BLASTX nr result

ID: Coptis23_contig00009318 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009318
         (1057 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285431.1| PREDICTED: uncharacterized protein LOC100252...    75   3e-11
ref|XP_003555752.1| PREDICTED: uncharacterized protein LOC100783...    71   5e-10
ref|XP_003535997.1| PREDICTED: uncharacterized protein LOC100806...    70   9e-10
ref|XP_002312595.1| predicted protein [Populus trichocarpa] gi|2...    68   4e-09
gb|AFK34388.1| unknown [Lotus japonicus]                               65   4e-08

>ref|XP_002285431.1| PREDICTED: uncharacterized protein LOC100252766 [Vitis vinifera]
           gi|296083714|emb|CBI23703.3| unnamed protein product
           [Vitis vinifera]
          Length = 92

 Score = 75.1 bits (183), Expect = 3e-11
 Identities = 38/83 (45%), Positives = 50/83 (60%)
 Frame = +3

Query: 339 ISLDSEEVVERVGADKXXXXXXXSNALLSTRRGGISKRPKKLRRKVQWNDRTGNKLVEIL 518
           ++LDS ++  R   +        SN+LL  RRGG+S+R  K+RRKVQWNDR GNKLVE+L
Sbjct: 15  VALDSPKIENRDDGEDSE-----SNSLLPPRRGGMSRRQDKVRRKVQWNDRNGNKLVEVL 69

Query: 519 EFEPXXXXXXXXXXXXXCICNIM 587
           EF+P             CIC +M
Sbjct: 70  EFQPSDVSDTDDEESDSCICTLM 92


>ref|XP_003555752.1| PREDICTED: uncharacterized protein LOC100783330 [Glycine max]
          Length = 98

 Score = 70.9 bits (172), Expect = 5e-10
 Identities = 37/79 (46%), Positives = 44/79 (55%)
 Frame = +3

Query: 351 SEEVVERVGADKXXXXXXXSNALLSTRRGGISKRPKKLRRKVQWNDRTGNKLVEILEFEP 530
           S  V E+V           SN+LL  RRGG+S+  +K RRKVQWNDR GNKL E+LE+EP
Sbjct: 20  SSLVCEKVEDHVNGEDDSDSNSLLPPRRGGMSRNCEKTRRKVQWNDRNGNKLAEVLEYEP 79

Query: 531 XXXXXXXXXXXXXCICNIM 587
                        CIC IM
Sbjct: 80  SDVSDSEDEDSDSCICTIM 98


>ref|XP_003535997.1| PREDICTED: uncharacterized protein LOC100806080 isoform 1 [Glycine
           max]
          Length = 98

 Score = 70.1 bits (170), Expect = 9e-10
 Identities = 37/79 (46%), Positives = 44/79 (55%)
 Frame = +3

Query: 351 SEEVVERVGADKXXXXXXXSNALLSTRRGGISKRPKKLRRKVQWNDRTGNKLVEILEFEP 530
           S  V E+V           SN+LL  RRGG+S+  +K RRKVQWNDR GNKL E+LE+EP
Sbjct: 20  SSLVCEKVEDHVNGEDDSDSNSLLPPRRGGMSRNCEKTRRKVQWNDRNGNKLAEVLEYEP 79

Query: 531 XXXXXXXXXXXXXCICNIM 587
                        CIC IM
Sbjct: 80  SDVSDSEDEDSDSCICAIM 98


>ref|XP_002312595.1| predicted protein [Populus trichocarpa] gi|222852415|gb|EEE89962.1|
           predicted protein [Populus trichocarpa]
          Length = 100

 Score = 67.8 bits (164), Expect = 4e-09
 Identities = 37/63 (58%), Positives = 41/63 (65%)
 Frame = +3

Query: 342 SLDSEEVVERVGADKXXXXXXXSNALLSTRRGGISKRPKKLRRKVQWNDRTGNKLVEILE 521
           S D EE VE  G D          ALL  R+GG+S+ P K+RRKVQWND  GNKLVEILE
Sbjct: 23  SPDVEEDVEENGEDYSEF-----KALLPPRKGGMSRSPNKVRRKVQWNDNNGNKLVEILE 77

Query: 522 FEP 530
           FEP
Sbjct: 78  FEP 80


>gb|AFK34388.1| unknown [Lotus japonicus]
          Length = 107

 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 33/61 (54%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
 Frame = +3

Query: 408 SNALLSTRRGGISKRPKKLRRKVQWNDRTGNKLVEILEFEP-XXXXXXXXXXXXXCICNI 584
           SN+LL  RRGG+S+   K R KVQWNDR GNKLVE+LE+EP              CIC I
Sbjct: 47  SNSLLPPRRGGMSRNSDKTRLKVQWNDRNGNKLVEVLEYEPSDVSDSDDDEDSDSCICTI 106

Query: 585 M 587
           M
Sbjct: 107 M 107


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