BLASTX nr result

ID: Coptis23_contig00009422 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009422
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537681.1| PREDICTED: ubiquilin-1-like [Glycine max]         124   1e-26
ref|XP_003517138.1| PREDICTED: ubiquilin-4-like [Glycine max]         117   1e-24
ref|XP_002282473.2| PREDICTED: ubiquilin-1-like [Vitis vinifera]      114   6e-24
ref|XP_002521706.1| plant ubiquilin, putative [Ricinus communis]...   112   2e-23
ref|XP_002306425.1| predicted protein [Populus trichocarpa] gi|2...   112   3e-23

>ref|XP_003537681.1| PREDICTED: ubiquilin-1-like [Glycine max]
          Length = 541

 Score =  124 bits (310), Expect = 1e-26
 Identities = 68/144 (47%), Positives = 85/144 (59%), Gaps = 17/144 (11%)
 Frame = -2

Query: 383 IEASPEGFNMLRRMYETVQEPLMNATTMAANSGSQTRDI-XXXXXXXXXXXXXXXXAPNT 207
           IE+SPEGFNMLRRMYE VQEP +NATTMA N+G+    +                  PNT
Sbjct: 253 IESSPEGFNMLRRMYENVQEPFLNATTMAGNTGNDAAAVRNQSTNPSTTNSEATSPVPNT 312

Query: 206 NPLPNPWSNAGAAGVAQRNTARSTRAGG---TPAIGGLSGLGLPNMD------------- 75
           NPLPNPWS+ G  G  Q NT RST  GG    PA  GL GLGLP+++             
Sbjct: 313 NPLPNPWSSTGTGGGGQTNTRRSTTTGGDARQPAPTGLGGLGLPDLEGMMGGMPDTAMLT 372

Query: 74  QFVPTPAVAQRIRSLLSSPQAMNR 3
           Q +  PA++Q ++S+LS+PQ MN+
Sbjct: 373 QLMQNPAISQMMQSILSNPQTMNQ 396


>ref|XP_003517138.1| PREDICTED: ubiquilin-4-like [Glycine max]
          Length = 541

 Score =  117 bits (292), Expect = 1e-24
 Identities = 68/148 (45%), Positives = 85/148 (57%), Gaps = 21/148 (14%)
 Frame = -2

Query: 383 IEASPEGFNMLRRMYETVQEPLMNATTMAANSGSQTRDI-XXXXXXXXXXXXXXXXAPNT 207
           IE+SPEGFNMLRRMYE VQEP +NATTMA N+G+    +                  PNT
Sbjct: 252 IESSPEGFNMLRRMYENVQEPFLNATTMAGNTGNDAAAVRNQSTNPSTTNSEATSPVPNT 311

Query: 206 NPLPNPWSNAGAAGVAQRNTARSTRAGG-----TPAIGGLSGLGLPNMD----------- 75
           NPLPNPWS+ G  G  Q NT RST  GG     TP   GL GLGLP+++           
Sbjct: 312 NPLPNPWSSTGTGG-GQNNTRRSTTTGGEARQSTPT--GLGGLGLPDLEGMLGGTGMPDA 368

Query: 74  ----QFVPTPAVAQRIRSLLSSPQAMNR 3
               Q +  PA++Q ++S+LS+PQ MN+
Sbjct: 369 AMLTQLMQNPAISQMMQSILSNPQTMNQ 396


>ref|XP_002282473.2| PREDICTED: ubiquilin-1-like [Vitis vinifera]
          Length = 558

 Score =  114 bits (286), Expect = 6e-24
 Identities = 72/159 (45%), Positives = 86/159 (54%), Gaps = 32/159 (20%)
 Frame = -2

Query: 383 IEASPEGFNMLRRMYETVQEPLMNATTMAANS-----------------GSQTRDIXXXX 255
           IE+SPEGFNMLRRMYE VQEP +NATTM+ +S                 G+Q RD     
Sbjct: 256 IESSPEGFNMLRRMYENVQEPFLNATTMSGDSGNTLGSNPFAALLGNQGGAQARDGSNNP 315

