BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009353
         (1750 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]    98   8e-18
ref|NP_567422.1| F-box/LRR-repeat protein [Arabidopsis thaliana]...    90   2e-15
ref|NP_001190724.1| F-box/LRR-repeat protein [Arabidopsis thalia...    89   3e-15
ref|NP_191445.1| putative F-box protein [Arabidopsis thaliana] g...    89   3e-15
ref|NP_198675.2| FBD-associated F-box protein [Arabidopsis thali...    87   1e-14

>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score = 97.8 bits (242), Expect = 8e-18
 Identities = 111/433 (25%), Positives = 180/433 (41%), Gaps = 48/433 (11%)
 Frame = -1

Query: 1402 DKISGLPDEVLVHILSLVDMKEVMHTSVLSKRWRYLWRSVPSLNFNSHLWRLPNK-GEWD 1226
            D IS LPDE+L HILS +  K  + TS+LSKRWRYLW SVP L+F+  LW  P+   E +
Sbjct: 10   DIISNLPDELLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDFDDELWLNPSTLVELE 69

Query: 1225 IRKEGFMEFVEKTLSLHDGFNVDKFSLYYYNPSDACARIHEWIALAVSRHVQ----HLCL 1058
             R   F  FV+  L   +   + KF L Y +  +    ++ WI +A+ R VQ    HL +
Sbjct: 70   ERIIMFQNFVDGVLRHSEVSCIKKFRLGYRD--NNLDSVYSWICIALERRVQELDLHLLI 127

Query: 1057 GHITLLPTWLLGQVTTLELR-----------SVRIPNQLPYXXXXXXXXXXXXXXLILQD 911
                 LP       T + ++           +V +P+                   +L  
Sbjct: 128  DWRVELPPMFFICKTLVVVKLSCALFLDIPTTVWLPSLKALHLKSVEYSDDDSIQKLLSG 187

Query: 910  CDYLAY---------NTFI--ISAPKLKYMRVV------------NKVCSKIKVCAPSLM 800
            C  L           N ++  +S P LK +R+                  K+ V AP+L 
Sbjct: 188  CPVLEELVIEREERDNQWVVNVSNPSLKILRIFFFTDGFAHPYEQEDQDYKVVVDAPNLE 247

Query: 799  LLQFIGEMYEDYSLDNLSSLVTAELRLDCHGSDFLKGRPVKKKKLR-CLNNFLEGICNVQ 623
             L     + +DY + +L SLV A + ++    +F +            +   L  I NV+
Sbjct: 248  YLSITDYLSKDYFVKDLPSLVKAFIDVEQDSEEFEESPHNGGISYHGPIYELLGRISNVK 307

Query: 622  SLTLSTYYFQNWPELFEEWEPIIFHKVKCLKLT-----DWQVDGDIGAIDKLLMCFPNIE 458
             L+L+     +      +++   FH +  L+       +W        +   L   PN+E
Sbjct: 308  CLSLTGVTLDSLSGTIGDYKLPTFHNMTRLEFLFIGGFNWDF------LPNFLHSSPNLE 361

Query: 457  TLRFERTVMLSQKGTGSCEKSGDQGSLLSV---SCMFPHLKNIEIQNLRRCDNVFNFLEF 287
             L  E         TG   +   +G L+ +   +C+  HLK IEI+ +   D     +E+
Sbjct: 362  ALVIE---------TGYTNELIPEGWLMPLQVPACLVLHLKEIEIRRIVGEDYELEAVEY 412

Query: 286  LVENTLNLESITL 248
            L++N   L+ +T+
Sbjct: 413  LLKNAEVLQQMTI 425


>ref|NP_567422.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
            gi|75245750|sp|Q8L7H1.1|FBL75_ARATH RecName:
            Full=F-box/LRR-repeat protein At4g14103
            gi|22136642|gb|AAM91640.1| unknown protein [Arabidopsis
            thaliana] gi|332657972|gb|AEE83372.1| F-box/LRR-repeat
            protein [Arabidopsis thaliana]
          Length = 381

 Score = 89.7 bits (221), Expect = 2e-15
 Identities = 107/382 (28%), Positives = 162/382 (42%), Gaps = 49/382 (12%)
 Frame = -1

Query: 1402 DKISGLPDEVLVHILSLVDMKEVMHTSVLSKRWRYLWRSVPSLNFNSHLWRLPNKGEWDI 1223
            D IS LPD++  HILS +  KE   TSVLSK+WRYL+  VP+L+ +  ++  P + E +I
Sbjct: 8    DVISSLPDDISSHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDDSVYLNP-ENETEI 66

