BLASTX nr result

ID: Coptis23_contig00009429 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009429
         (1537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311465.1| predicted protein [Populus trichocarpa] gi|2...   182   3e-43
ref|XP_002280530.1| PREDICTED: uncharacterized protein LOC100256...   178   4e-42
emb|CAN62793.1| hypothetical protein VITISV_024907 [Vitis vinifera]   177   9e-42
ref|XP_002276669.1| PREDICTED: uncharacterized protein LOC100266...   176   1e-41
ref|XP_002315934.1| predicted protein [Populus trichocarpa] gi|2...   174   6e-41

>ref|XP_002311465.1| predicted protein [Populus trichocarpa] gi|222851285|gb|EEE88832.1|
           predicted protein [Populus trichocarpa]
          Length = 262

 Score =  182 bits (461), Expect = 3e-43
 Identities = 119/268 (44%), Positives = 144/268 (53%), Gaps = 12/268 (4%)
 Frame = +3

Query: 201 MAIDLWSNMENSSLGISPRISFSHDICQA-EVVTIERH---RSDSLLLESNDFDFCISES 368
           MAID+ S  E SS GISPRISFSHD+ Q  + V+IE H   R DS LL+S DFDFC   S
Sbjct: 1   MAIDVCS--EISSAGISPRISFSHDLNQTTDAVSIEDHYHRRLDSSLLDS-DFDFCFGNS 57

Query: 369 FEQDSSCAEELFSDGKILPLEIKKQVLPPKPP-------THPTSNN-ENSKKESLKEIME 524
           F Q+ S A+ELFS+GKILP+EIKK ++  K         + P  N+ E ++K+ LKE + 
Sbjct: 58  FVQELSSADELFSNGKILPVEIKKHIISSKDTDQLKSLISQPQQNSSETTEKKQLKEFLS 117

Query: 525 QXXXXXXXXXXXXXXXXXXXXXXXXXXCGNGYKRSLICSLPLLSRSNSTGSAPTPKRSSS 704
                                      C +   + LI SL  LSRSNSTGSAP P +   
Sbjct: 118 MSLDADEKPASKSFWQFKRSNSLN---CDSTRSKGLIRSLHFLSRSNSTGSAPNPPKQGM 174

Query: 705 LKDNNHNKHLPKTPSSNGXXXXXXXXXXXXXXXXXXXXXXKKNYGSYNNGVRISPLLNVP 884
           L        L K  S                          +  GSY NGVRISP+LN+P
Sbjct: 175 LSKETQKPQLQKQASVPSRKSSVPSSAAFYSYNSQQKPPLLRKCGSYGNGVRISPVLNIP 234

Query: 885 PPYISKGTVNLFGLGSLFCNGKEKNKKK 968
           PPYIS+GTVNLFGLGSLFCNGK K KK+
Sbjct: 235 PPYISRGTVNLFGLGSLFCNGKVKKKKR 262


>ref|XP_002280530.1| PREDICTED: uncharacterized protein LOC100256597 [Vitis vinifera]
          Length = 250

 Score =  178 bits (451), Expect = 4e-42
 Identities = 122/271 (45%), Positives = 151/271 (55%), Gaps = 15/271 (5%)
 Frame = +3

Query: 201 MAIDLWSNMENSSLGISPRISFSHDICQAEVVTIERHRSDSLLLESNDFDFCISESFEQD 380
           MAI+L S  ++ S+ +SPRISFSHD+CQA+VV +E   S S    +NDFDFC+ ESF QD
Sbjct: 1   MAIELCS--DSCSMCMSPRISFSHDLCQADVVPVEHDPSQSNS-PTNDFDFCVYESFYQD 57

Query: 381 SSCAEELFSDGKILPLEIKKQVLPPK-------------PPTHPTSNNENSKKESLKEIM 521
           +S A+ELF DGKILP++IKK++  PK             PP  PT NN   KKES +EI 
Sbjct: 58  TSSADELFYDGKILPIQIKKKIATPKSTVQQPKPPLPLAPPPLPTQNNR--KKESSREIK 115

