BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009369
         (940 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280664.2| PREDICTED: ATP-dependent DNA helicase recG-l...   254   3e-65
emb|CBI26906.3| unnamed protein product [Vitis vinifera]              240   4e-61
ref|XP_002526020.1| conserved hypothetical protein [Ricinus comm...   176   7e-42
ref|XP_002314808.1| predicted protein [Populus trichocarpa] gi|2...   139   1e-30
ref|NP_178253.3| ATP-dependent DNA helicase RecG [Arabidopsis th...   134   2e-29

>ref|XP_002280664.2| PREDICTED: ATP-dependent DNA helicase recG-like [Vitis vinifera]
          Length = 1036

 Score =  254 bits (648), Expect = 3e-65
 Identities = 148/317 (46%), Positives = 195/317 (61%), Gaps = 5/317 (1%)
 Frame = +3

Query: 3   EKNLKSAISFEVEKGYLNAVGRNMRFSTFXXXXXXXXXXXXXXXCAHKLLEEVNGYGKAS 182
           EK L+ AI+FE E+GY NA+GR MRFS F                  KLL+EV+ YGKAS
Sbjct: 48  EKPLRIAIAFEAERGYQNALGRKMRFSNFLLSKISKLCSRSKHKFPEKLLDEVDSYGKAS 107

Query: 183 VLDRSKLLNKVSVLLGYKSVQDLVENESGQKLSGANFKDILNELEVSLACERFSSIIMGS 362
           + DRSKLLNKVSVL+GY S+ DL+ENE  QK S  N KD +N +++SLAC +F SII+G+
Sbjct: 108 ISDRSKLLNKVSVLMGYDSLHDLIENERVQKESDMNLKDEINNVDISLACRKFPSIILGN 167

Query: 363 SSPILLFDELACKSEGRNHMIDQNCHICLPSSIGGEMFD-VERMTE--PSLDFPVAVDSS 533
           S P+ L+DE  C S+ R+ +  Q C   L SS G E +D  +R +E  PSL         
Sbjct: 168 SPPVELYDENKCHSDVRSLLAAQICEEFLSSS-GAEKWDGPDRFSETWPSL--------- 217

Query: 534 LLKELDSPVVEDL--CLLEEKSSDVLPIALQSVPLQTERKPVSYDIAEKPTFTLPSESEQ 707
                  P + ++   LL ++SS  LP++ Q + ++T+ K       E P   +  ES+ 
Sbjct: 218 ------CPTLPNINASLLRKESSSTLPVSSQPLTMETKEKSDVLVTVEGPPANMVLESQN 271

Query: 708 KIISIELILDKPLSSIPGISSKQCHQLEKCDIHTLRQLLHHFPRTYADLQNAHGEIVDGN 887
               +ELILDK +S IPG+  + C QLE C  HTLR+LL HFPRTYADL+NA   I DG 
Sbjct: 272 NAEPVELILDKSISFIPGLQKRHCRQLENCGFHTLRKLLQHFPRTYADLKNALIGIDDGQ 331

Query: 888 YMISFGRILSSRGIRAS 938
           YMIS G+ILSSRG++AS
Sbjct: 332 YMISIGKILSSRGVKAS 348


>emb|CBI26906.3| unnamed protein product [Vitis vinifera]
          Length = 988

 Score =  240 bits (612), Expect = 4e-61
 Identities = 147/313 (46%), Positives = 186/313 (59%), Gaps = 1/313 (0%)
 Frame = +3

Query: 3   EKNLKSAISFEVEKGYLNAVGRNMRFSTFXXXXXXXXXXXXXXXCAHKLLEEVNGYGKAS 182
           EK L+ AI+FE E+GY NA+GR MRFS F                  KLL+EV+ YGKAS
Sbjct: 17  EKPLRIAIAFEAERGYQNALGRKMRFSNFLLSKISKLCSRSKHKFPEKLLDEVDSYGKAS 76

Query: 183 VLDRSKLLNKVSVLLGYKSVQDLVENESGQKLSGANFKDILNELEVSLACERFSSIIMGS 362
           + DRSKLLNKVSVL+GY S+ DL+ENE  QK S  N KD +N +++SLAC +F SII+G+
Sbjct: 77  ISDRSKLLNKVSVLMGYDSLHDLIENERVQKESDMNLKDEINNVDISLACRKFPSIILGN 136