Query: 1222 RKEGFMEFVEKTLSLHDGFNVDKFSLYYYNPSDACARIHEWIALAVSRHVQ----HLCLG 1055
                FM+FV++ L+L     + KFSL   +  D   RI  WI   + R V     HL L 
Sbjct: 67   -STSFMDFVDRVLALQGNSPLHKFSLKIGDGIDP-VRIIPWINNVLERGVSDLDLHLNLE 124

Query: 1054 HITLLPT---------WL---LGQVTTLELRSVRIP------------NQLPYXXXXXXX 947
               LLP+         WL    G   T+++  V +P             +          
Sbjct: 125  SEFLLPSQVYLCKTLVWLKLRFGLYPTIDVEDVHLPKLKTLYIEATHFEEHGVGLTKLLS 184

Query: 946  XXXXXXXLILQDCDYLAYNTFIISAPKLKYMRVV----NKVCSKIKVCAPSLMLLQFIGE 779
                   L+L D  +  ++   +S P LK +R      ++    + +  P+L+ L+F   
Sbjct: 185  GCPMLEDLVLDDISWFIWDFASVSVPTLKRLRFSWQERDEFPKSVLLDTPNLVYLKFTDT 244

Query: 778  MYEDYSLDNLSSLVTAELRL-----------DCHGSDFLKGRPVKKKKLRCLNNFLEGIC 632
            +   Y   NL SLV A + L             +G + + G            +F+  IC
Sbjct: 245  VAGKYPKVNLDSLVEAHIDLRLLKPLLINYHQGYGENDMVGN---------ATDFIMRIC 295

Query: 631  NVQSLTLSTYYFQNWPELFEEWEPI-IFHKVKCLKL-----TDWQVDGDIGAIDKLLMCF 470
            NV++L LS    Q    L    + I IF+ +  L +       WQ      ++  LL   
Sbjct: 296  NVKTLYLSANTLQ---VLTYSCDAIPIFNNLTHLTIESNPRVGWQ------SVPGLLKNS 346

Query: 469  PNIETLRFERTVMLSQKGTGSC 404
            PN+ETL F+    L  K T  C
Sbjct: 347  PNLETLIFQG---LIHKATYRC 365


>ref|NP_001190724.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
            gi|332657973|gb|AEE83373.1| F-box/LRR-repeat protein
            [Arabidopsis thaliana]
          Length = 443

 Score = 89.4 bits (220), Expect = 3e-15
 Identities = 103/369 (27%), Positives = 158/369 (42%), Gaps = 49/369 (13%)
 Frame = -1

Query: 1402 DKISGLPDEVLVHILSLVDMKEVMHTSVLSKRWRYLWRSVPSLNFNSHLWRLPNKGEWDI 1223
            D IS LPD++  HILS +  KE   TSVLSK+WRYL+  VP+L+ +  ++  P + E +I
Sbjct: 8    DVISSLPDDISSHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDDSVYLNP-ENETEI 66

Query: 1222 RKEGFMEFVEKTLSLHDGFNVDKFSLYYYNPSDACARIHEWIALAVSRHVQ----HLCLG 1055
                FM+FV++ L+L     + KFSL   +  D   RI  WI   + R V     HL L 
Sbjct: 67   -STSFMDFVDRVLALQGNSPLHKFSLKIGDGIDP-VRIIPWINNVLERGVSDLDLHLNLE 124

Query: 1054 HITLLPT---------WL---LGQVTTLELRSVRIP------------NQLPYXXXXXXX 947
               LLP+         WL    G   T+++  V +P             +          
Sbjct: 125  SEFLLPSQVYLCKTLVWLKLRFGLYPTIDVEDVHLPKLKTLYIEATHFEEHGVGLTKLLS 184

Query: 946  XXXXXXXLILQDCDYLAYNTFIISAPKLKYMRVV----NKVCSKIKVCAPSLMLLQFIGE 779
                   L+L D  +  ++   +S P LK +R      ++    + +  P+L+ L+F   
Sbjct: 185  GCPMLEDLVLDDISWFIWDFASVSVPTLKRLRFSWQERDEFPKSVLLDTPNLVYLKFTDT 244

Query: 778  MYEDYSLDNLSSLVTAELRL-----------DCHGSDFLKGRPVKKKKLRCLNNFLEGIC 632
            +   Y   NL SLV A + L             +G + + G            +F+  IC
Sbjct: 245  VAGKYPKVNLDSLVEAHIDLRLLKPLLINYHQGYGENDMVGN---------ATDFIMRIC 295

Query: 631  NVQSLTLSTYYFQNWPELFEEWEPI-IFHKVKCLKL-----TDWQVDGDIGAIDKLLMCF 470
            NV++L LS    Q    L    + I IF+ +  L +       WQ      ++  LL   
Sbjct: 296  NVKTLYLSANTLQ---VLTYSCDAIPIFNNLTHLTIESNPRVGWQ------SVPGLLKNS 346

