BLASTX nr result

ID: Coptis23_contig00009352 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009352
         (651 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003630609.1| ATP-dependent RNA helicase DOB1 [Medicago tr...   352   5e-95
ref|XP_002266524.2| PREDICTED: superkiller viralicidic activity ...   351   6e-95
ref|XP_003530466.1| PREDICTED: superkiller viralicidic activity ...   351   6e-95
ref|XP_003525319.1| PREDICTED: LOW QUALITY PROTEIN: superkiller ...   349   3e-94
emb|CAN65767.1| hypothetical protein VITISV_043093 [Vitis vinifera]   348   4e-94

>ref|XP_003630609.1| ATP-dependent RNA helicase DOB1 [Medicago truncatula]
           gi|355524631|gb|AET05085.1| ATP-dependent RNA helicase
           DOB1 [Medicago truncatula]
          Length = 984

 Score =  352 bits (902), Expect = 5e-95
 Identities = 177/217 (81%), Positives = 185/217 (85%)
 Frame = +1

Query: 1   VLVSAHTSAGKTAVAEYAIAMGFRDKQRVLYTSPLKALSNQKYRELSQEFSDVGLMTGDV 180
           VLVSAHTSAGKTA+AEYAIAM FRDKQRV+YTSPLKALSNQKYRELSQEF+DVGLMTGDV
Sbjct: 101 VLVSAHTSAGKTAIAEYAIAMSFRDKQRVIYTSPLKALSNQKYRELSQEFTDVGLMTGDV 160

Query: 181 TISPNANVLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEXXXXXXXXX 360
           T+SPNA  LVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERG             
Sbjct: 161 TLSPNATCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERG------------- 207

Query: 361 XXXXXXXXXXXXXRGVVWEESIIFLPPAIKMVFLSATMSNATEFAEWICNLHKQPCHVVY 540
                          VVWEESIIFLPPAIKMVFLSATMSNATEFAEWICN+HKQPCHVVY
Sbjct: 208 ---------------VVWEESIIFLPPAIKMVFLSATMSNATEFAEWICNIHKQPCHVVY 252

Query: 541 TDFRPTPLQHYVFPVGGAGLYLVVDENELFREDNFVK 651
           TDFRPTPLQHYVFP+GG+GLYLVVDENE FREDNF+K
Sbjct: 253 TDFRPTPLQHYVFPIGGSGLYLVVDENEQFREDNFLK 289


>ref|XP_002266524.2| PREDICTED: superkiller viralicidic activity 2-like 2-like [Vitis
           vinifera]
          Length = 995

 Score =  351 bits (901), Expect = 6e-95
 Identities = 179/217 (82%), Positives = 185/217 (85%)
 Frame = +1

Query: 1   VLVSAHTSAGKTAVAEYAIAMGFRDKQRVLYTSPLKALSNQKYRELSQEFSDVGLMTGDV 180
           VLVSAHTSAGKTAVAEY+IAM FRDKQRV+YTSPLKALSNQKYRELSQEFSDVGLMTGDV
Sbjct: 95  VLVSAHTSAGKTAVAEYSIAMAFRDKQRVIYTSPLKALSNQKYRELSQEFSDVGLMTGDV 154

Query: 181 TISPNANVLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEXXXXXXXXX 360
           T+SPNA+ LVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERG             
Sbjct: 155 TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERG------------- 201

Query: 361 XXXXXXXXXXXXXRGVVWEESIIFLPPAIKMVFLSATMSNATEFAEWICNLHKQPCHVVY 540
                          VVWEESIIFLP AIKMVFLSATMSNATEFAEWICNLHKQPCHVVY
Sbjct: 202 ---------------VVWEESIIFLPTAIKMVFLSATMSNATEFAEWICNLHKQPCHVVY 246

Query: 541 TDFRPTPLQHYVFPVGGAGLYLVVDENELFREDNFVK 651
           TDFRPTPLQHYVFP+GG+GLYLVVDENE FREDNFVK
Sbjct: 247 TDFRPTPLQHYVFPIGGSGLYLVVDENEQFREDNFVK 283


>ref|XP_003530466.1| PREDICTED: superkiller viralicidic activity 2-like 2-like [Glycine
           max]
          Length = 976

 Score =  351 bits (901), Expect = 6e-95
 Identities = 178/217 (82%), Positives = 185/217 (85%)
 Frame = +1

