BLASTX nr result

ID: Coptis23_contig00009403 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009403
         (1182 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30066.3| unnamed protein product [Vitis vinifera]              461   e-127
ref|XP_002274658.1| PREDICTED: peptide chain release factor 2-li...   461   e-127
emb|CAN74766.1| hypothetical protein VITISV_041859 [Vitis vinifera]   457   e-126
ref|XP_002308002.1| predicted protein [Populus trichocarpa] gi|2...   421   e-115
ref|XP_003535895.1| PREDICTED: peptide chain release factor 2-li...   409   e-112

>emb|CBI30066.3| unnamed protein product [Vitis vinifera]
          Length = 414

 Score =  461 bits (1186), Expect = e-127
 Identities = 238/357 (66%), Positives = 287/357 (80%), Gaps = 1/357 (0%)
 Frame = -1

Query: 1182 VILRAEMFGPQALELEESRQIKQEEMLHHYNLWDDVTKSSEMLTHLADTTKVVDNLKDLR 1003
            V+L+A+M  P ALELEE+ +I+QEEM+  YNLWDDVTKS+E+L  LAD++KVVD LKDL 
Sbjct: 59   VVLQADMLAPAALELEEASRIRQEEMIRKYNLWDDVTKSNEILGKLADSSKVVDTLKDLT 118

Query: 1002 YKAEEAKLITQLADMDAINYRLFKQAYTASVDVSKLLDHYELSKLLSGPYDADGACITIR 823
            YKAEEAKLITQL +MDAIN+ LF+QAY ASVDVSK L  YE+SKLL G +D +GAC+TI+
Sbjct: 119  YKAEEAKLITQLVEMDAINHGLFEQAYNASVDVSKFLYQYEMSKLLRGQFDMEGACLTIK 178

Query: 822  AGSEGICSEVWAERILSMYLKWAEKQGYKGRLVETYPSENGGVKSATLDFELEYAYGYLS 643
            AG  GI SE+WAE++LSMY KWAEKQGYKGR+VE Y S+NGG+KSAT++FE EY YGYLS
Sbjct: 179  AGPRGIYSEIWAEQLLSMYTKWAEKQGYKGRVVEKYASKNGGIKSATIEFESEYGYGYLS 238

Query: 642  GERGAHRKIKRSSDESILLEDRVAFVDVIPLFLQKDSDLQIDEEDLVISS-SLQDDDQSV 466
            GERG H  I+ S DESIL E   A VDVIPLFL+   DLQID+ DL ISS S    +Q  
Sbjct: 239  GERGVHHMIRSSDDESILHETGSAVVDVIPLFLETAPDLQIDDGDLRISSPSCHGVEQG- 297

Query: 465  CQSEPAISIRHIPTGISVESSGERSRFANKTKALNRLKAKLLVIAKEQGVSHVKNIKINA 286
             ++  A+ I+HIPTGISV+SSGERS FANK +ALNRLKAKL+V A EQG+  V  IK  A
Sbjct: 298  -RTGHAVCIQHIPTGISVQSSGERSHFANKMRALNRLKAKLVVTAMEQGIPEVGGIKREA 356

Query: 285  IVDVSRQESRKYIFHPHKLVQDVKTGIQLPDLNSVMDGNIEPLIGAHISSRLATGRV 115
            I D+ +QE+R+Y+FHP+KLVQDVKT IQLPDLNSV+DGNIEPLIGA+IS R A+  +
Sbjct: 357  IADMWKQETRRYVFHPNKLVQDVKTDIQLPDLNSVLDGNIEPLIGANISMRQASDMI 413


>ref|XP_002274658.1| PREDICTED: peptide chain release factor 2-like [Vitis vinifera]
          Length = 417

 Score =  461 bits (1186), Expect = e-127
 Identities = 238/357 (66%), Positives = 287/357 (80%), Gaps = 1/357 (0%)
 Frame = -1

