BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009279
         (1527 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279968.2| PREDICTED: poly(A) polymerase-like [Vitis vi...   317   5e-84
emb|CAN61208.1| hypothetical protein VITISV_015447 [Vitis vinifera]   296   7e-78
ref|XP_003534153.1| PREDICTED: poly(A) polymerase-like [Glycine ...   286   8e-75
ref|XP_003620365.1| Poly(A) polymerase [Medicago truncatula] gi|...   279   2e-72
ref|XP_004137491.1| PREDICTED: poly(A) polymerase-like [Cucumis ...   278   4e-72

>ref|XP_002279968.2| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
          Length = 757

 Score =  317 bits (812), Expect = 5e-84
 Identities = 193/422 (45%), Positives = 249/422 (59%), Gaps = 9/422 (2%)
 Frame = -2

Query: 1523 TLFEPYPFFESYKNYLQIDIAAANDEDLRNWKGWVESRLRLLTLRIERDTYSLLQCIPFP 1344
            TL EPYPFFE+YKNYLQI+IAA N +DLR WKGWVESRLR LTL+IER TY++LQC P P
Sbjct: 357  TLCEPYPFFEAYKNYLQIEIAAENADDLRKWKGWVESRLRQLTLKIERHTYNMLQCHPHP 416

Query: 1343 VDFSDKSRPYHCCYFMGLQRKQGVLAKKGQEFDIRATVDDFKLVVGEYNTWKPGMGIHVT 1164
             DFSDKSRP+HCCYFMGLQRKQGV A +G++FDIR TVD+FK  VG Y  WKPGM IHV 
Sbjct: 417  GDFSDKSRPFHCCYFMGLQRKQGVPASEGEQFDIRLTVDEFKHSVGMYTLWKPGMEIHVI 476

Query: 1163 HVRRKNIPHFVFPGGVRP-RPAKGSAWAGRSSSKAAVPNFSHVDKSRESTGEVDETDRGR 987
            HVRR+NIP+FVFPGGVRP RP K          +   PN S       +   ++  +  +
Sbjct: 477  HVRRRNIPNFVFPGGVRPSRPTK----VASERRRVLEPNVS-------TQAVLEGAEDSK 525

Query: 986  KRKPNDNDIDSNSRSAKYLAVVSSPNEGVFGGTESCSPPIVGLSRSPAKLATAGSGVHAD 807
            KRK  D ++++NSR+AK L   +S +  V     S +P +  ++    K+ +    +   
Sbjct: 526  KRKREDENVETNSRNAKCLVAAASSSHEVL----SSNPLVSTVNACSIKVDSMDINMLGK 581

Query: 806  VPEDVKNRNPVEDNLDGFSKNASYHPEIARDGDGLPEGLRSSRP---LSTTAGSLCVKEA 636
                   +  VE+N++   KN +   E+      +   +R S P   LS++ GS    EA
Sbjct: 582  T-----RKEKVENNIEHGLKNLNNSVEVPPQNGEVDGSVRCSHPIKTLSSSGGSPSSTEA 636

Query: 635  EELAIENI-SGPSVGHQGFPDELDELDNDFDSKKAI-DVGGGNKDTQLE---AIVMEVKA 471
            E++AIE I SGP V HQ FP ELDEL++D + K  + D  G  K +  E   A V E   
Sbjct: 637  EKIAIEKIMSGPYVSHQAFPGELDELEDDVEYKNQVKDFTGSTKGSSAESSKANVAEEPL 696

Query: 470  TSGNEVSLHADFFQNSGXXXXXXXXXVAPSSNGLPVSTSATQRKPLIRLSLTTLAKATGG 291
            T+ +          N G         + P S G   S S  Q+KP+IRLS T+LAKATG 
Sbjct: 697  TTTSGTVPCTILSPNGGLEELEPAELMPPLSYGNRPS-STEQKKPIIRLSFTSLAKATGK 755

Query: 290  ST 285
            ST
Sbjct: 756  ST 757


>emb|CAN61208.1| hypothetical protein VITISV_015447 [Vitis vinifera]
          Length = 1097