Query: 1   VLVSAHTSAGKTAVAEYAIAMGFRDKQRVLYTSPLKALSNQKYRELSQEFSDVGLMTGDV 180
           VLVSAHTSAGKTAVAEYAIAM FRDKQRV+YTSPLKALSNQKYRELSQEF+DVGLMTGDV
Sbjct: 91  VLVSAHTSAGKTAVAEYAIAMSFRDKQRVIYTSPLKALSNQKYRELSQEFTDVGLMTGDV 150

Query: 181 TISPNANVLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEXXXXXXXXX 360
           T+SPNA  LVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERG             
Sbjct: 151 TLSPNATCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERG------------- 197

Query: 361 XXXXXXXXXXXXXRGVVWEESIIFLPPAIKMVFLSATMSNATEFAEWICNLHKQPCHVVY 540
                          VVWEESIIFLPPAIKMVFLSATMSNATEFAEWICN+HKQPCHVVY
Sbjct: 198 ---------------VVWEESIIFLPPAIKMVFLSATMSNATEFAEWICNIHKQPCHVVY 242

Query: 541 TDFRPTPLQHYVFPVGGAGLYLVVDENELFREDNFVK 651
           TDFRPTPLQHYVFP+GG+GLYLVVDENE FREDNF+K
Sbjct: 243 TDFRPTPLQHYVFPMGGSGLYLVVDENEQFREDNFLK 279


>ref|XP_003525319.1| PREDICTED: LOW QUALITY PROTEIN: superkiller viralicidic activity
           2-like 2-like [Glycine max]
          Length = 982

 Score =  349 bits (895), Expect = 3e-94
 Identities = 177/217 (81%), Positives = 184/217 (84%)
 Frame = +1

Query: 1   VLVSAHTSAGKTAVAEYAIAMGFRDKQRVLYTSPLKALSNQKYRELSQEFSDVGLMTGDV 180
           VLVSAHTS GKTAVAEYAIAM FRDKQRV+YTSPLKALSNQKYRELSQEF+DVGLMTGDV
Sbjct: 97  VLVSAHTSDGKTAVAEYAIAMSFRDKQRVIYTSPLKALSNQKYRELSQEFTDVGLMTGDV 156

Query: 181 TISPNANVLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEXXXXXXXXX 360
           T+SPNA  LVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERG             
Sbjct: 157 TLSPNATCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERG------------- 203

Query: 361 XXXXXXXXXXXXXRGVVWEESIIFLPPAIKMVFLSATMSNATEFAEWICNLHKQPCHVVY 540
                          VVWEESIIFLPPAIKMVFLSATMSNATEFAEWICN+HKQPCHVVY
Sbjct: 204 ---------------VVWEESIIFLPPAIKMVFLSATMSNATEFAEWICNIHKQPCHVVY 248

Query: 541 TDFRPTPLQHYVFPVGGAGLYLVVDENELFREDNFVK 651
           TDFRPTPLQHYVFP+GG+GLYLVVDENE FREDNF+K
Sbjct: 249 TDFRPTPLQHYVFPMGGSGLYLVVDENEQFREDNFLK 285


>emb|CAN65767.1| hypothetical protein VITISV_043093 [Vitis vinifera]
          Length = 836

 Score =  348 bits (894), Expect = 4e-94
 Identities = 178/217 (82%), Positives = 184/217 (84%)
 Frame = +1

Query: 1   VLVSAHTSAGKTAVAEYAIAMGFRDKQRVLYTSPLKALSNQKYRELSQEFSDVGLMTGDV 180
           VLVSAHTSAGKTAVAEY+IAM FRDKQRV+YTSPLKALSNQKYRELSQEFSDVGLMTGDV
Sbjct: 133 VLVSAHTSAGKTAVAEYSIAMAFRDKQRVIYTSPLKALSNQKYRELSQEFSDVGLMTGDV 192

Query: 181 TISPNANVLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEXXXXXXXXX 360
           T+SPNA+ LVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERG             
Sbjct: 193 TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERG------------- 239

Query: 361 XXXXXXXXXXXXXRGVVWEESIIFLPPAIKMVFLSATMSNATEFAEWICNLHKQPCHVVY 540
                          VVWEESIIFLP AIKMVFLSATMSNATEFAEWICNLHKQPCHVVY
Sbjct: 240 ---------------VVWEESIIFLPTAIKMVFLSATMSNATEFAEWICNLHKQPCHVVY 284

Query: 541 TDFRPTPLQHYVFPVGGAGLYLVVDENELFREDNFVK 651
           TDFRPTPLQHYVFP+ G+GLYLVVDENE FREDNFVK
Sbjct: 285 TDFRPTPLQHYVFPIXGSGLYLVVDENEQFREDNFVK 321


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