Query: 1182 VILRAEMFGPQALELEESRQIKQEEMLHHYNLWDDVTKSSEMLTHLADTTKVVDNLKDLR 1003
            V+L+A+M  P ALELEE+ +I+QEEM+  YNLWDDVTKS+E+L  LAD++KVVD LKDL 
Sbjct: 62   VVLQADMLAPAALELEEASRIRQEEMIRKYNLWDDVTKSNEILGKLADSSKVVDTLKDLT 121

Query: 1002 YKAEEAKLITQLADMDAINYRLFKQAYTASVDVSKLLDHYELSKLLSGPYDADGACITIR 823
            YKAEEAKLITQL +MDAIN+ LF+QAY ASVDVSK L  YE+SKLL G +D +GAC+TI+
Sbjct: 122  YKAEEAKLITQLVEMDAINHGLFEQAYNASVDVSKFLYQYEMSKLLRGQFDMEGACLTIK 181

Query: 822  AGSEGICSEVWAERILSMYLKWAEKQGYKGRLVETYPSENGGVKSATLDFELEYAYGYLS 643
            AG  GI SE+WAE++LSMY KWAEKQGYKGR+VE Y S+NGG+KSAT++FE EY YGYLS
Sbjct: 182  AGPRGIYSEIWAEQLLSMYTKWAEKQGYKGRVVEKYASKNGGIKSATIEFESEYGYGYLS 241

Query: 642  GERGAHRKIKRSSDESILLEDRVAFVDVIPLFLQKDSDLQIDEEDLVISS-SLQDDDQSV 466
            GERG H  I+ S DESIL E   A VDVIPLFL+   DLQID+ DL ISS S    +Q  
Sbjct: 242  GERGVHHMIRSSDDESILHETGSAVVDVIPLFLETAPDLQIDDGDLRISSPSCHGVEQG- 300

Query: 465  CQSEPAISIRHIPTGISVESSGERSRFANKTKALNRLKAKLLVIAKEQGVSHVKNIKINA 286
             ++  A+ I+HIPTGISV+SSGERS FANK +ALNRLKAKL+V A EQG+  V  IK  A
Sbjct: 301  -RTGHAVCIQHIPTGISVQSSGERSHFANKMRALNRLKAKLVVTAMEQGIPEVGGIKREA 359

Query: 285  IVDVSRQESRKYIFHPHKLVQDVKTGIQLPDLNSVMDGNIEPLIGAHISSRLATGRV 115
            I D+ +QE+R+Y+FHP+KLVQDVKT IQLPDLNSV+DGNIEPLIGA+IS R A+  +
Sbjct: 360  IADMWKQETRRYVFHPNKLVQDVKTDIQLPDLNSVLDGNIEPLIGANISMRQASDMI 416


>emb|CAN74766.1| hypothetical protein VITISV_041859 [Vitis vinifera]
          Length = 450

 Score =  457 bits (1175), Expect = e-126
 Identities = 238/355 (67%), Positives = 286/355 (80%), Gaps = 2/355 (0%)
 Frame = -1

Query: 1182 VILRAEMFGPQALELEESRQIKQEEMLHHYNLWDDVTKSSEMLTHLADTTKVVDNLKDLR 1003
            V+L+A+M  P ALELEE+ +I+QEEM+  YNLWDDVTKS+E+L  LAD++KVVD LKDL 
Sbjct: 94   VVLQADMLAPAALELEEASRIRQEEMIRKYNLWDDVTKSNEILGKLADSSKVVDTLKDLT 153

Query: 1002 YKAEEAKLITQLADMDAINYRLFKQAYTASVDVSKLLDHYELSKLLSGPYDADGACITIR 823
            YKAEEAKLITQL +MDAIN+ LF+QAY ASVDVSK L  YE+SKLL G +D +GAC+TI+
Sbjct: 154  YKAEEAKLITQLVEMDAINHGLFEQAYNASVDVSKFLYQYEMSKLLRGQFDMEGACLTIK 213