 Score =  296 bits (759), Expect = 7e-78
 Identities = 182/413 (44%), Positives = 238/413 (57%), Gaps = 9/413 (2%)
 Frame = -2

Query: 1523 TLFEPYPFFESYKNYLQIDIAAANDEDLRNWKGWVESRLRLLTLRIERDTYSLLQCIPFP 1344
            TL EPYPFFE+YKNYLQI+IAA N +DLR WKGWVESRLR LTL+IER TY++LQC P P
Sbjct: 537  TLCEPYPFFEAYKNYLQIEIAAENADDLRKWKGWVESRLRQLTLKIERHTYNMLQCHPHP 596

Query: 1343 VDFSDKSRPYHCCYFMGLQRKQGVLAKKGQEFDIRATVDDFKLVVGEYNTWKPGMGIHVT 1164
             DFSDKSRP+HCCYFMGLQRKQGV A +G++FDIR TVD+FK  VG Y  WKPGM IHV 
Sbjct: 597  GDFSDKSRPFHCCYFMGLQRKQGVPASEGEQFDIRLTVDEFKHSVGMYTLWKPGMEIHVI 656

Query: 1163 HVRRKNIPHFVFPGGVRP-RPAKGSAWAGRSSSKAAVPNFSHVDKSRESTGEVDETDRGR 987
            HVRR+NIP+FVFPGGVRP RP K          +   PN S       +   ++  +  +
Sbjct: 657  HVRRRNIPNFVFPGGVRPSRPTK----VASERRRVLEPNVS-------TQAVLEGAEDSK 705

Query: 986  KRKPNDNDIDSNSRSAKYLAVVSSPNEGVFGGTESCSPPIVGLSRSPAKLATAGSGVHAD 807
            KRK  D ++++NSR+AK L   +S +  V     S +P +  ++    K+ +    +   
Sbjct: 706  KRKREDENVETNSRNAKCLVAAASSSHEVL----SSNPLVSTVNACSIKVDSMDINMLGK 761

Query: 806  VPEDVKNRNPVEDNLDGFSKNASYHPEIARDGDGLPEGLRSSRP---LSTTAGSLCVKEA 636
                   +  VE+N++   KN +   E+      +   +R S P   LS++ GS    EA
Sbjct: 762  T-----RKEKVENNIEHGLKNLNNSVEVPPQNGEVDGSVRCSHPIKTLSSSGGSPSSTEA 816

Query: 635  EELAIENI-SGPSVGHQGFPDELDELDNDFDSKKAI-DVGGGNKDTQLE---AIVMEVKA 471
            E++AIE I SGP V HQ FP ELDEL++D + K  + D  G  K +  E   A V E   
Sbjct: 817  EKIAIEKIMSGPYVSHQAFPGELDELEDDVEYKNQVKDFTGSTKGSSAESSKANVAEEPL 876

Query: 470  TSGNEVSLHADFFQNSGXXXXXXXXXVAPSSNGLPVSTSATQRKPLIRLSLTT 312
            T+ +          N G         + P S G   S S  Q+KP+I  +  T
Sbjct: 877  TTTSGTVPCTILSPNGGLEELEPAELMPPLSYGNRPS-STEQKKPIISFTNQT 928


>ref|XP_003534153.1| PREDICTED: poly(A) polymerase-like [Glycine max]
          Length = 757

 Score =  286 bits (733), Expect = 8e-75
 Identities = 173/419 (41%), Positives = 230/419 (54%), Gaps = 6/419 (1%)
 Frame = -2

Query: 1526 NTLFEPYPFFESYKNYLQIDIAAANDEDLRNWKGWVESRLRLLTLRIERDTYSLLQCIPF 1347
            +TLFEPYPFFESYKNYLQIDI A N +DLR WKGWVESRLR LTL+IER TY +LQC P 
Sbjct: 356  DTLFEPYPFFESYKNYLQIDITAENADDLRQWKGWVESRLRQLTLKIERHTYGMLQCHPH 415