Query: 363 SSPILLFDELACKSEGRNHMIDQNCHICLPSSIGGEMFD-VERMTEPSLDFPVAVDSSLL 539
           S P+ L+DE  C S+ R+ +  Q C   L SS G E +D  +R +E    +P     SL 
Sbjct: 137 SPPVELYDENKCHSDVRSLLAAQICEEFLSSS-GAEKWDGPDRFSE---TWP-----SLC 187

Query: 540 KELDSPVVEDLCLLEEKSSDVLPIALQSVPLQTERKPVSYDIAEKPTFTLPSESEQKIIS 719
             L  P +    L +EK SDVL                     E P   +  ES+     
Sbjct: 188 PTL--PNINASLLRKEKKSDVLV------------------TVEGPPANMVLESQNNAEP 227

Query: 720 IELILDKPLSSIPGISSKQCHQLEKCDIHTLRQLLHHFPRTYADLQNAHGEIVDGNYMIS 899
           +ELILDK +S IPG+  + C QLE C  HTLR+LL HFPRTYADL+NA   I DG YMIS
Sbjct: 228 VELILDKSISFIPGLQKRHCRQLENCGFHTLRKLLQHFPRTYADLKNALIGIDDGQYMIS 287

Query: 900 FGRILSSRGIRAS 938
            G+ILSSRG++AS
Sbjct: 288 IGKILSSRGVKAS 300


>ref|XP_002526020.1| conserved hypothetical protein [Ricinus communis]
           gi|223534667|gb|EEF36360.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 983

 Score =  176 bits (446), Expect = 7e-42
 Identities = 110/281 (39%), Positives = 156/281 (55%), Gaps = 14/281 (4%)
 Frame = +3

Query: 138 AHKLLEEVNGYGKASVLDRSKLLNKVSVLLGYKSVQDLVENESGQKLSGANFKDILNELE 317
           A KLL++   Y   SV DRSKLLNKV+ L+ Y    DL+EN    + SG + KD  ++ +
Sbjct: 22  AEKLLDQAYKYDMPSVSDRSKLLNKVTALVDYDGFHDLIENGKAGEQSGQDLKDATDDFD 81

Query: 318 VSLACERFSSIIMGSSSPILLFDELACKSEGRNHMIDQNCHICLPSSIGGEMFDVERMTE 497
           VSLAC+RF SI +GSS P+ L+DE     E +  +  ++    +  ++G +  D +   E
Sbjct: 82  VSLACKRFPSITLGSSPPVELYDETTKPLEMKTLLAAESYKEFVSDALGMKWVDSDGFYE 141

Query: 498 --------PSLDFPVAV---DSSLLKELDSPVVEDLCLLEEKSSDVLPIALQSVPLQTER 644
                   PS ++ +     D S     +S   +   L E K   V  +++ S  +  E 
Sbjct: 142 QWTSADAVPSENYSIPKAEKDESACMTTESREEKTYLLEELKEESVNSLSVHSEDVTAET 201

Query: 645 KPVSYDIAEKPTFTLPSESEQKI---ISIELILDKPLSSIPGISSKQCHQLEKCDIHTLR 815
           K    +I     F++   S +K+   +     LD P+S IPG+S +Q HQLE C  HTLR
Sbjct: 202 KEKIDNI-----FSMQETSNKKVGESLLSAAFLDTPVSCIPGLSKRQHHQLENCGFHTLR 256

Query: 816 QLLHHFPRTYADLQNAHGEIVDGNYMISFGRILSSRGIRAS 938
           +LLHHFPRTYADLQNA   + DG Y+IS G+ILSSRG+RAS
Sbjct: 257 KLLHHFPRTYADLQNALVGVDDGQYLISVGKILSSRGVRAS 297


>ref|XP_002314808.1| predicted protein [Populus trichocarpa] gi|222863848|gb|EEF00979.1|
           predicted protein [Populus trichocarpa]
          Length = 888

 Score =  139 bits (350), Expect = 1e-30
 Identities = 89/238 (37%), Positives = 130/238 (54%)
 Frame = +3

