BLASTX nr result

ID: Coptis23_contig00009319 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009319
         (1182 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN94269.1| R2R3 Myb4b C2 repressor motif protein [Vitis vini...   367   2e-99
gb|AAK19619.1|AF336286_1 GHMYB9 [Gossypium hirsutum] gi|20729882...   366   5e-99
ref|XP_002278222.1| PREDICTED: myb-related protein 308 [Vitis vi...   365   2e-98
ref|XP_002263863.1| PREDICTED: myb-related protein 308 [Vitis vi...   364   2e-98
gb|ADL36756.1| MYB domain class transcription factor [Malus x do...   351   2e-94

>gb|ACN94269.1| R2R3 Myb4b C2 repressor motif protein [Vitis vinifera]
          Length = 242

 Score =  367 bits (943), Expect = 2e-99
 Identities = 178/254 (70%), Positives = 197/254 (77%)
 Frame = +3

Query: 258  MGRSPCCEKAHTNKGAWTKEEDDRLIAHIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 437
            MGRSPCCEKAHTNKGAWTKEEDDRLIAHI+AHGEGCWRSLPKAAGLLRCGKSCRLRWINY
Sbjct: 1    MGRSPCCEKAHTNKGAWTKEEDDRLIAHIQAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 60

Query: 438  LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRG 617
            LRPDLKRGNFT+EEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRG
Sbjct: 61   LRPDLKRGNFTDEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRG 120

Query: 618  VDPATHRAMNEPVSDVKTISFASVTKEEEKIVVGYECKEEKSSIIQREERCPDLNLELQI 797
            +DP THR +NEP  DV T+SF  V K+EE +  G+ CK         EE CPDLNLEL+I
Sbjct: 121  IDPLTHRPINEPAVDVATVSFGGVLKKEEVMSSGFGCKSRNPD----EENCPDLNLELRI 176

Query: 798  SPPYYQPPQDSMKSSERRSLCFSCSLGLLNSKDXXXXXXXXXXXXXXXXXXXXXXNDFLG 977
            SPP++ P    + S ERR LCF CSLGL  SK+                      +DFLG
Sbjct: 177  SPPHHHPSPPVLDSRERRMLCFYCSLGLEKSKE----------CSCSSGSGNGSSDDFLG 226

Query: 978  LRSGILDFRNWDMK 1019
            + +G+LD+RN +MK
Sbjct: 227  MNNGVLDYRNLEMK 240


>gb|AAK19619.1|AF336286_1 GHMYB9 [Gossypium hirsutum] gi|207298825|gb|ACI23564.1| MYB-like
            protein 3 [Gossypium barbadense]
          Length = 264

 Score =  366 bits (940), Expect = 5e-99
 Identities = 184/266 (69%), Positives = 204/266 (76%), Gaps = 12/266 (4%)
 Frame = +3

Query: 258  MGRSPCCEKAHTNKGAWTKEEDDRLIAHIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 437
            MGRSPCCEKAHTNKGAWTKEEDDRLIA+IRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY
Sbjct: 1    MGRSPCCEKAHTNKGAWTKEEDDRLIAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 60

Query: 438  LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRG 617
            LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRG
Sbjct: 61   LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRG 120

Query: 618  VDPATHRAMNEPVSDVKTISFASVTKEEEKI-------VVGYECKEEKSSIIQREERCPD 776
            +DPATHR +NE   DV TISF+   +E+EKI        +G+  K+EK   +Q  ERCPD
Sbjct: 121  IDPATHRPLNEASQDVTTISFSGAKEEKEKINTNSNNNPIGFITKDEKKIPVQ--ERCPD 178

Query: 777  LNLELQISPPYYQPPQDSMKSSERRSLCFSCSLGLLNSKDXXXXXXXXXXXXXXXXXXXX 956
            LNL+L+ISPPYYQ  Q     +  R+LCF CSLG+ NSKD                    
Sbjct: 179  LNLDLRISPPYYQQTQPESFKTGGRTLCFICSLGVKNSKDCTCSTITTAAGSSSSSSSHS 238

Query: 957  XXN-----DFLGLRSGILDFRNWDMK 1019
              N     DFLGL+SGIL++R+ +MK
Sbjct: 239  NSNNSSGYDFLGLKSGILEYRSLEMK 264


>ref|XP_002278222.1| PREDICTED: myb-related protein 308 [Vitis vinifera]
            gi|119220854|gb|ABL61515.1| R2R3 Myb4a C2 repressor motif
            protein [Vitis vinifera]
          Length = 251

 Score =  365 bits (936), Expect = 2e-98
 Identities = 182/261 (69%), Positives = 204/261 (78%), Gaps = 7/261 (2%)
 Frame = +3

Query: 258  MGRSPCCEKAHTNKGAWTKEEDDRLIAHIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 437
            MGRSPCCEKAHTNKGAWTKEEDDRLIA+IRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY
Sbjct: 1    MGRSPCCEKAHTNKGAWTKEEDDRLIAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 60