Query: 469  PNIETLRFE 443
            PN+ETL F+
Sbjct: 347  PNLETLIFQ 355


>ref|NP_191445.1| putative F-box protein [Arabidopsis thaliana]
            gi|75264355|sp|Q9LXR6.1|FB207_ARATH RecName:
            Full=Putative F-box protein At3g58860
            gi|7630081|emb|CAB88303.1| putative protein [Arabidopsis
            thaliana] gi|332646320|gb|AEE79841.1| putative F-box
            protein [Arabidopsis thaliana]
          Length = 457

 Score = 89.4 bits (220), Expect = 3e-15
 Identities = 96/353 (27%), Positives = 146/353 (41%), Gaps = 36/353 (10%)
 Frame = -1

Query: 1402 DKISGLPDEVLVHILSLVDMKEVMHTSVLSKRWRYLWRSVPSLNFNSHLWRLPNKG--EW 1229
            D  S LPDEV+ HILS +  KE   TSVL+K+WRYL+  VPSL+FN   +  P +G  E 
Sbjct: 7    DLFSKLPDEVISHILSSLPTKEAASTSVLAKKWRYLFAFVPSLDFNDSDFLHPQEGKREK 66

Query: 1228 DIRKEGFMEFVEKTLSLHDGFNVDKFSLYYYNPSDACARIHEWIALAVSRHVQHLCL--- 1058
            D     FM+FV++ L+L     + KFSL      D   R+  WI   + R V HL L   
Sbjct: 67   DGILRSFMDFVDRVLALQGASPIKKFSLNVKTGVDP-DRVDRWICNVLQRGVSHLALFMD 125

Query: 1057 ----------------------GHITLLPTW----LLGQVTTLELRSVRIPNQLPYXXXX 956
                                  G+   L  W     L  + TL L SV            
Sbjct: 126  FEEEYSLPYEISVSKTLVELKTGYGVDLYLWDDDMFLPMLKTLVLESVEFGRG---QFQT 182

Query: 955  XXXXXXXXXXLILQDCDYLAYNTFIISAPKLKYMRVVNK--VCSKIKVCAPSLMLLQFIG 782
                      L+L + ++   N  I+S+  LK +++ ++      +    P+L+ L +  
Sbjct: 183  LLPACPVLEELMLLNMEWKDRNV-ILSSSSLKNLKITSEDGCLGTLSFDTPNLVFLDYYD 241

Query: 781  EMYEDYSLDNLSSLVTAELRLDCHGSDFLKGRPVKKKKLRCLNNFLEGICNVQSLTLSTY 602
             + EDY + NL +LV   + L        + R         + N + GI N +   +S  
Sbjct: 242  YVAEDYPIVNLKNLVEVGINLVLTADRINRARD-------NVWNLIHGIQNAEIFHISPV 294

Query: 601  YFQNWP---ELFEEWEPIIFHKVKCLKLTDWQVDGDIGAIDKLLMCFPNIETL 452
             F+      E    ++ +    ++ +    WQ      A+  LL   PN+ETL
Sbjct: 295  TFEVLSLSCEAMPVFKNLTTLNIRTVMQQGWQ------AMPLLLKNCPNLETL 341


>ref|NP_198675.2| FBD-associated F-box protein [Arabidopsis thaliana]
            gi|33589724|gb|AAQ22628.1| At5g38590/MBB18_14
            [Arabidopsis thaliana] gi|332006956|gb|AED94339.1|
            FBD-associated F-box protein [Arabidopsis thaliana]
          Length = 289

 Score = 87.4 bits (215), Expect = 1e-14
 Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 6/145 (4%)
 Frame = -1

Query: 1402 DKISGLPDEVLVHILSLVDMKEVMHTSVLSKRWRYLWRSVPSLNFNSHLWRLPNKGEWDI 1223
            DKI+GLPD++LV ILS V     + TS+LSKRW +LW  +P+L++ S   R P     D+
Sbjct: 2    DKINGLPDDLLVKILSYVPTDIAVSTSILSKRWEFLWMWLPNLDYTSRWCRKPG----DV 57

Query: 1222 RKEGFMEFVEKTLSLHDGFNVDKFSLYYYNPSDACARIHEWIALAVSRHVQHLCLGH--- 1052
               G  +F+ K L LH    ++    +  +P      I  WI +AVSRHV  L + H   
Sbjct: 58   ---GLRDFIHKNLPLHRAPVIESLRFHSNSPDIKPEDIRRWIEIAVSRHVHDLDIDHFSE 114

Query: 1051 ---ITLLPTWLLGQVTTLELRSVRI 986
               I L   +    + TL+LRSV +
Sbjct: 115  NENIFLSSFFACKSLVTLKLRSVTL 139