BLASTX nr result

ID: Coptis23_contig00009286 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009286
         (704 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544665.1| PREDICTED: PXMP2/4 family protein 2-like iso...   317   2e-84
ref|XP_002284227.1| PREDICTED: protein Mpv17 [Vitis vinifera] gi...   312   5e-83
emb|CAN61516.1| hypothetical protein VITISV_033965 [Vitis vinifera]   312   5e-83
ref|XP_002885656.1| hypothetical protein ARALYDRAFT_479971 [Arab...   311   8e-83
ref|XP_002324994.1| predicted protein [Populus trichocarpa] gi|2...   308   7e-82

>ref|XP_003544665.1| PREDICTED: PXMP2/4 family protein 2-like isoform 1 [Glycine max]
          Length = 210

 Score =  317 bits (811), Expect = 2e-84
 Identities = 152/234 (64%), Positives = 174/234 (74%)
 Frame = +3

Query: 3   MLKLWKCYQNCLTVHPVKTQIISSGLLWGVGDIAAQTITHATLKKKHQNNSDGGETFKIN 182
           ML+LWK YQNCL VHPVKTQ+ISSGL+WG GDIAAQ +TH T KK+   ++D  + FKIN
Sbjct: 1   MLRLWKWYQNCLAVHPVKTQVISSGLIWGAGDIAAQAVTHYTAKKRVTFDADDTKEFKIN 60

Query: 183 WKRAAITGMFGLGFVGPVGHFWYEALDRXXXXXXXXXXXXXXXXXXXXXXXXXXXFIRVQ 362
           W+R + T +FGLGFVGPVGHFWYE LDR                           FIR++
Sbjct: 61  WRRVSTTSLFGLGFVGPVGHFWYEGLDR---------------------------FIRLK 93

Query: 363 LKYPPRSVRFVATKVVVDGLIFGPLDLFVFFTYMGFANGKSVTQVKEDVKRDFLPALVVE 542
           L   P S RFVATKV VDG IFGPLDL VFFTYMGF+ GKSV QVKEDVKRDFLPA V+E
Sbjct: 94  LMLKPNSFRFVATKVAVDGFIFGPLDLLVFFTYMGFSAGKSVPQVKEDVKRDFLPAFVLE 153

Query: 543 GGIWPLLQVANFRYVPVRYQLLYVNVFCLLDSAFLSWIEQQEDAKWKKWFTSTL 704
           GGIWP++QVANFR++PVRYQLLYVN FCLLDS FLSW+EQQ+DA WK+W  S L
Sbjct: 154 GGIWPIVQVANFRFIPVRYQLLYVNFFCLLDSCFLSWVEQQQDAPWKQWLKSFL 207


>ref|XP_002284227.1| PREDICTED: protein Mpv17 [Vitis vinifera]
           gi|296081890|emb|CBI20895.3| unnamed protein product
           [Vitis vinifera]
          Length = 218

 Score =  312 bits (799), Expect = 5e-83
 Identities = 149/234 (63%), Positives = 174/234 (74%)
 Frame = +3

Query: 3   MLKLWKCYQNCLTVHPVKTQIISSGLLWGVGDIAAQTITHATLKKKHQNNSDGGETFKIN 182
           +L+LWK YQ+CL VHPVKTQIISSGL+WG GDI AQTITH T K+ HQ   +  E  KIN
Sbjct: 3   LLRLWKWYQDCLAVHPVKTQIISSGLIWGFGDICAQTITHTTAKRHHQIGDEDKE-LKIN 61

Query: 183 WKRAAITGMFGLGFVGPVGHFWYEALDRXXXXXXXXXXXXXXXXXXXXXXXXXXXFIRVQ 362
           W+R A T +FG GFVGPVGHFWYE LDR                            IR +
Sbjct: 62  WRRVATTSLFGFGFVGPVGHFWYEGLDR---------------------------LIRHR 94

Query: 363 LKYPPRSVRFVATKVVVDGLIFGPLDLFVFFTYMGFANGKSVTQVKEDVKRDFLPALVVE 542
           L+  P+S RFVA KV +DG+IFGPLDL VFF+YMGF+ GKSV QVKEDVKRDFLPAL++E
Sbjct: 95  LQLQPKSFRFVAAKVAIDGIIFGPLDLLVFFSYMGFSTGKSVAQVKEDVKRDFLPALILE 154

Query: 543 GGIWPLLQVANFRYVPVRYQLLYVNVFCLLDSAFLSWIEQQEDAKWKKWFTSTL 704
           GGIWP++QV NFR++PVRYQLLYVN FCLLDS+FLSW+EQQ+DA WK+WFTS L
Sbjct: 155 GGIWPIVQVVNFRFIPVRYQLLYVNFFCLLDSSFLSWVEQQQDAPWKQWFTSFL 208


>emb|CAN61516.1| hypothetical protein VITISV_033965 [Vitis vinifera]
          Length = 218

 Score =  312 bits (799), Expect = 5e-83
 Identities = 149/234 (63%), Positives = 174/234 (74%)
 Frame = +3

Query: 3   MLKLWKCYQNCLTVHPVKTQIISSGLLWGVGDIAAQTITHATLKKKHQNNSDGGETFKIN 182
           +L+LWK YQ+CL VHPVKTQIISSGL+WG GDI AQTITH T K+ HQ   +  E  KIN
Sbjct: 3   LLRLWKWYQDCLAVHPVKTQIISSGLIWGFGDICAQTITHTTAKRXHQIGDEDKE-LKIN 61

