BLASTX nr result
ID: Coptis23_contig00009337
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00009337 (406 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN66676.1| hypothetical protein VITISV_032909 [Vitis vinifera] 60 2e-17 ref|XP_003542451.1| PREDICTED: uncharacterized protein LOC100801... 83 2e-14 ref|XP_003625470.1| CLIP-associating protein [Medicago truncatul... 83 2e-14 ref|XP_003625469.1| CLIP-associating protein [Medicago truncatul... 83 2e-14 ref|XP_003554315.1| PREDICTED: uncharacterized protein LOC100820... 82 6e-14 >emb|CAN66676.1| hypothetical protein VITISV_032909 [Vitis vinifera] Length = 1135 Score = 59.7 bits (143), Expect(2) = 2e-17 Identities = 26/31 (83%), Positives = 30/31 (96%) Frame = +2 Query: 314 CKVARVLPRIADSAENDRNAVLRARCCDYAL 406 CKVARVLP+IAD A+NDRNAVLRARCC+Y+L Sbjct: 101 CKVARVLPKIADCAKNDRNAVLRARCCEYSL 131 Score = 53.9 bits (128), Expect(2) = 2e-17 Identities = 28/43 (65%), Positives = 31/43 (72%) Frame = +3 Query: 195 GDFEACAQMFIPVLFKFVVITVLVIAESAETTA*RRCCVTAKL 323 GDFE+CA+MFIPVLFK VVITVLVIAE CC T K+ Sbjct: 70 GDFESCAEMFIPVLFKLVVITVLVIAE---------CCGTCKV 103 >ref|XP_003542451.1| PREDICTED: uncharacterized protein LOC100801377 [Glycine max] Length = 1428 Score = 83.2 bits (204), Expect = 2e-14 Identities = 38/41 (92%), Positives = 39/41 (95%) Frame = +2 Query: 284 DNCIKTMLRNCKVARVLPRIADSAENDRNAVLRARCCDYAL 406 DNCIKTMLRNCK ARVLPRIAD A+NDRNAVLRARCCDYAL Sbjct: 392 DNCIKTMLRNCKAARVLPRIADCAKNDRNAVLRARCCDYAL 432 >ref|XP_003625470.1| CLIP-associating protein [Medicago truncatula] gi|355500485|gb|AES81688.1| CLIP-associating protein [Medicago truncatula] Length = 1156 Score = 83.2 bits (204), Expect = 2e-14 Identities = 38/41 (92%), Positives = 40/41 (97%) Frame = +2 Query: 284 DNCIKTMLRNCKVARVLPRIADSAENDRNAVLRARCCDYAL 406 DNCIKTMLRNCKVARVLPRIAD A+NDRNAVLRARCC+YAL Sbjct: 112 DNCIKTMLRNCKVARVLPRIADCAKNDRNAVLRARCCEYAL 152 >ref|XP_003625469.1| CLIP-associating protein [Medicago truncatula] gi|355500484|gb|AES81687.1| CLIP-associating protein [Medicago truncatula] Length = 1169 Score = 83.2 bits (204), Expect = 2e-14 Identities = 38/41 (92%), Positives = 40/41 (97%) Frame = +2 Query: 284 DNCIKTMLRNCKVARVLPRIADSAENDRNAVLRARCCDYAL 406 DNCIKTMLRNCKVARVLPRIAD A+NDRNAVLRARCC+YAL Sbjct: 112 DNCIKTMLRNCKVARVLPRIADCAKNDRNAVLRARCCEYAL 152 >ref|XP_003554315.1| PREDICTED: uncharacterized protein LOC100820523 [Glycine max] Length = 1444 Score = 81.6 bits (200), Expect = 6e-14 Identities = 37/40 (92%), Positives = 39/40 (97%) Frame = +2 Query: 284 DNCIKTMLRNCKVARVLPRIADSAENDRNAVLRARCCDYA 403 DNCIKTMLRNCKVARVLPRIAD A+NDRNAVLRARCC+YA Sbjct: 392 DNCIKTMLRNCKVARVLPRIADCAKNDRNAVLRARCCEYA 431 Score = 57.8 bits (138), Expect = 9e-07 Identities = 30/48 (62%), Positives = 34/48 (70%) Frame = +3 Query: 195 GDFEACAQMFIPVLFKFVVITVLVIAESAETTA*RRCCVTAKLRVCSL 338 GDFEACA+M IPVLFK VVITVLVIAESA+ C+ LR C + Sbjct: 363 GDFEACAEMLIPVLFKLVVITVLVIAESADN------CIKTMLRNCKV 404