BLASTX nr result

ID: Coptis23_contig00009317 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009317
         (536 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331044.1| predicted protein [Populus trichocarpa] gi|2...   215   4e-54
gb|AFK46999.1| unknown [Lotus japonicus]                              209   2e-52
ref|XP_002532339.1| protein translocase, putative [Ricinus commu...   208   4e-52
ref|XP_004136578.1| PREDICTED: outer envelope pore protein 16-3,...   204   5e-51
ref|NP_001236744.1| uncharacterized protein LOC100499840 [Glycin...   204   7e-51

>ref|XP_002331044.1| predicted protein [Populus trichocarpa] gi|222872974|gb|EEF10105.1|
           predicted protein [Populus trichocarpa]
          Length = 159

 Score =  215 bits (547), Expect = 4e-54
 Identities = 103/150 (68%), Positives = 124/150 (82%)
 Frame = +1

Query: 85  MDPSELRYLEDDDTPVMKTIKGATTGLVAGSIWGTVVATWLDVPRVERSVALPGLIKTLK 264
           MDPSE+RYLEDDDTP+MKTIKGAT GLV+G+IWGT+VATW DVPRVE+SVALPGLI+T+K
Sbjct: 1   MDPSEMRYLEDDDTPMMKTIKGATMGLVSGTIWGTIVATWHDVPRVEKSVALPGLIRTIK 60

Query: 265 LMGNHGLTFAAIGGVFIGVEQLVQHYRVKRDXXXXXXXXXXXXXIVLGLQARSIPTALSA 444
           +MGNHG+TFAAIGGV+IGVEQLVQHYR+KRD              +LG + R+I  A++A
Sbjct: 61  MMGNHGVTFAAIGGVYIGVEQLVQHYRMKRDFINGAVGGFVAGSTILGFKGRNIKNAIAA 120

Query: 445 GAALAFTSAVLDIGGQKTRVETGKEYSALT 534
           GAALA TSA++D GGQ TR++TGKEY   T
Sbjct: 121 GAALAVTSAIIDAGGQTTRMDTGKEYYPYT 150


>gb|AFK46999.1| unknown [Lotus japonicus]
          Length = 162

 Score =  209 bits (532), Expect = 2e-52
 Identities = 105/150 (70%), Positives = 123/150 (82%)
 Frame = +1

Query: 85  MDPSELRYLEDDDTPVMKTIKGATTGLVAGSIWGTVVATWLDVPRVERSVALPGLIKTLK 264
           +DP+ELRYLE+DD+ +MKTIKGATTGLVAG+IWGTVVATW DVPRVER+VALPGLI+T K
Sbjct: 4   IDPAELRYLENDDSSLMKTIKGATTGLVAGTIWGTVVATWYDVPRVERNVALPGLIRTFK 63

Query: 265 LMGNHGLTFAAIGGVFIGVEQLVQHYRVKRDXXXXXXXXXXXXXIVLGLQARSIPTALSA 444
           +MGNHGLTFAAIGGV+IGVEQLVQ++R KRD              +LG + RSI TALSA
Sbjct: 64  MMGNHGLTFAAIGGVYIGVEQLVQNFRGKRDLVNGAVGGFVAGAAILGYKGRSISTALSA 123

Query: 445 GAALAFTSAVLDIGGQKTRVETGKEYSALT 534
           G+ALAFTSAVLD GGQ  + + GKEY+A T
Sbjct: 124 GSALAFTSAVLDFGGQTMKHDDGKEYAAYT 153


>ref|XP_002532339.1| protein translocase, putative [Ricinus communis]
           gi|223527956|gb|EEF30041.1| protein translocase,
           putative [Ricinus communis]
          Length = 159

 Score =  208 bits (530), Expect = 4e-52
 Identities = 101/150 (67%), Positives = 121/150 (80%)
 Frame = +1

Query: 85  MDPSELRYLEDDDTPVMKTIKGATTGLVAGSIWGTVVATWLDVPRVERSVALPGLIKTLK 264
           MDPSELRYLED+DTP MKTIKGAT GL AG++WGT+VATW DVPRVE+ VALPGLI+T+K
Sbjct: 1   MDPSELRYLEDNDTPTMKTIKGATMGLAAGTLWGTIVATWHDVPRVEKHVALPGLIRTVK 60

