BLASTX nr result

ID: Coptis23_contig00009380 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009380
         (1005 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518017.1| Vesicle transport protein SFT2B, putative [R...   246   5e-63
ref|XP_002270756.1| PREDICTED: vesicle transport protein SFT2B [...   238   1e-60
ref|XP_004147336.1| PREDICTED: vesicle transport protein SFT2B-l...   236   8e-60
ref|XP_003548262.1| PREDICTED: vesicle transport protein SFT2B [...   236   8e-60
ref|XP_002305352.1| predicted protein [Populus trichocarpa] gi|2...   235   1e-59

>ref|XP_002518017.1| Vesicle transport protein SFT2B, putative [Ricinus communis]
           gi|223542999|gb|EEF44535.1| Vesicle transport protein
           SFT2B, putative [Ricinus communis]
          Length = 174

 Score =  246 bits (629), Expect = 5e-63
 Identities = 124/173 (71%), Positives = 139/173 (80%), Gaps = 2/173 (1%)
 Frame = +2

Query: 98  MERMNQAMEKMKILVG--IXXXXXXXXXXXSSFMDEFNRNCTLSTTQRLYGFAICLMAGL 271
           ME+M +AMEKMK+LVG  +           +SF+D+FNRNCTLST QRLYGFAIC  +GL
Sbjct: 1   MEKMKEAMEKMKMLVGLEVEDEEPAAAEESASFLDDFNRNCTLSTKQRLYGFAICFFSGL 60

Query: 272 ACTLLSMLVFFNPIKFGITFTFGNLLSLGSTAFLIGPKRQLTMMLDPVRIYATATYXXXX 451
           ACTLLSMLVFFNP+KFGITFTFGNLLSLGSTAFLIGPKRQ+TMMLDPVRIYATA +    
Sbjct: 61  ACTLLSMLVFFNPVKFGITFTFGNLLSLGSTAFLIGPKRQVTMMLDPVRIYATALFLASI 120

Query: 452 XXXXXXXXXVHNKLLTLVAIVLEFSALIWYSLSYIPFARSMVSKIMTTCFDSE 610
                    VHNKLLTL+AIVLEF AL+WYSLSYIPFARSMVSK+M  CFD+E
Sbjct: 121 IIALFCALYVHNKLLTLLAIVLEFGALVWYSLSYIPFARSMVSKVMLACFDTE 173


>ref|XP_002270756.1| PREDICTED: vesicle transport protein SFT2B [Vitis vinifera]
           gi|296084822|emb|CBI27704.3| unnamed protein product
           [Vitis vinifera]
          Length = 177

 Score =  238 bits (608), Expect = 1e-60
 Identities = 124/176 (70%), Positives = 136/176 (77%), Gaps = 5/176 (2%)
 Frame = +2

Query: 98  MERMNQAMEKMKILVGIXXXXXXXXXXXS-----SFMDEFNRNCTLSTTQRLYGFAICLM 262
           ME+MN A E++KILVG+                 SFMD+FNR+CTLST QR YGFAICL 
Sbjct: 1   MEKMNHAFERVKILVGMEVDDDQNVAAPPDDGPFSFMDDFNRDCTLSTKQRFYGFAICLA 60

Query: 263 AGLACTLLSMLVFFNPIKFGITFTFGNLLSLGSTAFLIGPKRQLTMMLDPVRIYATATYX 442
           AGL CTLLSMLVFFNPIKFGITFTFGNLL+LGSTAFLIGPKRQ+TMMLDPVRIYATA Y 
Sbjct: 61  AGLTCTLLSMLVFFNPIKFGITFTFGNLLALGSTAFLIGPKRQVTMMLDPVRIYATAIYL 120

Query: 443 XXXXXXXXXXXXVHNKLLTLVAIVLEFSALIWYSLSYIPFARSMVSKIMTTCFDSE 610
                       V NKLLTL+AI+LEF ALIWYSLSYIPFARSMVSKIM +CFD+E
Sbjct: 121 ASIIIALFCALYVRNKLLTLLAIMLEFGALIWYSLSYIPFARSMVSKIMVSCFDTE 176


>ref|XP_004147336.1| PREDICTED: vesicle transport protein SFT2B-like [Cucumis sativus]
           gi|449508719|ref|XP_004163391.1| PREDICTED: vesicle
           transport protein SFT2B-like [Cucumis sativus]
          Length = 179

 Score =  236 bits (601), Expect = 8e-60
 Identities = 119/178 (66%), Positives = 135/178 (75%), Gaps = 7/178 (3%)
 Frame = +2

