BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009363
         (594 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512533.1| hypothetical protein RCOM_1435690 [Ricinus c...   108   7e-22
ref|XP_002519274.1| RNA binding protein, putative [Ricinus commu...   104   1e-20
ref|XP_002271627.2| PREDICTED: uncharacterized protein LOC100243...   101   8e-20
emb|CBI36980.3| unnamed protein product [Vitis vinifera]              101   8e-20
emb|CAN64022.1| hypothetical protein VITISV_005264 [Vitis vinifera]   101   1e-19

>ref|XP_002512533.1| hypothetical protein RCOM_1435690 [Ricinus communis]
           gi|223548494|gb|EEF49985.1| hypothetical protein
           RCOM_1435690 [Ricinus communis]
          Length = 363

 Score =  108 bits (270), Expect = 7e-22
 Identities = 56/153 (36%), Positives = 83/153 (54%), Gaps = 3/153 (1%)
 Frame = -2

Query: 569 RFFEEGNSAPSS---SALKRATEPRFINGMQVEVSLPDKHCCGAWFPATVIKKTKSDLFF 399
           R  E+    P++   + ++  TE  F  GM++EVS  ++   GAWF AT+I+    D + 
Sbjct: 194 RIIEDARKVPTTLEVNHIEAETEENFSKGMEIEVSSDEEGFQGAWFAATIIEAVGKDKYL 253

Query: 398 VQYNSLRLSVAAGLLRDIVHPKHIRPSPPENFRGIPFYEADKVDVFFYYGWWSGVITEVL 219
           ++Y +LR       LR+ +   H+RP PPE      F   D+VD  +  GWW GVI++VL
Sbjct: 254 IEYKNLRTEDDTDFLREEIDIAHLRPCPPEIIMVNSFKLLDEVDALYNDGWWVGVISKVL 313

Query: 218 PCNKYMVQFQHQSNRRTFNQNELRCHIEWISEE 120
              KY V F+  S   TF  +ELR H +WI+ E
Sbjct: 314 ADCKYTVYFRDTSEEMTFRHSELRLHHDWIAGE 346



 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 52/170 (30%), Positives = 82/170 (48%), Gaps = 6/170 (3%)
 Frame = -2

Query: 509 PRFINGMQVEVSLPDKHCCGAWFPATVIKKTKS---DLFFVQYNSLRLSVAAGL--LRDI 345
           P F NG  VEVS  D    G+W+   +IK+  S   + + ++Y  L  S  +G   L++I
Sbjct: 16  PHFKNGTVVEVSSDDDGFRGSWYTGKIIKRASSRSPNKYLIEYEKL-FSDESGKNPLKEI 74

Query: 344 VHPKHIRP-SPPENFRGIPFYEADKVDVFFYYGWWSGVITEVLPCNKYMVQFQHQSNRRT 168
           +    +RP +P E  R   F E  KVD +   GWW G ITE     K+ V F+    +  
Sbjct: 75  LDLAQLRPLAPREKKRRFRFGE--KVDAYHNDGWWEGSITEECKDGKFAVFFRGTREQIV 132

Query: 167 FNQNELRCHIEWISEESVQQLRDIGMQCNQGDVRQADQAHMCRTSLSTDI 18
           F + +LR H EW+ ++    L D  +   + +  +A++  +C   L   I
Sbjct: 133 FGEEDLRLHREWVDDQWKPPLEDESL---KEEKEEANETPLCMLYLEKSI 179


>ref|XP_002519274.1| RNA binding protein, putative [Ricinus communis]
           gi|223541589|gb|EEF43138.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 524

 Score =  104 bits (260), Expect = 1e-20
 Identities = 54/138 (39%), Positives = 77/138 (55%)
 Frame = -2

