BLASTX nr result

ID: Coptis23_contig00009337 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009337
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66676.1| hypothetical protein VITISV_032909 [Vitis vinifera]    60   2e-17
ref|XP_003542451.1| PREDICTED: uncharacterized protein LOC100801...    83   2e-14
ref|XP_003625470.1| CLIP-associating protein [Medicago truncatul...    83   2e-14
ref|XP_003625469.1| CLIP-associating protein [Medicago truncatul...    83   2e-14
ref|XP_003554315.1| PREDICTED: uncharacterized protein LOC100820...    82   6e-14

>emb|CAN66676.1| hypothetical protein VITISV_032909 [Vitis vinifera]
          Length = 1135

 Score = 59.7 bits (143), Expect(2) = 2e-17
 Identities = 26/31 (83%), Positives = 30/31 (96%)
 Frame = +2

Query: 314 CKVARVLPRIADSAENDRNAVLRARCCDYAL 406
           CKVARVLP+IAD A+NDRNAVLRARCC+Y+L
Sbjct: 101 CKVARVLPKIADCAKNDRNAVLRARCCEYSL 131



 Score = 53.9 bits (128), Expect(2) = 2e-17
 Identities = 28/43 (65%), Positives = 31/43 (72%)
 Frame = +3

Query: 195 GDFEACAQMFIPVLFKFVVITVLVIAESAETTA*RRCCVTAKL 323
           GDFE+CA+MFIPVLFK VVITVLVIAE         CC T K+
Sbjct: 70  GDFESCAEMFIPVLFKLVVITVLVIAE---------CCGTCKV 103


>ref|XP_003542451.1| PREDICTED: uncharacterized protein LOC100801377 [Glycine max]
          Length = 1428

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 38/41 (92%), Positives = 39/41 (95%)
 Frame = +2

Query: 284 DNCIKTMLRNCKVARVLPRIADSAENDRNAVLRARCCDYAL 406
           DNCIKTMLRNCK ARVLPRIAD A+NDRNAVLRARCCDYAL
Sbjct: 392 DNCIKTMLRNCKAARVLPRIADCAKNDRNAVLRARCCDYAL 432


>ref|XP_003625470.1| CLIP-associating protein [Medicago truncatula]
           gi|355500485|gb|AES81688.1| CLIP-associating protein
           [Medicago truncatula]
          Length = 1156

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 38/41 (92%), Positives = 40/41 (97%)
 Frame = +2

Query: 284 DNCIKTMLRNCKVARVLPRIADSAENDRNAVLRARCCDYAL 406
           DNCIKTMLRNCKVARVLPRIAD A+NDRNAVLRARCC+YAL
Sbjct: 112 DNCIKTMLRNCKVARVLPRIADCAKNDRNAVLRARCCEYAL 152


>ref|XP_003625469.1| CLIP-associating protein [Medicago truncatula]
           gi|355500484|gb|AES81687.1| CLIP-associating protein
           [Medicago truncatula]
          Length = 1169

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 38/41 (92%), Positives = 40/41 (97%)
 Frame = +2

Query: 284 DNCIKTMLRNCKVARVLPRIADSAENDRNAVLRARCCDYAL 406
           DNCIKTMLRNCKVARVLPRIAD A+NDRNAVLRARCC+YAL
Sbjct: 112 DNCIKTMLRNCKVARVLPRIADCAKNDRNAVLRARCCEYAL 152


>ref|XP_003554315.1| PREDICTED: uncharacterized protein LOC100820523 [Glycine max]
          Length = 1444

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 37/40 (92%), Positives = 39/40 (97%)
 Frame = +2

Query: 284 DNCIKTMLRNCKVARVLPRIADSAENDRNAVLRARCCDYA 403
           DNCIKTMLRNCKVARVLPRIAD A+NDRNAVLRARCC+YA
Sbjct: 392 DNCIKTMLRNCKVARVLPRIADCAKNDRNAVLRARCCEYA 431



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 30/48 (62%), Positives = 34/48 (70%)
 Frame = +3

Query: 195 GDFEACAQMFIPVLFKFVVITVLVIAESAETTA*RRCCVTAKLRVCSL 338
           GDFEACA+M IPVLFK VVITVLVIAESA+       C+   LR C +
Sbjct: 363 GDFEACAEMLIPVLFKLVVITVLVIAESADN------CIKTMLRNCKV 404


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