Query: 225 LGYKSVQDLVENESGQKLSGANFKDILNELEVSLACERFSSIIMGSSSPILLFDELACKS 404
           + Y    DL+ENE+  K    N KD  ++ +VSLAC+RF SI++GSS P+ L+DE    S
Sbjct: 1   MDYDGFHDLIENETAAKQFRGNAKDDTDDFDVSLACKRFPSIVLGSSPPVELYDE----S 56

Query: 405 EGRNHMIDQNCHICLPSSIGGEMFDVERMTEPSLDFPVAVDSSLLKELDSPVVEDLCLLE 584
           E  + +  +     LP+++G +  D + + E               +L SP  E++    
Sbjct: 57  EINSLLAAKILEGFLPNAMGVKCVDPDTLHE---------------QLTSPHTENVN--- 98

Query: 585 EKSSDVLPIALQSVPLQTERKPVSYDIAEKPTFTLPSESEQKIISIELILDKPLSSIPGI 764
                       S+P +   K VS    E+ T  +  ES+  +      LDKP+S +PG+
Sbjct: 99  -----------SSMPKELREKIVSKIGMEEYTTKVELESQVNLA----YLDKPISCLPGL 143

Query: 765 SSKQCHQLEKCDIHTLRQLLHHFPRTYADLQNAHGEIVDGNYMISFGRILSSRGIRAS 938
           S++Q  QLE C  +TLR+LL HFPRTYADLQNAH  I DG Y+IS G++ SSR ++AS
Sbjct: 144 STRQRRQLENCGFYTLRKLLQHFPRTYADLQNAHFGIDDGQYLISVGKVTSSRAVKAS 201


>ref|NP_178253.3| ATP-dependent DNA helicase RecG [Arabidopsis thaliana]
           gi|330250357|gb|AEC05451.1| ATP-dependent DNA helicase
           RecG [Arabidopsis thaliana]
          Length = 973

 Score =  134 bits (338), Expect = 2e-29
 Identities = 95/314 (30%), Positives = 153/314 (48%), Gaps = 3/314 (0%)
 Frame = +3

Query: 6   KNLKSAISFEVEKGYLNAVGRNMRFSTFXXXXXXXXXXXXXXXCAHKLLEEVNGYGKASV 185
           + L+S I  + ++G  N +    R S F                +  LLE+V  Y  A +
Sbjct: 16  RRLRSVIVIQAQRGNWNRI----RLSNFFFSKVWNISYRSKHKYSDNLLEQVEKYASARL 71

Query: 186 LDRSKLLNKVSVLLGYKSVQDLVENESGQKLSGANFKDILNELEVSLACERFSSIIMGSS 365
            ++SKL+ KV+ L+   +V D ++ +S +++     KD++      LAC+RF SII+G S
Sbjct: 72  ENQSKLITKVAALMECDNVDDFIDKKSDEQVK----KDLV------LACKRFPSIILGDS 121

Query: 366 SPILLFDELACKSEGRNHMIDQNCHICLPSSIGGEMFDVERMTEPSLDFPVAVDSSLLKE 545
            P+ L+       E  + +     +  LP+ + G  FD + ++           SS   E
Sbjct: 122 RPVELYSNSKSYGESSSILKTPTDNSFLPTPMHGGWFDPDNLSRTL--------SSFCPE 173

Query: 546 LDSPVVEDLCLLEEKSSDVLPIALQSVPLQTERKPVSYDIAEKPTFTLPSESE---QKII 716
           L         L  + SSD              R+ +  D +   + T  SE E     + 
Sbjct: 174 L---------LQNDDSSD-------------PREDILDDGSSFTSKTATSEVEATSDDVF 211

Query: 717 SIELILDKPLSSIPGISSKQCHQLEKCDIHTLRQLLHHFPRTYADLQNAHGEIVDGNYMI 896
           + +  L   + S+PG+S +  +QL+ C  HT+++LLHHFPRTYADLQNA  +I DG Y+I
Sbjct: 212 AAQRFLATSIDSMPGLSKRHSNQLDSCGFHTMKKLLHHFPRTYADLQNAQVDIEDGQYLI 271

Query: 897 SFGRILSSRGIRAS 938
             G++LSS+G+RAS
Sbjct: 272 FVGKVLSSKGVRAS 285