Query: 521 RATEPRFINGMQVEVSLPDKHCCGAWFPATVIKKTKSDLFFVQYNSLRLSVAAGLLRDIV 342
           R +EP F  G +VEV   ++   GAWF A +I    +D   VQY +L        LR+++
Sbjct: 172 RKSEPMFRTGTRVEVKSDEEGYVGAWFDANIIGTIGNDKLLVQYLNLVTDDETAPLREVI 231

Query: 341 HPKHIRPSPPENFRGIPFYEADKVDVFFYYGWWSGVITEVLPCNKYMVQFQHQSNRRTFN 162
             +H RP PP       F E +KVDV+F  GWW G ++EVLP +KYMV F+  +    F+
Sbjct: 232 SAEHARPCPPPIPSDAGFKEFEKVDVWFNEGWWEGQVSEVLPGSKYMVYFRSTNEELEFD 291

Query: 161 QNELRCHIEWISEESVQQ 108
            + LR H +WI  + VQ+
Sbjct: 292 HSSLRHHQKWIDGKWVQR 309



 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 44/133 (33%), Positives = 62/133 (46%)
 Frame = -2

Query: 524 KRATEPRFINGMQVEVSLPDKHCCGAWFPATVIKKTKSDLFFVQYNSLRLSVAAGLLRDI 345
           +R  +  F  G  VEV        GAWF AT++   ++D F V+Y  L        LR+ 
Sbjct: 384 ERIPKAEFSKGTMVEVRSNAVGFQGAWFAATILNVMENDKFEVKYQRLLTDDETDFLREQ 443

Query: 344 VHPKHIRPSPPENFRGIPFYEADKVDVFFYYGWWSGVITEVLPCNKYMVQFQHQSNRRTF 165
                IRPSPP      P+   + VD ++   WW G I +V   +KY V F+  +    F
Sbjct: 444 ASASDIRPSPPHIEHDYPYRLFEMVDAWYNDAWWVGRIAKVHTNSKYTVHFK-TTEELEF 502

Query: 164 NQNELRCHIEWIS 126
              ELR H EW++
Sbjct: 503 GHYELRPHQEWVN 515


>ref|XP_002271627.2| PREDICTED: uncharacterized protein LOC100243428 [Vitis vinifera]
          Length = 1214

 Score =  101 bits (252), Expect = 8e-20
 Identities = 55/143 (38%), Positives = 83/143 (58%)
 Frame = -2

Query: 524 KRATEPRFINGMQVEVSLPDKHCCGAWFPATVIKKTKSDLFFVQYNSLRLSVAAGLLRDI 345
           +R T   F  G  VEV+L ++    AWFPA V ++     + VQ  SL+ S  AG+L   
Sbjct: 279 ERTTGLIFSPGAAVEVTLNEQSSRDAWFPAIVRREIGLGSYVVQCQSLKNSGEAGVLDVT 338

Query: 344 VHPKHIRPSPPENFRGIPFYEADKVDVFFYYGWWSGVITEVLPCNKYMVQFQHQSNRRTF 165
           V   HIRPSPP    G  F   +KVD F+ YGWW+G++T+VL   +Y+V F+H +  + F
Sbjct: 339 VDNLHIRPSPPR-LEGRKFGLLEKVDAFYDYGWWNGIVTKVLTGRRYVVFFKHTNMEKEF 397

Query: 164 NQNELRCHIEWISEESVQQLRDI 96
             ++LR H+EW+  + V   +++
Sbjct: 398 IHSDLRPHMEWVDGKWVGATQEV 420



 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 44/143 (30%), Positives = 71/143 (49%), Gaps = 7/143 (4%)
 Frame = -2

Query: 503 FINGMQVEVSLPDKHCCGAWFPATVIKKT------KSDLFFVQYNSLRLS-VAAGLLRDI 345
           F  G  VEVS  +    GAW+ AT+++        K     V+Y  L +  V +  L ++
Sbjct: 8   FSKGSLVEVSSDEDGFKGAWYVATILESPPKSASKKRSRALVEYQDLLVDDVGSKPLTEV 67

