BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009430
         (717 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35204.3| unnamed protein product [Vitis vinifera]              100   4e-19
emb|CBI21970.3| unnamed protein product [Vitis vinifera]               97   3e-18
emb|CBI35192.3| unnamed protein product [Vitis vinifera]               96   7e-18
ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containi...    95   2e-17
ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containi...    93   5e-17

>emb|CBI35204.3| unnamed protein product [Vitis vinifera]
          Length = 543

 Score =  100 bits (248), Expect = 4e-19
 Identities = 73/252 (28%), Positives = 122/252 (48%), Gaps = 18/252 (7%)
 Frame = +1

Query: 13  FLGHVRDRCQSDTVGLEEICGSFYVLIKFIHSPSRPVSINHFDQLLGTVYRMRNFPTAFS 192
           FL    +R  S ++    I G+     + +     P +++ F++LL ++ +M++  T  S
Sbjct: 24  FLSLSHNRFHSKSLHFNTIDGAISSFNRMLRMQPPPSTVD-FNKLLTSIAKMKHHSTLLS 82

Query: 193 LWRAMQFFGIQPSPVTVNILTNCACSIDPG-VDRGFAVFGMSLKRGIGLKVATLSTLLTM 369
           L   M  FGI P+  T++IL N  C ++ G +     +F   +  G    V T  TL+  
Sbjct: 83  LSHQMDSFGIPPNIYTLHILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLING 142

Query: 370 VFRKGDPG--------------QWNVHVRKAAEMIDSICTNGGRAKEALHLVEEISQSIK 507
           + + G+                Q NV       +IDS+C +  +  EA +L  E+     
Sbjct: 143 LCKVGNTSAAIRLLGSMVQKNCQPNVFAYNT--IIDSLCKDR-QVTEAFNLFSEMVTKGI 199

Query: 508 NPTLFTYTSLFHSLCISRRWKK---LFAESLDLEILPDPPKLCDALIDSLCREGMIPDAH 678
           +P +FTY SL H+LC    WK    L  E +D +I+PD     + ++D+LC+EG + +AH
Sbjct: 200 SPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSF-NTVVDALCKEGKVTEAH 258

Query: 679 GVFDMIIERGFC 714
            V D +I+RG C
Sbjct: 259 DVVDKMIQRGGC 270


>emb|CBI21970.3| unnamed protein product [Vitis vinifera]
          Length = 375

 Score = 97.4 bits (241), Expect = 3e-18
 Identities = 70/218 (32%), Positives = 112/218 (51%), Gaps = 18/218 (8%)
 Frame = +1

Query: 118 PVSINHFDQLLGTVYRMRNFPTAFSLWRAMQFFGIQPSPVTVNILTNCACSIDPGVDRGF 297
           P SI  F +LL ++ RM+++ T  SL++ M  FGI  +  T+NIL N  C ++  +   F
Sbjct: 7   PPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLN-RLGFAF 65

Query: 298 AVFGMSLKRGIGLKVATLSTLLTMVFRKGDPGQ------------WNVHVRKAAEMIDSI 441
           +V G  LK G     AT +TL+  +  +G  G+            +   V     +I+ +
Sbjct: 66  SVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGL 125

Query: 442 CTNGGRAKEALHLVEEISQSIKNPTLFTYTSLFHSLCISRRWK---KLFAESLDLEILPD 612
           C +  +  EAL L  ++     +P  FTY+SL H LCI   WK   +LF   +  +I+PD
Sbjct: 126 CKD-RQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPD 184

Query: 613 PPKLCDALIDSLCREGMI---PDAHGVFDMIIERGFCP 717
                + L+D+LC+EGMI     A G+F+ + ++G  P
Sbjct: 185 QLTF-NTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIP 221


>emb|CBI35192.3| unnamed protein product [Vitis vinifera]
          Length = 1001

 Score = 95.9 bits (237), Expect = 7e-18
 Identities = 67/223 (30%), Positives = 112/223 (50%), Gaps = 15/223 (6%)
 Frame = +1

Query: 94  KFIHSPSRPVSINHFDQLLGTVYRMRNFPTAFSLWRAMQFFGIQPSPVTVNILTNCACSI 273
           + +H    P +++ F++LL ++ + ++  T  SL R M  FGI P   T+ I+ N  C +
Sbjct: 35  RMLHKQPPPSTVD-FNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHL 93

