGFEMVELLILAAHTLKEGLIEKSS 695
            D    GE+        GC     +SEK+DSV AAGFEMVELLI A   LK+  I++SS
Sbjct: 604  DGESFGES---MDNAPGCFHGDSSSEKIDSVCAAGFEMVELLIFAVQVLKDSTIKRSS 658


>emb|CAN60964.1| hypothetical protein VITISV_013873 [Vitis vinifera]
          Length = 655

 Score =  211 bits (538), Expect = 1e-52
 Identities = 128/233 (54%), Positives = 154/233 (66%), Gaps = 7/233 (3%)
 Frame = +3

Query: 18   VTNEKVKALMELAQLRQDYQLLQENSSQRMKQGTSLLAECGDH-----EKDGKLKNMLKK 182
            VTNEKVKALMELAQL+Q+YQLLQE  S  MKQG + LA+ G+      E+DGKLKN+LKK
Sbjct: 412  VTNEKVKALMELAQLKQEYQLLQEKISHDMKQG-NFLADIGEKRNATLERDGKLKNLLKK 470

Query: 183  TSLRRWIWKPDFGIIETGAHIXXXXXXXXXXXXYPVDFARMKIENATLKEFIESMDHLTS 362
            T LRRWI   D+   +  AH+            Y +DFARMKIENATLKE +ES++HLTS
Sbjct: 471  TYLRRWIGALDYSGNQAEAHLNSEGNFSGRKSNYSMDFARMKIENATLKESMESIEHLTS 530

Query: 363  SVHRLRLSLLKAKDXXXXXXXXXXXIAVLDGIITEAKLVRTALGSSLPVSSLAEVDTGPI 542
            S+ RLRL+LL+AK+           +  LD II EAKLV+TALGSSLPVS  AE D    
Sbjct: 531  SIRRLRLTLLEAKESVTSGGTVSSVLEALDDIINEAKLVKTALGSSLPVSWSAEADGESF 590

Query: 543  GETHALKKPTDGC--RVPNSEKLDSVSAAGFEMVELLILAAHTLKEGLIEKSS 695
            GE+        GC     +SEK+DSV AAGFEMVELLI A   LK+  I++SS
Sbjct: 591  GES---MDNAPGCFHGDSSSEKIDSVCAAGFEMVELLIFAVQVLKDSTIKRSS 640


>ref|XP_002264967.2| PREDICTED: uncharacterized protein LOC100251573 [Vitis vinifera]
          Length = 721

 Score =  197 bits (500), Expect = 3e-48
 Identities = 132/286 (46%), Positives = 159/286 (55%), Gaps = 55/286 (19%)
 Frame = +3

Query: 3    RNLLQVTNEKVKALMELAQLRQDYQLLQE------------------------------- 89
            RNLLQVTNEKVKALMELAQL+Q+YQLLQ+                               
Sbjct: 425  RNLLQVTNEKVKALMELAQLKQEYQLLQDIRSALCTWSIDGLQIPVYMISIEGATAAANR 484

Query: 90   -----------------NSSQRMKQGTSLLAECGDH-----EKDGKLKNMLKKTSLRRWI 203
                               S  MKQG + LA+ G+      E+DGKLKN+LKKT LRRWI
Sbjct: 485  TLNAALLVLLLKGKSEGKISHDMKQG-NFLADIGEKRNATLERDGKLKNLLKKTYLRRWI 543

Query: 204  WKPDFGIIETGAHIXXXXXXXXXXXXYPVDFARMKIENATLKEFIESMDHLTSSVHRLRL 383
               D+   +  AH+            Y +DFARMKIENATLKE +ES++HLTSS+ RLRL
Sbjct: 544  GALDYSGNQAEAHLNSEGNFSGRKSNYSMDFARMKIENATLKESMESIEHLTSSIRRLRL 603

Query: 384  SLLKAKDXXXXXXXXXXXIAVLDGIITEAKLVRTALGSSLPVSSLAEVDTGPIGETHALK 563
            +LL+AK+           +  LD II EAKLV+TALGSSLPVS  AE D    GE+    
Sbjct: 604  TLLEAKESVTSGGTVSSVLEALDDIINEAKLVKTALGSSLPVSWSAEADGESFGES---M 660