Query: 438  LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRG 617
            LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLL+RG
Sbjct: 61   LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLNRG 120

Query: 618  VDPATHRAMNEPVSDVKTISFASVTKEEEKIVV----GYECKEEKSSIIQREERCPDLNL 785
            +DP+THR +NEP  DV TISFA+  KEEEKI +    G+ CK EK+ +    E+CPDLNL
Sbjct: 121  IDPSTHRPINEPSPDVTTISFAAAVKEEEKINISSTGGFGCKTEKNPV---TEKCPDLNL 177

Query: 786  ELQISPPYYQPPQDSMKSSERRS---LCFSCSLGLLNSKDXXXXXXXXXXXXXXXXXXXX 956
            EL+ISPPY    +  +K+  R S   LCF+CSLG+ NS++                    
Sbjct: 178  ELRISPPYQPQAETPLKTGGRSSSTTLCFACSLGIPNSEECSCSIGTSSGSSSSGY---- 233

Query: 957  XXNDFLGLRSGILDFRNWDMK 1019
               DFLGL SG+LD+R  +MK
Sbjct: 234  ---DFLGLTSGVLDYRGLEMK 251


>ref|XP_002263863.1| PREDICTED: myb-related protein 308 [Vitis vinifera]
            gi|297734985|emb|CBI17347.3| unnamed protein product
            [Vitis vinifera]
          Length = 242

 Score =  364 bits (935), Expect = 2e-98
 Identities = 177/254 (69%), Positives = 196/254 (77%)
 Frame = +3

Query: 258  MGRSPCCEKAHTNKGAWTKEEDDRLIAHIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 437
            MGRSPCCEKAHTNKGAWTKEEDDRLIAHI+AHGEGCWRSLPKAAGLLRCGKSCRLRWINY
Sbjct: 1    MGRSPCCEKAHTNKGAWTKEEDDRLIAHIQAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 60

Query: 438  LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRG 617
            LRPDLKRGNFT+EEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRG
Sbjct: 61   LRPDLKRGNFTDEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRG 120

Query: 618  VDPATHRAMNEPVSDVKTISFASVTKEEEKIVVGYECKEEKSSIIQREERCPDLNLELQI 797
            +DP THR +NE   DV T+SF  V K+EE +  G+ CK         EE CPDLNLEL+I
Sbjct: 121  IDPLTHRPINEAAVDVATVSFGGVLKKEEVMSSGFGCKSRNPD----EENCPDLNLELRI 176

Query: 798  SPPYYQPPQDSMKSSERRSLCFSCSLGLLNSKDXXXXXXXXXXXXXXXXXXXXXXNDFLG 977
            SPP++ P    + S ERR LCF CSLGL  SK+                      +DFLG
Sbjct: 177  SPPHHHPSPPVLDSRERRMLCFYCSLGLEKSKE----------CSCSSGSGNGSSDDFLG 226

Query: 978  LRSGILDFRNWDMK 1019
            + +G+LD+RN +MK
Sbjct: 227  MNNGVLDYRNLEMK 240


>gb|ADL36756.1| MYB domain class transcription factor [Malus x domestica]
          Length = 255

 Score =  351 bits (901), Expect = 2e-94
 Identities = 181/262 (69%), Positives = 203/262 (77%), Gaps = 8/262 (3%)
 Frame = +3

Query: 258  MGRSPCCEKAHTNKGAWTKEEDDRLIAHIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 437
            MGRSPCCEKAHTNKGAWTKEEDDRLIA+IRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY
Sbjct: 1    MGRSPCCEKAHTNKGAWTKEEDDRLIAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 60

Query: 438  LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRG 617
            LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLL+RG
Sbjct: 61   LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLTRG 120

Query: 618  VDPATHRAMNE-PVSDVKTISFASVT---KEEEK---IVVGYECKEEKSSIIQREERCPD 776
            +DP THR +NE P     TISFA+ +   KEE+K   I  G  CK+ K+ +   +ERCPD
Sbjct: 121  IDPTTHRPLNETPQESATTISFAAASANIKEEDKKISITNGLVCKDSKNPV---QERCPD 177

Query: 777  LNLELQISPPYY-QPPQDSMKSSERRSLCFSCSLGLLNSKDXXXXXXXXXXXXXXXXXXX 953
            LNL+LQISPP   Q P D +KS   R LCFSCSLGL ++K+                   
Sbjct: 178  LNLDLQISPPCQPQQPSDGLKSG-GRGLCFSCSLGLQDAKNCSCGRDAIGGATSGTTNIG 236

Query: 954  XXXNDFLGLRSGILDFRNWDMK 1019
                DFLGL++G+LD+R+ +MK
Sbjct: 237  Y---DFLGLKNGVLDYRSLEMK 255


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