Query: 98  MERMNQAMEKMKILVGIXXXXXXXXXXX-------SSFMDEFNRNCTLSTTQRLYGFAIC 256
           ME+MNQA EKMK+LVG+                  S FMD+FNRNCTLST QR YGFAIC
Sbjct: 1   MEKMNQAFEKMKMLVGVEVDDEREASTATIDDGSSSWFMDDFNRNCTLSTKQRFYGFAIC 60

Query: 257 LMAGLACTLLSMLVFFNPIKFGITFTFGNLLSLGSTAFLIGPKRQLTMMLDPVRIYATAT 436
            +AG+ CTL+SMLVFFNPIKFGI FT GN+LSLGSTAFLIGPKRQ+TMMLDPVRIYATA 
Sbjct: 61  FVAGVTCTLMSMLVFFNPIKFGIAFTLGNMLSLGSTAFLIGPKRQVTMMLDPVRIYATAI 120

Query: 437 YXXXXXXXXXXXXXVHNKLLTLVAIVLEFSALIWYSLSYIPFARSMVSKIMTTCFDSE 610
           Y             VHNKLLTL++++LEF ALIWYSLSYIPFARSMVSK+M +C D+E
Sbjct: 121 YLASMIFALFGALYVHNKLLTLLSLILEFGALIWYSLSYIPFARSMVSKVMVSCLDTE 178


>ref|XP_003548262.1| PREDICTED: vesicle transport protein SFT2B [Glycine max]
           gi|255629641|gb|ACU15168.1| unknown [Glycine max]
          Length = 178

 Score =  236 bits (601), Expect = 8e-60
 Identities = 121/177 (68%), Positives = 134/177 (75%), Gaps = 6/177 (3%)
 Frame = +2

Query: 98  MERMNQAMEKMKILVGIXXXXXXXXXXXSS------FMDEFNRNCTLSTTQRLYGFAICL 259
           ME+MN+A EK+KI+VG+            +      FMD+FNRNCTLSTTQRLYGFAIC 
Sbjct: 1   MEKMNKAFEKVKIMVGMDAEDEDQQAAALNSSNSFAFMDDFNRNCTLSTTQRLYGFAICF 60

Query: 260 MAGLACTLLSMLVFFNPIKFGITFTFGNLLSLGSTAFLIGPKRQLTMMLDPVRIYATATY 439
            AGL CTLLSMLVFF PIKF I FT GNLLSLGSTAFLIGPKRQ+TMMLDPVRIYATA Y
Sbjct: 61  AAGLTCTLLSMLVFFKPIKFAIAFTLGNLLSLGSTAFLIGPKRQVTMMLDPVRIYATAIY 120

Query: 440 XXXXXXXXXXXXXVHNKLLTLVAIVLEFSALIWYSLSYIPFARSMVSKIMTTCFDSE 610
                        VHNKLLT +AI+LEF AL+WYSLSYIPFARSMVSKIM +CFD+E
Sbjct: 121 IASMIIALFCALYVHNKLLTFLAIILEFGALVWYSLSYIPFARSMVSKIMVSCFDTE 177


>ref|XP_002305352.1| predicted protein [Populus trichocarpa] gi|222848316|gb|EEE85863.1|
           predicted protein [Populus trichocarpa]
          Length = 177

 Score =  235 bits (600), Expect = 1e-59
 Identities = 120/176 (68%), Positives = 135/176 (76%), Gaps = 5/176 (2%)
 Frame = +2

Query: 98  MERMNQAMEKMKILVGIXXXXXXXXXXXS-----SFMDEFNRNCTLSTTQRLYGFAICLM 262
           M++MNQA EK+K+LVG+                 +FMD+FNR+CTLST QR YGFAIC  
Sbjct: 1   MQKMNQAFEKVKMLVGMEVEDEEEGVATVESSSFTFMDDFNRDCTLSTKQRFYGFAICFS 60

Query: 263 AGLACTLLSMLVFFNPIKFGITFTFGNLLSLGSTAFLIGPKRQLTMMLDPVRIYATATYX 442
            GLAC LLSMLVFFNP+KFGITFTFGNLLSLGSTAFLIGPKRQ++MMLDPVRIYATA Y 
Sbjct: 61  TGLACVLLSMLVFFNPVKFGITFTFGNLLSLGSTAFLIGPKRQVSMMLDPVRIYATALYL 120

Query: 443 XXXXXXXXXXXXVHNKLLTLVAIVLEFSALIWYSLSYIPFARSMVSKIMTTCFDSE 610
                       VHNKLLTL+AI+LEF ALIWYSLSYIPFAR+MVSKIM  CFD+E
Sbjct: 121 ASIIIALLCALYVHNKLLTLLAIILEFGALIWYSLSYIPFARAMVSKIMLACFDTE 176


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