Query: 183 WKRAAITGMFGLGFVGPVGHFWYEALDRXXXXXXXXXXXXXXXXXXXXXXXXXXXFIRVQ 362
           W+R A T +FG GFVGPVGHFWYE LDR                            IR +
Sbjct: 62  WRRVATTSLFGFGFVGPVGHFWYEGLDR---------------------------LIRHR 94

Query: 363 LKYPPRSVRFVATKVVVDGLIFGPLDLFVFFTYMGFANGKSVTQVKEDVKRDFLPALVVE 542
           L+  P+S RFVA KV +DG+IFGPLDL VFF+YMGF+ GKSV QVKEDVKRDFLPAL++E
Sbjct: 95  LQLQPKSFRFVAAKVAIDGIIFGPLDLLVFFSYMGFSTGKSVAQVKEDVKRDFLPALILE 154

Query: 543 GGIWPLLQVANFRYVPVRYQLLYVNVFCLLDSAFLSWIEQQEDAKWKKWFTSTL 704
           GGIWP++QV NFR++PVRYQLLYVN FCLLDS+FLSW+EQQ+DA WK+WFTS L
Sbjct: 155 GGIWPIVQVVNFRFIPVRYQLLYVNFFCLLDSSFLSWVEQQQDAPWKQWFTSFL 208


>ref|XP_002885656.1| hypothetical protein ARALYDRAFT_479971 [Arabidopsis lyrata subsp.
           lyrata] gi|297331496|gb|EFH61915.1| hypothetical protein
           ARALYDRAFT_479971 [Arabidopsis lyrata subsp. lyrata]
          Length = 225

 Score =  311 bits (797), Expect = 8e-83
 Identities = 147/239 (61%), Positives = 175/239 (73%), Gaps = 6/239 (2%)
 Frame = +3

Query: 3   MLKLWKCYQNCLTVHPVKTQIISSGLLWGVGDIAAQTITHATLKKK------HQNNSDGG 164
           MLKLW+ YQ CLTVHPVKTQ+ISSG LWG GD+ AQ ITH+T K +         ++D  
Sbjct: 1   MLKLWRWYQRCLTVHPVKTQVISSGFLWGFGDVTAQYITHSTAKPRLLRLTETNKDADAD 60

Query: 165 ETFKINWKRAAITGMFGLGFVGPVGHFWYEALDRXXXXXXXXXXXXXXXXXXXXXXXXXX 344
             FK+NWKR AIT MFG GFVGPVGHFWYE LD+                          
Sbjct: 61  AEFKVNWKRVAITSMFGFGFVGPVGHFWYEGLDK-------------------------- 94

Query: 345 XFIRVQLKYPPRSVRFVATKVVVDGLIFGPLDLFVFFTYMGFANGKSVTQVKEDVKRDFL 524
            FI+++L+Y P+S RFVA KV +DGLIFGP+DL VFFTYMGFA GK+  +VKE +KRDFL
Sbjct: 95  -FIKLKLRYVPKSTRFVAAKVAMDGLIFGPIDLLVFFTYMGFATGKNTAEVKEGLKRDFL 153

Query: 525 PALVVEGGIWPLLQVANFRYVPVRYQLLYVNVFCLLDSAFLSWIEQQEDAKWKKWFTST 701
           PAL +EGG WPLLQ+ANFRYVPV+YQLLYVN+FCL+DSAFLSW+EQQ+DA WK+WFTS+
Sbjct: 154 PALALEGGAWPLLQIANFRYVPVQYQLLYVNIFCLVDSAFLSWVEQQKDAAWKQWFTSS 212


>ref|XP_002324994.1| predicted protein [Populus trichocarpa] gi|222866428|gb|EEF03559.1|
           predicted protein [Populus trichocarpa]
          Length = 232

 Score =  308 bits (789), Expect = 7e-82
 Identities = 154/249 (61%), Positives = 175/249 (70%), Gaps = 17/249 (6%)
 Frame = +3

Query: 3   MLKLWKCYQNCLTVHPVKTQIISSGLLWGVGDIAAQTITHAT-----------------L 131
           MLK WK YQ+CL+ HPVKTQI+SSG LWG+GDI AQ ITH+T                 L
Sbjct: 1   MLKAWKWYQHCLSSHPVKTQIVSSGTLWGIGDIGAQYITHSTATSLLPKSVTSLRIGDLL 60

Query: 132 KKKHQNNSDGGETFKINWKRAAITGMFGLGFVGPVGHFWYEALDRXXXXXXXXXXXXXXX 311
              +  N++G E FKINWKR AIT MFG GFVGPVGHFWYE LDR               
Sbjct: 61  LVIYFKNNEGAE-FKINWKRVAITSMFGFGFVGPVGHFWYEGLDR--------------- 104

Query: 312 XXXXXXXXXXXXFIRVQLKYPPRSVRFVATKVVVDGLIFGPLDLFVFFTYMGFANGKSVT 491
                       FIR++    P+S RFVATKV  DG+IFGP DLFVFFTYMGF+ GK+V 
Sbjct: 105 ------------FIRLRFLLQPKSPRFVATKVAADGIIFGPFDLFVFFTYMGFSTGKNVA 152

Query: 492 QVKEDVKRDFLPALVVEGGIWPLLQVANFRYVPVRYQLLYVNVFCLLDSAFLSWIEQQED 671
           QVKEDVKRDFLPAL++EGG+WP+ QV NFRYVPVRYQLLYVNVFCL+DSAFLSWIEQQ+D
Sbjct: 153 QVKEDVKRDFLPALILEGGVWPIFQVVNFRYVPVRYQLLYVNVFCLIDSAFLSWIEQQKD 212

Query: 672 AKWKKWFTS 698
           A WK+WFTS
Sbjct: 213 APWKQWFTS 221


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