Query: 344 VHPKHIRPSPPENFRGIPFYEADKVDVFFYYGWWSGVITEVLPCNKYMVQFQHQSNRRTF 165
           V    +RP PP       F   D VD F+  GWW+GVIT +   +K  V FQ+  +   F
Sbjct: 68  VDTSFLRPLPPPE-ADTNFCVNDIVDAFYRDGWWTGVITRISEDSKCTVFFQNPPDEIQF 126

Query: 164 NQNELRCHIEWISEESVQQLRDI 96
           ++++LR H EW+  + ++  + +
Sbjct: 127 DRSDLRVHKEWVDGKWIRPEKQV 149



 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 37/118 (31%), Positives = 60/118 (50%)
 Frame = -2

Query: 452 GAWFPATVIKKTKSDLFFVQYNSLRLSVAAGLLRDIVHPKHIRPSPPENFRGIPFYEADK 273
           G+W+ A +I   KS       + L     +  LR++V    +RP PP       F E D 
Sbjct: 166 GSWYVAKIIMAEKSRALVEYQDLLDGKDGSRRLREVVDTLFLRPLPPLETNA-SFGEYDI 224

Query: 272 VDVFFYYGWWSGVITEVLPCNKYMVQFQHQSNRRTFNQNELRCHIEWISEESVQQLRD 99
           VD F++ GW +GVI   +  +KY V F   +N    ++++LR H EW++ + VQ  ++
Sbjct: 225 VDTFYHDGWCTGVII-CIKDSKYTVFF--SNNEIQVDRSDLRLHKEWVNGKWVQPRKE 279


>emb|CBI36980.3| unnamed protein product [Vitis vinifera]
          Length = 1074

 Score =  101 bits (252), Expect = 8e-20
 Identities = 55/143 (38%), Positives = 83/143 (58%)
 Frame = -2

Query: 524 KRATEPRFINGMQVEVSLPDKHCCGAWFPATVIKKTKSDLFFVQYNSLRLSVAAGLLRDI 345
           +R T   F  G  VEV+L ++    AWFPA V ++     + VQ  SL+ S  AG+L   
Sbjct: 148 QRTTGLIFSPGAAVEVTLNEQSSRDAWFPAIVRREIGLGSYVVQCQSLKNSGEAGVLDVT 207

Query: 344 VHPKHIRPSPPENFRGIPFYEADKVDVFFYYGWWSGVITEVLPCNKYMVQFQHQSNRRTF 165
           V   HIRPSPP    G  F   +KVD F+ YGWW+G++T+VL   +Y+V F+H +  + F
Sbjct: 208 VDNLHIRPSPPR-LEGRKFGLLEKVDAFYDYGWWNGIVTKVLTGRRYVVFFKHTNMEKEF 266

Query: 164 NQNELRCHIEWISEESVQQLRDI 96
             ++LR H+EW+  + V   +++
Sbjct: 267 IHSDLRPHMEWVDGKWVGATQEV 289



 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 44/132 (33%), Positives = 66/132 (50%), Gaps = 7/132 (5%)
 Frame = -2

Query: 503 FINGMQVEVSLPDKHCCGAWFPATVIKKT------KSDLFFVQYNSLRLS-VAAGLLRDI 345
           F  G  VEVS  +    GAW+ AT+++        K     V+Y  L +  V +  L ++
Sbjct: 8   FSKGSLVEVSSDEDGFKGAWYVATILESPPKSASKKRSRALVEYQDLLVDDVGSKPLTEV 67

Query: 344 VHPKHIRPSPPENFRGIPFYEADKVDVFFYYGWWSGVITEVLPCNKYMVQFQHQSNRRTF 165
           V    +RP PP       F   D VD F+  GWW+GVIT +   +K  V FQ+  +   F
Sbjct: 68  VDTSFLRPLPPPE-ADTNFCVNDIVDAFYRDGWWTGVITRISEDSKCTVFFQNPPDEIQF 126