Query: 265 LMGNHGLTFAAIGGVFIGVEQLVQHYRVKRDXXXXXXXXXXXXXIVLGLQARSIPTALSA 444
           +MGN+GLTFAAIGGV+IGVEQL+QH+R+KRD              V+G + RSI TA+SA
Sbjct: 61  MMGNYGLTFAAIGGVYIGVEQLIQHFRMKRDFVNGTVGGFVAGASVIGFKGRSISTAMSA 120

Query: 445 GAALAFTSAVLDIGGQKTRVETGKEYSALT 534
           GAALA TSA++D GGQ TR++ GKEY   T
Sbjct: 121 GAALAVTSALIDAGGQTTRIDNGKEYYPYT 150


>ref|XP_004136578.1| PREDICTED: outer envelope pore protein 16-3,
           chloroplastic/mitochondrial-like [Cucumis sativus]
           gi|449501899|ref|XP_004161489.1| PREDICTED: outer
           envelope pore protein 16-3,
           chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 158

 Score =  204 bits (520), Expect = 5e-51
 Identities = 102/150 (68%), Positives = 123/150 (82%)
 Frame = +1

Query: 85  MDPSELRYLEDDDTPVMKTIKGATTGLVAGSIWGTVVATWLDVPRVERSVALPGLIKTLK 264
           MD SE RYLEDDDT +MKTIKGAT G V+G+I+GT+VATW DVPRVER+VALPGL++TLK
Sbjct: 1   MDASERRYLEDDDTSLMKTIKGATMGFVSGTIFGTIVATWHDVPRVERNVALPGLVRTLK 60

Query: 265 LMGNHGLTFAAIGGVFIGVEQLVQHYRVKRDXXXXXXXXXXXXXIVLGLQARSIPTALSA 444
           +MGN+G+TFAAIGGV+IGVEQL+Q+YR+KRD              VLG + +SI TALSA
Sbjct: 61  IMGNYGMTFAAIGGVYIGVEQLLQNYRMKRDFVNGAVGGFTAGASVLGYKGKSISTALSA 120

Query: 445 GAALAFTSAVLDIGGQKTRVETGKEYSALT 534
           GAALAFTS+V+DIGGQ TR++TGKEY   T
Sbjct: 121 GAALAFTSSVIDIGGQTTRIDTGKEYYPYT 150


>ref|NP_001236744.1| uncharacterized protein LOC100499840 [Glycine max]
           gi|255627053|gb|ACU13871.1| unknown [Glycine max]
          Length = 160

 Score =  204 bits (519), Expect = 7e-51
 Identities = 103/150 (68%), Positives = 121/150 (80%)
 Frame = +1

Query: 85  MDPSELRYLEDDDTPVMKTIKGATTGLVAGSIWGTVVATWLDVPRVERSVALPGLIKTLK 264
           +D +E RYLEDDD+ +MKTIKGATTGLVAG+IWGTVVATW DVPRVER+VALPGLI+T K
Sbjct: 2   VDAAERRYLEDDDSSLMKTIKGATTGLVAGTIWGTVVATWYDVPRVERNVALPGLIRTFK 61

Query: 265 LMGNHGLTFAAIGGVFIGVEQLVQHYRVKRDXXXXXXXXXXXXXIVLGLQARSIPTALSA 444
           +MGN+GLTFAAIGGV+IGVEQLVQ+YR+KRD              +LG + RSI TALSA
Sbjct: 62  MMGNYGLTFAAIGGVYIGVEQLVQNYRMKRDLVNGAVGGFVAGATILGYRGRSIKTALSA 121

Query: 445 GAALAFTSAVLDIGGQKTRVETGKEYSALT 534
           G+ALAFTSA LD G Q  + +TGKEY+A T
Sbjct: 122 GSALAFTSAFLDFGDQTIKHDTGKEYAAYT 151


Top