BLASTX nr result

ID: Coptis23_contig00009400 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009400
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003560910.1| PREDICTED: LOW QUALITY PROTEIN: 26.2 kDa hea...    88   8e-16
gb|AFV46381.1| ACD-ScHsp26-like protein [Tamarix hispida]              85   7e-15
ref|XP_002454239.1| hypothetical protein SORBIDRAFT_04g027330 [S...    84   1e-14
ref|NP_001057162.1| Os06g0219500 [Oryza sativa Japonica Group] g...    83   3e-14
gb|EAZ36293.1| hypothetical protein OsJ_20614 [Oryza sativa Japo...    83   3e-14

>ref|XP_003560910.1| PREDICTED: LOW QUALITY PROTEIN: 26.2 kDa heat shock protein,
           mitochondrial-like [Brachypodium distachyon]
          Length = 250

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 45/84 (53%), Positives = 59/84 (70%), Gaps = 7/84 (8%)
 Frame = -2

Query: 308 GLGKEHVKVTVEEDLLIIKGEADTEAGSGNN-------YSTKFVIGKDRFKVDKIQAEMK 150
           GLGKEHVKV  E+D L+IKGE +   G G++       YS +  +  D FK+D+I+AEMK
Sbjct: 166 GLGKEHVKVWAEQDCLVIKGEGEKXPGEGDDGDAWVPRYSRRIEVATDAFKMDQIKAEMK 225

Query: 149 NGVLNVTVPKLKYEERKNVVQVTV 78
           NGVL VT+P++K EERK+V QV V
Sbjct: 226 NGVLWVTIPRVKEEERKDVFQVKV 249


>gb|AFV46381.1| ACD-ScHsp26-like protein [Tamarix hispida]
          Length = 127

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 45/80 (56%), Positives = 57/80 (71%), Gaps = 3/80 (3%)
 Frame = -2

Query: 308 GLGKEHVKVTVEEDLLIIKGEADTEAG---SGNNYSTKFVIGKDRFKVDKIQAEMKNGVL 138
           GLGKEHVKV+VEE+ L+IKG+ + E     S   YST+  +  + FK D I+AEMKNGVL
Sbjct: 47  GLGKEHVKVSVEENTLVIKGQGEKETEEEESRRRYSTRVDLTPNLFKTDGIKAEMKNGVL 106

Query: 137 NVTVPKLKYEERKNVVQVTV 78
            V VPK+K EERK+V QV +
Sbjct: 107 KVVVPKVKEEERKDVFQVQI 126


>ref|XP_002454239.1| hypothetical protein SORBIDRAFT_04g027330 [Sorghum bicolor]
           gi|241934070|gb|EES07215.1| hypothetical protein
           SORBIDRAFT_04g027330 [Sorghum bicolor]
          Length = 220

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 43/82 (52%), Positives = 58/82 (70%), Gaps = 5/82 (6%)
 Frame = -2

Query: 308 GLGKEHVKVTVEEDLLIIKGEADTEAGSGNN-----YSTKFVIGKDRFKVDKIQAEMKNG 144
           GLGKEHVKV  E++ L+IKGE + E+G   +     YS +  +  + +K+DKI+AEMKNG
Sbjct: 138 GLGKEHVKVWAEQNSLVIKGEGEKESGEDEDVPPPRYSGRIELAPEVYKMDKIKAEMKNG 197

Query: 143 VLNVTVPKLKYEERKNVVQVTV 78
           VL V VPK+K E+RK+V QV V
Sbjct: 198 VLKVVVPKVKEEQRKDVFQVNV 219


>ref|NP_001057162.1| Os06g0219500 [Oryza sativa Japonica Group]
           gi|75289212|sp|Q67X83.1|HS26M_ORYSJ RecName: Full=26.2
           kDa heat shock protein, mitochondrial; Short=OsHsp26.2;
           Flags: Precursor gi|51535365|dbj|BAD37236.1| putative
           heat shock protein hsp22 precursor [Oryza sativa
           Japonica Group] gi|113595202|dbj|BAF19076.1|
           Os06g0219500 [Oryza sativa Japonica Group]
          Length = 248

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 44/82 (53%), Positives = 56/82 (68%), Gaps = 5/82 (6%)
 Frame = -2

Query: 308 GLGKEHVKVTVEEDLLIIKGEADTEA-----GSGNNYSTKFVIGKDRFKVDKIQAEMKNG 144
           GLGKEHVKV  E++ L+IKGE + +       +   Y+ +  +  D FK+DKI+AEMKNG
Sbjct: 166 GLGKEHVKVWAEQNSLVIKGEGEKDPEDDADAAPPRYTRRIELPADAFKMDKIKAEMKNG 225

Query: 143 VLNVTVPKLKYEERKNVVQVTV 78
           VL V VPKLK EERK+V QV V
Sbjct: 226 VLRVAVPKLKEEERKDVFQVNV 247


>gb|EAZ36293.1| hypothetical protein OsJ_20614 [Oryza sativa Japonica Group]
          Length = 147

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 44/82 (53%), Positives = 56/82 (68%), Gaps = 5/82 (6%)
 Frame = -2

Query: 308 GLGKEHVKVTVEEDLLIIKGEADTEA-----GSGNNYSTKFVIGKDRFKVDKIQAEMKNG 144
           GLGKEHVKV  E++ L+IKGE + +       +   Y+ +  +  D FK+DKI+AEMKNG
Sbjct: 65  GLGKEHVKVWAEQNSLVIKGEGEKDPEDDADAAPPRYTRRIELPADAFKMDKIKAEMKNG 124

Query: 143 VLNVTVPKLKYEERKNVVQVTV 78
           VL V VPKLK EERK+V QV V
Sbjct: 125 VLRVAVPKLKEEERKDVFQVNV 146


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