Query: 164 NQNELRCHIEWI 129
           ++++LR H EW+
Sbjct: 127 DRSDLRVHKEWV 138


>emb|CAN64022.1| hypothetical protein VITISV_005264 [Vitis vinifera]
          Length = 1348

 Score =  101 bits (251), Expect = 1e-19
 Identities = 55/142 (38%), Positives = 82/142 (57%)
 Frame = -2

Query: 521 RATEPRFINGMQVEVSLPDKHCCGAWFPATVIKKTKSDLFFVQYNSLRLSVAAGLLRDIV 342
           R T   F  G  VEV+L ++    AWFPA V ++     + VQ  SL+ S  AG+L   V
Sbjct: 199 RTTGLIFSPGAAVEVTLNEQSSRDAWFPAIVRREIGLGSYVVQCQSLKNSGEAGVLDVTV 258

Query: 341 HPKHIRPSPPENFRGIPFYEADKVDVFFYYGWWSGVITEVLPCNKYMVQFQHQSNRRTFN 162
              HIRPSPP    G  F   +KVD F+ YGWW+G++T+VL   +Y+V F+H +  + F 
Sbjct: 259 DNLHIRPSPPR-LEGRKFGLLEKVDAFYDYGWWNGIVTKVLTGRRYVVFFKHTNMEKEFI 317

Query: 161 QNELRCHIEWISEESVQQLRDI 96
            ++LR H+EW+  + V   +++
Sbjct: 318 HSDLRPHMEWVDGKWVGATQEV 339



 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 55/166 (33%), Positives = 84/166 (50%), Gaps = 6/166 (3%)
 Frame = -2

Query: 578  SEQRFFEEGNSAPSSSALKRATEPRFIN-GMQVEVSLPDKHCCGAWFPATVI----KKTK 414
            S ++ FE      S +     TE   +  G +VEVS  ++   G+W+ ATV+    KKTK
Sbjct: 1183 SARQDFERATPDFSDAGPTMVTEAEGLKKGEKVEVSSEEEGLRGSWYTATVLRPVTKKTK 1242

Query: 413  SDLFFVQYNSLRLSVAAGL-LRDIVHPKHIRPSPPENFRGIPFYEADKVDVFFYYGWWSG 237
                +V+Y++L         LR+ V    +RP PP    G  F   ++VD F+  GWW G
Sbjct: 1243 K--IYVEYHTLMSEEDDSKPLRESVDAILVRPYPPREV-GRRFKLMEEVDAFYSDGWWEG 1299

Query: 236  VITEVLPCNKYMVQFQHQSNRRTFNQNELRCHIEWISEESVQQLRD 99
            V+T+VL  ++Y V F+    +  F+Q +LR H EW+    V  L +
Sbjct: 1300 VVTQVLENSRYSVFFRTSREQIDFHQVDLRLHREWVRGNWVPPLEE 1345



 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 42/136 (30%), Positives = 68/136 (50%)
 Frame = -2

Query: 503 FINGMQVEVSLPDKHCCGAWFPATVIKKTKSDLFFVQYNSLRLSVAAGLLRDIVHPKHIR 324
           F  G  VEV + +  C G+W+ A +I   KS       + L     +  LR++V    +R
Sbjct: 8   FRQGSLVEVRINNDGCRGSWYVAKIIMAEKSRALVEYQDLLDGKDGSRRLREVVDTLFLR 67

Query: 323 PSPPENFRGIPFYEADKVDVFFYYGWWSGVITEVLPCNKYMVQFQHQSNRRTFNQNELRC 144
           P PP       F E D VD F++ GW +GVI   +  +KY V F   +N    ++++LR 
Sbjct: 68  PLPPLE-TNASFGEYDIVDTFYHDGWCTGVII-CIKDSKYTVFF--SNNEIQVDRSDLRL 123

Query: 143 HIEWISEESVQQLRDI 96
           H EW++ +    ++D+
Sbjct: 124 HKEWVNGKFNNLVKDM 139