Query: 274 DPGVDRGFAVFGMSLKRGIGLKVATLSTLLTMVFRKGDPGQ------------WNVHVRK 417
           +  VD  F+     LK G      T +TL+  +  +G  G+            +  +V  
Sbjct: 94  NR-VDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVT 152

Query: 418 AAEMIDSICTNGGRAKEALHLVEEISQSIKNPTLFTYTSLFHSLCISRRWKK---LFAES 588
              +I+ +C +  +  EA ++  E+     +P + TY SL H LC    WK    L  E 
Sbjct: 153 YGTLINGLCKDR-QVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEM 211

Query: 589 LDLEILPDPPKLCDALIDSLCREGMIPDAHGVFDMIIERGFCP 717
           +D +I+PD   L + ++D+LC+EGM+ +AH V DM+I RG  P
Sbjct: 212 VDSKIMPDVFTL-NTVVDALCKEGMVAEAHDVVDMMIHRGVEP 253


>ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 550

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 72/254 (28%), Positives = 116/254 (45%), Gaps = 56/254 (22%)
 Frame = +1

Query: 124 SINHFDQLLGTVYRMRNFPTAFSLWRAMQFFGIQPSPVTVNILTNCACSIDPGVDRGFAV 303
           S+  F+ +LG++ +M+++PTA SL + M   GI PS VT++IL NC C +   +   F+V
Sbjct: 77  SVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSILINCYCHLG-HMGFAFSV 135

Query: 304 FGMSLKRGIGLKVATLSTLLTMVFRKGDPGQWNVHVRKAAEMIDSICTNG---------- 453
            GM LKRG  L   TL+T++  +   G+       VRKA E  DS+   G          
Sbjct: 136 LGMVLKRGYQLNAITLTTIMKGLCINGE-------VRKALEFHDSVVAQGFLLDEVTYGT 188

Query: 454 --------GRAKEALHLVEEISQSIK---------------------------------- 507
                   G  +EA  L+ ++   +                                   
Sbjct: 189 LINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRG 248

Query: 508 -NPTLFTYTSLFHSLCISRRWK---KLFAESLDLEILPDPPKLCDALIDSLCREGMIPDA 675
            +P +FTYT L H  C   +W+   +L  + +D  +  +     + LID+LC++GM+  A
Sbjct: 249 IDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLN-VYTYNILIDALCKKGMLGKA 307

Query: 676 HGVFDMIIERGFCP 717
           H + +++IERG  P
Sbjct: 308 HDMRNLMIERGQRP 321


>ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Vitis vinifera]
          Length = 539

 Score = 93.2 bits (230), Expect = 5e-17
 Identities = 71/250 (28%), Positives = 122/250 (48%), Gaps = 15/250 (6%)
 Frame = +1

Query: 13  FLGHVRDRCQSDTVGLEEICGSFYVLIKFIHSPSRPVSINHFDQLLGTVYRMRNFPTAFS 192
           FL   ++  QS ++    +  +     + +H    P  I  F +LL ++ +M+++ T  S
Sbjct: 19  FLSSSQNNFQSKSLHFNTLDDALSSFHRMLHMHPPP-PIFEFAKLLTSIAKMKHYSTVLS 77

Query: 193 LWRAMQFFGIQPSPVTVNILTNCACSIDPGVDRGFAVFGMSLKRGIGLKVATLSTLLTMV 372
           L + M  FGI P   T+ I+ N  C ++  VD   +V    LK G     AT +TL+  +
Sbjct: 78  LSKKMDSFGIPPDVYTLTIVINSFCHLNR-VDFALSVLAKILKLGHQPDTATFTTLVRGL 136

Query: 373 FRKGDPGQ------------WNVHVRKAAEMIDSICTNGGRAKEALHLVEEISQSIKNPT 516
              G  G+            +  +V     +++ +C +  +  EAL+L  E+     +P 
Sbjct: 137 CVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDR-QLTEALNLFSEMIAKGISPD 195

Query: 517 LFTYTSLFHSLCISRRWK---KLFAESLDLEILPDPPKLCDALIDSLCREGMIPDAHGVF 687
           +FTY SL H+LC    WK    L  E +  +I+P+   L + ++D+LC+EG + +AH V 
Sbjct: 196 IFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSL-NIVVDALCKEGKVTEAHDVV 254

Query: 688 DMIIERGFCP 717
           DM+I+ G  P
Sbjct: 255 DMMIQGGVEP 264