Query: 564  KPTDGC--RVPNSEKLDSVSAAGFEMVELLILAAHTLKEGLIEKSS 695
                GC     +SEK+DSV AAGFEMVELLI A   LK+  I++SS
Sbjct: 661  DNAPGCFHGDSSSEKIDSVCAAGFEMVELLIFAVQVLKDSTIKRSS 706


>ref|XP_002532426.1| conserved hypothetical protein [Ricinus communis]
            gi|223527875|gb|EEF29967.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 658

 Score =  196 bits (499), Expect = 4e-48
 Identities = 121/240 (50%), Positives = 154/240 (64%), Gaps = 10/240 (4%)
 Frame = +3

Query: 3    RNLLQVTNEKVKALMELAQLRQDYQLLQENSSQRMKQGTSLLAECG----DHEKDGKLKN 170
            RNLLQVTNEKVKAL+ELAQL+Q YQ L E  S  +++G   + +       H+KDG+L+N
Sbjct: 422  RNLLQVTNEKVKALVELAQLKQAYQQLHEKISHGIQEGNLSIDKVERRHFTHDKDGRLRN 481

Query: 171  MLKKTSLRRWIWKPDFGIIETGAHIXXXXXXXXXXXXYPVDFARMKIENATLKEFIESMD 350
            +LK+T L+RW+     G+ E  AH+              +DFARMKIENATLKE +ESM+
Sbjct: 482  LLKRTYLKRWMGTSGIGVNEEEAHLNNEGNFSSRTHS-SIDFARMKIENATLKESMESME 540

Query: 351  HLTSSVHRLRLSLLKAKDXXXXXXXXXXXIAVLDGIITEAKLVRTALGSSLPVSSLAE-V 527
            HLTSS+HRLR +LLK K+           +  L  I++EAKL++TA GSSLP+S  AE V
Sbjct: 541  HLTSSIHRLRCALLKVKESAACEGTCVGVLEALHDIVSEAKLLKTAFGSSLPISWSAEAV 600

Query: 528  DTGPIGETHALKKPTDGCRVPNSEKLDSVSAAGFEMVELLILAAHTL-----KEGLIEKS 692
            DT   G TH   +P D     + EK+DSVSAAGFEMVELLILAA  L     K+GL + S
Sbjct: 601  DTSTGGSTH--NEPGDLDEDSSYEKMDSVSAAGFEMVELLILAAQILEAYPTKQGLRDAS 658


>ref|XP_004155483.1| PREDICTED: uncharacterized LOC101211967 [Cucumis sativus]
          Length = 641

 Score =  184 bits (467), Expect = 2e-44
 Identities = 113/223 (50%), Positives = 141/223 (63%), Gaps = 1/223 (0%)
 Frame = +3

Query: 3    RNLLQVTNEKVKALMELAQLRQDYQLLQENSSQRMKQGTSLLA-ECGDHEKDGKLKNMLK 179
            RNLLQVT+EKVKALMELAQ++Q+ QLL+E S   +K+G   +  +   HE++GKLK +LK
Sbjct: 411  RNLLQVTHEKVKALMELAQVKQELQLLKEKSVHDLKRGADTVERKLVTHEREGKLKGLLK 470

Query: 180  KTSLRRWIWKPDFGIIETGAHIXXXXXXXXXXXXYPVDFARMKIENATLKEFIESMDHLT 359
             T LRRW+  P+    E  AH+              VDFAR+KIENATL+E IESM+ LT
Sbjct: 471  GTYLRRWVGTPEISGSEAAAHLDNEENYSSRKSA--VDFARIKIENATLRESIESMEQLT 528

Query: 360  SSVHRLRLSLLKAKDXXXXXXXXXXXIAVLDGIITEAKLVRTALGSSLPVSSLAEVDTGP 539
            SS+HRLRL LLKAK+           +  L GII EAKL++TAL SSLP+S  AEV+ G 
Sbjct: 529  SSIHRLRLYLLKAKESATSEGPGTSVLEGLKGIINEAKLIKTALCSSLPISWSAEVNAGS 588

Query: 540  IGETHALKKPTDGCRVPNSEKLDSVSAAGFEMVELLILAAHTL 668
              ET        G    +  K+D VSAAGFEMVELL+  A  L
Sbjct: 589  SEETLHDSHDVLGEGDSSLGKIDFVSAAGFEMVELLVSVAELL 631


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