Query: 254 XXXXXXXXXXXXAPNTNPLPNPWSNAGAAGVAQRNTARSTRAGG--TPAIGGLSGLGLPN 81
                       APNTNPLPNPWS   A G    NTARS  AG    P++ GL GLGLP 
Sbjct: 316 STTGAEATAGLTAPNTNPLPNPWS---AGGAQTNNTARSIPAGDARAPSVAGLGGLGLPE 372

Query: 80  MD-------------QFVPTPAVAQRIRSLLSSPQAMNR 3
           M+             Q +  PAV+Q ++SLLS+PQ MN+
Sbjct: 373 MERMLNGMPDATLFNQLLQNPAVSQMMQSLLSNPQYMNQ 411


>ref|XP_002521706.1| plant ubiquilin, putative [Ricinus communis]
           gi|223539097|gb|EEF40693.1| plant ubiquilin, putative
           [Ricinus communis]
          Length = 548

 Score =  112 bits (281), Expect = 2e-23
 Identities = 72/160 (45%), Positives = 85/160 (53%), Gaps = 33/160 (20%)
 Frame = -2

Query: 383 IEASPEGFNMLRRMYETVQEPLMNATTMAAN----------------SGSQTRDIXXXXX 252
           IE+SPEGFNMLRRMYETVQEP +NATTMA N                +G+Q  D      
Sbjct: 246 IESSPEGFNMLRRMYETVQEPFLNATTMAGNTGGDSANPFAALLGNQAGNQASDATTNPS 305

Query: 251 XXXXXXXXXXXAPNTNPLPNPWSNAGAAGVAQRNTARSTRAGG----TPAIGGLSGLGLP 84
                      APNTNPLPNPW+  G  G A  NTARS+  G     TP   GL GLGLP
Sbjct: 306 IASSESTTGSPAPNTNPLPNPWTATGTGG-ALNNTARSSNTGDARPQTPV--GLGGLGLP 362

Query: 83  NMD-------------QFVPTPAVAQRIRSLLSSPQAMNR 3
             D             Q +  PA++Q ++SLLS+PQ MN+
Sbjct: 363 EFDSMFGAMPDSNVMSQMLQNPAISQMMQSLLSNPQYMNQ 402


>ref|XP_002306425.1| predicted protein [Populus trichocarpa] gi|222855874|gb|EEE93421.1|
           predicted protein [Populus trichocarpa]
          Length = 549

 Score =  112 bits (280), Expect = 3e-23
 Identities = 71/158 (44%), Positives = 85/158 (53%), Gaps = 31/158 (19%)
 Frame = -2

Query: 383 IEASPEGFNMLRRMYETVQEPLMNATTMAAN----------------SGSQTRDIXXXXX 252
           IE+SPEGFNMLRRMYETVQEP +NATTMA N                +G+Q RD      
Sbjct: 250 IESSPEGFNMLRRMYETVQEPFLNATTMAGNAGGDSANPFAALLGTQTGNQARDGSTNLS 309

Query: 251 XXXXXXXXXXXAPNTNPLPNPWSNAGAAGVAQRNTARSTRAGGT--PAIGGLSGLGLPNM 78
                      APNTNPLPNPWS+ G    AQ NT RS     T   A  GL GLGLP++
Sbjct: 310 TTSSETTTGSPAPNTNPLPNPWSSGG----AQTNTTRSNPTSDTRPQAPTGLGGLGLPDL 365

Query: 77  D-------------QFVPTPAVAQRIRSLLSSPQAMNR 3
           D             Q +  PA++Q ++S +SSPQ MN+
Sbjct: 366 DNMFSAMPDAAMVSQLMQNPAISQMMQSFMSSPQYMNQ 403


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