Query: 522 EQXXXXXXXXXXXXXXXXXXXXXXXXXXCGNGYKRSLICSLPLLSRSNSTGSAPTPKRSS 701
                                       C +GY RSL C LPLLSRSNSTGS    KRS+
Sbjct: 116 RTINEVYEKQNSKSFWRFKRSTSLN---CSSGYARSL-CPLPLLSRSNSTGSVSNAKRSA 171

Query: 702 -SLKDNNHNKHLPKTPSSNGXXXXXXXXXXXXXXXXXXXXXXKKNYGSYNNGVRISPLLN 878
            S KD N+ K+  K PS                         KK YGS++NGVRI+P+LN
Sbjct: 172 LSSKDGNNIKNWHKHPS-----VAPIKSPHSSSSTSYQKPPLKKTYGSHSNGVRINPVLN 226

Query: 879 VPPPYISKGTVNLFGLGSLFCNGKEK-NKKK 968
           VP P       +LFGLGS+F NGK+K NK+K
Sbjct: 227 VPTP-------SLFGLGSIFSNGKDKINKRK 250


>emb|CAN62793.1| hypothetical protein VITISV_024907 [Vitis vinifera]
          Length = 250

 Score =  177 bits (448), Expect = 9e-42
 Identities = 122/271 (45%), Positives = 150/271 (55%), Gaps = 15/271 (5%)
 Frame = +3

Query: 201 MAIDLWSNMENSSLGISPRISFSHDICQAEVVTIERHRSDSLLLESNDFDFCISESFEQD 380
           MAI+L S  ++ S+ +SPRISFSHD+CQA+VV +E   S S    +NDFDFC+ ESF QD
Sbjct: 1   MAIELCS--DSCSMCMSPRISFSHDLCQADVVPVEHXPSQSNS-PTNDFDFCVYESFYQD 57

Query: 381 SSCAEELFSDGKILPLEIKKQVLPPK-------------PPTHPTSNNENSKKESLKEIM 521
           +S A+ELF DGKILP++IKK++  PK             PP  PT NN   KKES +EI 
Sbjct: 58  TSSADELFYDGKILPIQIKKKIATPKSTVQQPKPPLPLAPPPLPTQNNR--KKESSREIK 115

Query: 522 EQXXXXXXXXXXXXXXXXXXXXXXXXXXCGNGYKRSLICSLPLLSRSNSTGSAPTPKRSS 701
                                       C +GY RSL C LPLLSRSNSTGS    KRS+
Sbjct: 116 RTINEVYEKQNSKSFWRFKRSTSLN---CSSGYARSL-CPLPLLSRSNSTGSVSNAKRSA 171

Query: 702 -SLKDNNHNKHLPKTPSSNGXXXXXXXXXXXXXXXXXXXXXXKKNYGSYNNGVRISPLLN 878
            S KD N+ K+  K PS                         KK YGS++NGVRI+P+LN
Sbjct: 172 LSSKDGNNIKNWHKHPS-----VAPIKSPHSSSSTSYQKPPLKKTYGSHSNGVRINPVLN 226

Query: 879 VPPPYISKGTVNLFGLGSLFCNGKEK-NKKK 968
           VP P       +LFGLGS+F NGK+K NK K
Sbjct: 227 VPTP-------SLFGLGSIFSNGKDKINKXK 250


>ref|XP_002276669.1| PREDICTED: uncharacterized protein LOC100266297 [Vitis vinifera]
          Length = 252

 Score =  176 bits (446), Expect = 1e-41
 Identities = 113/250 (45%), Positives = 142/250 (56%), Gaps = 10/250 (4%)
 Frame = +3