Query: 822  AGSEGICSEVWAERILSMYLKWAEKQGYKGRLVETYPSENGGVKSATLDFELEYAYGYLS 643
            AG  GI SE+WAE++LSMY KWAEKQGYKGR+VE Y S+NGG+KSAT++FE EY YGYLS
Sbjct: 214  AGPRGIYSEIWAEQLLSMYTKWAEKQGYKGRVVEKYASKNGGIKSATIEFESEYGYGYLS 273

Query: 642  GERGAHRKIKRSSDESILLEDR-VAFVDVIPLFLQKDSDLQIDEEDLVISS-SLQDDDQS 469
            GERG H  I+ S DESIL E    A VDVIPLFL+   DLQID+ DL ISS S    +Q 
Sbjct: 274  GERGVHHMIRSSDDESILHEQTGSAVVDVIPLFLETAPDLQIDDGDLRISSPSCHGVEQG 333

Query: 468  VCQSEPAISIRHIPTGISVESSGERSRFANKTKALNRLKAKLLVIAKEQGVSHVKNIKIN 289
              ++  A+ I+HIPTGISV+SSGERS FANK +ALNRLKAKL+V A EQG+  V  IK  
Sbjct: 334  --RTGHAVCIQHIPTGISVQSSGERSHFANKMRALNRLKAKLVVTAMEQGIPEVGGIKRE 391

Query: 288  AIVDVSRQESRKYIFHPHKLVQDVKTGIQLPDLNSVMDGNIEPLIGAHISSRLAT 124
            AI D+ +QE+R+Y+FHP+KLVQDVKT IQLPDLNSV+DGNIEPLIGA+IS R A+
Sbjct: 392  AIADMWKQETRRYVFHPNKLVQDVKTDIQLPDLNSVLDGNIEPLIGANISMRQAS 446


>ref|XP_002308002.1| predicted protein [Populus trichocarpa] gi|222853978|gb|EEE91525.1|
            predicted protein [Populus trichocarpa]
          Length = 374

 Score =  421 bits (1083), Expect = e-115
 Identities = 214/349 (61%), Positives = 271/349 (77%)
 Frame = -1

Query: 1179 ILRAEMFGPQALELEESRQIKQEEMLHHYNLWDDVTKSSEMLTHLADTTKVVDNLKDLRY 1000
            +LRAEM  P ALE EE+R+IKQEEM+H  NLW+D  KS+E+L  LA + K +D LKDL+Y
Sbjct: 24   VLRAEMLAPTALEHEEARRIKQEEMIHECNLWEDPAKSNEILIKLAGSAKAIDALKDLKY 83

Query: 999  KAEEAKLITQLADMDAINYRLFKQAYTASVDVSKLLDHYELSKLLSGPYDADGACITIRA 820
            KAEEAKLI+QL +M+AINY+LFKQAYTAS+DV KLLD YE+S+LL GPYD  GAC+ IRA
Sbjct: 84   KAEEAKLISQLVEMEAINYQLFKQAYTASLDVRKLLDQYEMSRLLKGPYDKQGACVVIRA 143

Query: 819  GSEGICSEVWAERILSMYLKWAEKQGYKGRLVETYPSENGGVKSATLDFELEYAYGYLSG 640
            GS+G+  E+W E +L+MY+KWAEK GYKGRLVE + S +GG++SAT++FE E AYGYLSG
Sbjct: 144  GSKGLNHEIWKEELLNMYVKWAEKLGYKGRLVEKHTSMHGGIESATIEFEFECAYGYLSG 203

Query: 639  ERGAHRKIKRSSDESILLEDRVAFVDVIPLFLQKDSDLQIDEEDLVISSSLQDDDQSVCQ 460
            ERG H KI  S + S+  E   A VDV+PLFL    D QID+E+L++S S         +
Sbjct: 204  ERGIHHKI-NSQNGSVHHEVTTACVDVVPLFLGTGFDFQIDDEELIVSCSPSLLRDRKSR 262

