BLASTX nr result

ID: Coptis23_contig00009423 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009423
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537681.1| PREDICTED: ubiquilin-1-like [Glycine max]         102   4e-20
ref|XP_003517138.1| PREDICTED: ubiquilin-4-like [Glycine max]          98   6e-19
ref|XP_002521706.1| plant ubiquilin, putative [Ricinus communis]...    97   2e-18
ref|XP_002306425.1| predicted protein [Populus trichocarpa] gi|2...    95   5e-18
ref|XP_003519686.1| PREDICTED: ubiquilin-1-like [Glycine max]          94   2e-17

>ref|XP_003537681.1| PREDICTED: ubiquilin-1-like [Glycine max]
          Length = 541

 Score =  102 bits (253), Expect = 4e-20
 Identities = 60/144 (41%), Positives = 76/144 (52%), Gaps = 17/144 (11%)
 Frame = -2

Query: 383 IEASPEGFNMLRRMYETVQEPLMNATTMAANSGSQMRDI-XXXXXXXXXXXXXXXXAPNT 207
           IE+SPEGFNMLRRMYE VQEP +NATTMA N+G+    +                  PNT
Sbjct: 253 IESSPEGFNMLRRMYENVQEPFLNATTMAGNTGNDAAAVRNQSTNPSTTNSEATSPVPNT 312

Query: 206 NPLPNPWSNAGAAGVAQRNTARSTRA---XXXXXXXXXXXXXLPNMD------------- 75
           NPLPNPWS+ G  G  Q NT RST                  LP+++             
Sbjct: 313 NPLPNPWSSTGTGGGGQTNTRRSTTTGGDARQPAPTGLGGLGLPDLEGMMGGMPDTAMLT 372

Query: 74  QFVPTPAVAQRIRSLLSNPQAMNR 3
           Q +  PA++Q ++S+LSNPQ MN+
Sbjct: 373 QLMQNPAISQMMQSILSNPQTMNQ 396


>ref|XP_003517138.1| PREDICTED: ubiquilin-4-like [Glycine max]
          Length = 541

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 60/146 (41%), Positives = 76/146 (52%), Gaps = 19/146 (13%)
 Frame = -2

Query: 383 IEASPEGFNMLRRMYETVQEPLMNATTMAANSGSQMRDI-XXXXXXXXXXXXXXXXAPNT 207
           IE+SPEGFNMLRRMYE VQEP +NATTMA N+G+    +                  PNT
Sbjct: 252 IESSPEGFNMLRRMYENVQEPFLNATTMAGNTGNDAAAVRNQSTNPSTTNSEATSPVPNT 311

Query: 206 NPLPNPWSNAGAAGVAQRNTARSTRA---XXXXXXXXXXXXXLPNMD------------- 75
           NPLPNPWS+ G  G  Q NT RST                  LP+++             
Sbjct: 312 NPLPNPWSSTGTGG-GQNNTRRSTTTGGEARQSTPTGLGGLGLPDLEGMLGGTGMPDAAM 370

Query: 74  --QFVPTPAVAQRIRSLLSNPQAMNR 3
             Q +  PA++Q ++S+LSNPQ MN+
Sbjct: 371 LTQLMQNPAISQMMQSILSNPQTMNQ 396


>ref|XP_002521706.1| plant ubiquilin, putative [Ricinus communis]
           gi|223539097|gb|EEF40693.1| plant ubiquilin, putative
           [Ricinus communis]
          Length = 548

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 64/158 (40%), Positives = 78/158 (49%), Gaps = 31/158 (19%)
 Frame = -2

Query: 383 IEASPEGFNMLRRMYETVQEPLMNATTMAAN----------------SGSQMRDIXXXXX 252
           IE+SPEGFNMLRRMYETVQEP +NATTMA N                +G+Q  D      
Sbjct: 246 IESSPEGFNMLRRMYETVQEPFLNATTMAGNTGGDSANPFAALLGNQAGNQASDATTNPS 305

Query: 251 XXXXXXXXXXXAPNTNPLPNPWSNAGAAGVAQRNTARSTR------------AXXXXXXX 108
                      APNTNPLPNPW+  G  G A  NTARS+                     
Sbjct: 306 IASSESTTGSPAPNTNPLPNPWTATGTGG-ALNNTARSSNTGDARPQTPVGLGGLGLPEF 364

Query: 107 XXXXXXLPN---MDQFVPTPAVAQRIRSLLSNPQAMNR 3
                 +P+   M Q +  PA++Q ++SLLSNPQ MN+
Sbjct: 365 DSMFGAMPDSNVMSQMLQNPAISQMMQSLLSNPQYMNQ 402


>ref|XP_002306425.1| predicted protein [Populus trichocarpa] gi|222855874|gb|EEE93421.1|
           predicted protein [Populus trichocarpa]
          Length = 549

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 65/158 (41%), Positives = 78/158 (49%), Gaps = 31/158 (19%)
 Frame = -2

Query: 383 IEASPEGFNMLRRMYETVQEPLMNATTMAAN----------------SGSQMRDIXXXXX 252
           IE+SPEGFNMLRRMYETVQEP +NATTMA N                +G+Q RD      
Sbjct: 250 IESSPEGFNMLRRMYETVQEPFLNATTMAGNAGGDSANPFAALLGTQTGNQARDGSTNLS 309

Query: 251 XXXXXXXXXXXAPNTNPLPNPWSNAGAAGVAQRNTARS-----TRAXXXXXXXXXXXXXL 87
                      APNTNPLPNPWS+ G    AQ NT RS     TR              L
Sbjct: 310 TTSSETTTGSPAPNTNPLPNPWSSGG----AQTNTTRSNPTSDTRPQAPTGLGGLGLPDL 365

Query: 86  PNM----------DQFVPTPAVAQRIRSLLSNPQAMNR 3
            NM           Q +  PA++Q ++S +S+PQ MN+
Sbjct: 366 DNMFSAMPDAAMVSQLMQNPAISQMMQSFMSSPQYMNQ 403


>ref|XP_003519686.1| PREDICTED: ubiquilin-1-like [Glycine max]
          Length = 545

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 59/156 (37%), Positives = 77/156 (49%), Gaps = 29/156 (18%)
 Frame = -2

Query: 383 IEASPEGFNMLRRMYETVQEPLMNATTMAANSGS-----------QMRDIXXXXXXXXXX 237
           IE+SPEGFNMLRRMYE +QEP +NATTMA N+G+             RD           
Sbjct: 246 IESSPEGFNMLRRMYENIQEPFLNATTMAGNTGNNNAAVSGTHGGHARDPSTNPSTTSSE 305

Query: 236 XXXXXXAPNTNPLPNPWSNAGAAGVAQRNTARSTRA---XXXXXXXXXXXXXLPNMD--- 75
                  PNTNPLPNPWS+ G  G AQ N+ RS                   LP+++   
Sbjct: 306 ATAGSPLPNTNPLPNPWSSTGTGG-AQNNSRRSLTTGVDARQQGPTGLGGHGLPDLESML 364

Query: 74  ------------QFVPTPAVAQRIRSLLSNPQAMNR 3
                       Q +  PA++Q ++S+LSNPQ +N+
Sbjct: 365 GGSAMPDPALLTQLMQNPAISQMMQSMLSNPQTLNQ 400


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