Query: 249 SPRISFSHDICQAEVVTIERHRSD----SLLLESNDFDFCISESFEQDSSCAEELFSDGK 416
           SPRISFS+D CQA+V +I+  +S     S L  S DFDFC+S SFE +SS A+ELFS+G 
Sbjct: 10  SPRISFSNDFCQADVASIDHCKSRNSELSSLDSSPDFDFCVSTSFEHESSSADELFSNGI 69

Query: 417 ILPLEIKKQVLPPK-----PPTHPTSNNENSKKESLKEIMEQXXXXXXXXXXXXXXXXXX 581
           ILP++I+++ + P+     PP    S NE+ KKES K I                     
Sbjct: 70  ILPIKIQERTVAPRSVASLPPLPSPSTNESLKKESSKGIAVSSCESQEKLQSSKSFWPFK 129

Query: 582 XXXXXXXXCGNGYKRSLICSLPLLSRSNSTGSAPTPKRSSSLKDNNHNKHLPKTPSSNGX 761
                   C N ++RSL+CSLPLLSRSNSTGS    KR+S  +++     + K+ SS+  
Sbjct: 130 RSSSLN--CDNVHRRSLMCSLPLLSRSNSTGSVQNSKRTSK-QNSQKQPSMAKSSSSSSS 186

Query: 762 XXXXXXXXXXXXXXXXXXXXXKKNYG-SYNNGVRISPLLNVPPPYISKGTVNLFGLGSLF 938
                                KKNYG SY NGV ISP++NV P YISKGT NLFGLGSLF
Sbjct: 187 ASSTNFYTYPVPQKPPL----KKNYGGSYGNGVWISPVINVSPAYISKGTANLFGLGSLF 242

Query: 939 CNGKEKNKKK 968
            NGKEK  KK
Sbjct: 243 RNGKEKKSKK 252


>ref|XP_002315934.1| predicted protein [Populus trichocarpa] gi|222864974|gb|EEF02105.1|
           predicted protein [Populus trichocarpa]
          Length = 264

 Score =  174 bits (441), Expect = 6e-41
 Identities = 118/270 (43%), Positives = 140/270 (51%), Gaps = 15/270 (5%)
 Frame = +3

Query: 201 MAIDLWSNMENSSLGISPRISFSHDICQA-EVVTIERH---RSDSLLLESNDFDFCISES 368
           MAID+ S  E SS GISPRISFSHD+ Q  + V+IE H   R DS LL+S DFDFCI  S
Sbjct: 1   MAIDVCS--EISSAGISPRISFSHDLNQTTDAVSIEDHHHRRLDSSLLDS-DFDFCIGNS 57

Query: 369 FEQDSSCAEELFSDGKILPLEIKKQVLPPK-----------PPTHPTSNNENSKKESLKE 515
           F Q+ S A+ELFS+GKILP+EIKK  +  K            P H TS     KK+ LKE
Sbjct: 58  FVQELSSADELFSNGKILPVEIKKHSISSKGNNHQPKSLTSQPQHQTSTGTTEKKQ-LKE 116

Query: 516 IMEQXXXXXXXXXXXXXXXXXXXXXXXXXXCGNGYKRSLICSLPLLSRSNSTGSAPTPKR 695
            + +                          C +   + LI SL  LSRSNSTGSAP P +
Sbjct: 117 FLSESLDADEKPASKSFWQFKRSSSLN---CDSTRSKGLIRSLHFLSRSNSTGSAPNPPK 173

Query: 696 SSSLKDNNHNKHLPKTPSSNGXXXXXXXXXXXXXXXXXXXXXXKKNYGSYNNGVRISPLL 875
            + L        L K  S                          +  GS+ NG RISP+L
Sbjct: 174 QAMLSKETQKPKLQKQASVPSRKPSVPSSAAFYSYNPQQKPPLLRKCGSHGNGFRISPVL 233

Query: 876 NVPPPYISKGTVNLFGLGSLFCNGKEKNKK 965
           N+PPPYIS+G VN FGLGSLFCNGK K KK
Sbjct: 234 NIPPPYISRGAVNPFGLGSLFCNGKVKRKK 263


Top