Query: 459  SEPAISIRHIPTGISVESSGERSRFANKTKALNRLKAKLLVIAKEQGVSHVKNIKINAIV 280
            +E  + ++HIPTGISV+SSGERS FANK KA NRLKAKLLVIA+EQ V  V +I+   IV
Sbjct: 263  TELTVCLQHIPTGISVQSSGERSHFANKVKAHNRLKAKLLVIAEEQKVCDVSSIRRADIV 322

Query: 279  DVSRQESRKYIFHPHKLVQDVKTGIQLPDLNSVMDGNIEPLIGAHISSR 133
            D  ++E+R+Y+  P+KLVQDV+TGI+LPDLNS++DGNI  LIGAHI+ R
Sbjct: 323  DEWQKETRRYVSQPYKLVQDVRTGIELPDLNSILDGNINTLIGAHINIR 371


>ref|XP_003535895.1| PREDICTED: peptide chain release factor 2-like [Glycine max]
          Length = 427

 Score =  409 bits (1050), Expect = e-112
 Identities = 203/350 (58%), Positives = 276/350 (78%)
 Frame = -1

Query: 1179 ILRAEMFGPQALELEESRQIKQEEMLHHYNLWDDVTKSSEMLTHLADTTKVVDNLKDLRY 1000
            +LRAEMF   ALE+EE+  IKQEEM+  +++WDD  KS+++L  LA++ KVVD+LKDL+Y
Sbjct: 77   VLRAEMFASTALEMEEATWIKQEEMVRDFDMWDDPAKSNDILVKLANSAKVVDSLKDLKY 136

Query: 999  KAEEAKLITQLADMDAINYRLFKQAYTASVDVSKLLDHYELSKLLSGPYDADGACITIRA 820
            K EEAKLI QLA+++AI+Y L+KQAY  S+DVS+++D YE+SKLL GP+D  GAC+ I+A
Sbjct: 137  KVEEAKLINQLAEINAIDYGLYKQAYETSLDVSEIVDLYEISKLLKGPFDMAGACLVIKA 196

Query: 819  GSEGICSEVWAERILSMYLKWAEKQGYKGRLVETYPSENGGVKSATLDFELEYAYGYLSG 640
            G +G+  ++WAE+ILSMYL+WA++QGY+GR+V+    +NGG+ SA ++FE E AYGYLSG
Sbjct: 197  GPKGMYPKLWAEQILSMYLRWAKRQGYEGRIVDKCLYKNGGINSAIIEFEFECAYGYLSG 256

Query: 639  ERGAHRKIKRSSDESILLEDRVAFVDVIPLFLQKDSDLQIDEEDLVISSSLQDDDQSVCQ 460
            E+G H  I+ S +ES  LE   A VDVIP+FL+   DL+ID EDL+ISS L    ++  Q
Sbjct: 257  EKGVHYLIRGSPNESSQLEASSATVDVIPMFLESACDLEIDSEDLIISSPL-IHGKNKRQ 315

Query: 459  SEPAISIRHIPTGISVESSGERSRFANKTKALNRLKAKLLVIAKEQGVSHVKNIKINAIV 280
            ++  + I+HIPTGISV+S GERS FANK KALNRLKAKLLV  KEQGV+ +K+I+   IV
Sbjct: 316  TDHTVCIQHIPTGISVQSYGERSHFANKMKALNRLKAKLLVTTKEQGVASIKSIQKENIV 375

Query: 279  DVSRQESRKYIFHPHKLVQDVKTGIQLPDLNSVMDGNIEPLIGAHISSRL 130
            ++ ++E R+Y+ HPHKLV DVKTG+++PDLN V++GNI PLI AHI+SR+
Sbjct: 376  NLWQEEIRRYVSHPHKLVHDVKTGVEVPDLNYVLEGNIGPLIAAHINSRV 425


Top