Query: 1346 PVDFSDKSRPYHCCYFMGLQRKQGVLAKKGQEFDIRATVDDFKLVVGEYNTWKPGMGIHV 1167
            P +FSD SRP+H CYFMGLQRKQGV   +G++FDIR TV++FK  V  Y  WKPGM IHV
Sbjct: 416  PGEFSDNSRPFHHCYFMGLQRKQGVPVNEGEQFDIRLTVEEFKHSVNAYTLWKPGMNIHV 475

Query: 1166 THVRRKNIPHFVFPGGVRPR-PAKGSAWAGRSSSKAAVPNFSHVDKSRESTGEVDETDRG 990
            +HV+R+NIP+++FPGGVRP  P+K +A   + SSK+ VP     +K +     V   D  
Sbjct: 476  SHVKRRNIPNYIFPGGVRPTFPSKVTA-ENKQSSKSRVPGHGQAEKPQGGKTVVVGADDV 534

Query: 989  RKRKPNDNDIDSNSRSAKYLAVVSSPNEGVFGGTESCSPPIVGLSRSPAKLATAGSGVHA 810
            RKRK +++ +D+N R++K    ++ P+  V    E  SP             +A S    
Sbjct: 535  RKRKRSEDIMDNNPRNSKSPVSLAPPSREV---NEDISP------------ISASSSCSM 579

Query: 809  DVPEDVKNRNPVEDNLDGFSKNASYHPEIARDGDGLPEGLRSSRPLSTTAGSLCVKEAEE 630
               E   N    + +      +    P      +G     +   P+   A +   KE E+
Sbjct: 580  KFDESEVNSIGGQKSEKPCLNSPGEIPSGDSGTNGSVTNNQQVNPVLAAADTSNSKEEEK 639

Query: 629  LAIENI-SGPSVGHQGFPDELDELDNDFDSKKAIDVGGGNKDTQLEAIVMEVKATS---- 465
            LAIE I SGP   HQ FP+E +EL++D   K      GGN    +E+++ +         
Sbjct: 640  LAIEKIMSGPYDAHQAFPEEPEELEDDTQYKNQDKDSGGNMKNNMESLLSKPAVAEEPVI 699

Query: 464  GNEVSLHADFFQNSGXXXXXXXXXVAPSSNGLPVSTSATQRKPLIRLSLTTLAKATGGS 288
              E++     F N            AP  +G P       +KPLIRL+ T+L KA   S
Sbjct: 700  SKEITCSTHLFSNEILEELEPAELSAPLLSGPP--APLPMKKPLIRLNFTSLGKAADKS 756


>ref|XP_003620365.1| Poly(A) polymerase [Medicago truncatula] gi|355495380|gb|AES76583.1|
            Poly(A) polymerase [Medicago truncatula]
          Length = 752

 Score =  279 bits (713), Expect = 2e-72
 Identities = 181/428 (42%), Positives = 234/428 (54%), Gaps = 14/428 (3%)
 Frame = -2

Query: 1526 NTLFEPYPFFESYKNYLQIDIAAANDEDLRNWKGWVESRLRLLTLRIERDTYSLLQCIPF 1347
            +TLFEPYPFFE+YKNYLQIDI A N +DLR WKGWVESRLR LTL+IE+ TY +LQC P+
Sbjct: 356  DTLFEPYPFFEAYKNYLQIDITAENPDDLRQWKGWVESRLRQLTLKIEKYTYGMLQCHPY 415

Query: 1346 PVDFSDKSRPYHCCYFMGLQRKQGVLAKKGQEFDIRATVDDFKLVVGEYNTWKPGMGIHV 1167
            P +FSDKSR +H CYFMGLQRKQGV   +G++FDIR TV++FK  V  Y  WKPGM I V
Sbjct: 416  PGEFSDKSRSFHQCYFMGLQRKQGVPVSEGEQFDIRQTVEEFKHNVNAYTAWKPGMDIRV 475

Query: 1166 THVRRKNIPHFVFPGGVRPRPAKGSAWAGRSSSKAAVPNFSHVDKSRESTGEVDETDRGR 987
            +HV+R+NIP+F+FPGGVRP          R SSK+ V   S  +KS+     V   D  R
Sbjct: 476  SHVKRRNIPNFIFPGGVRPSVPSRVNGENRRSSKSRVAGQSQSEKSQGGKAVVLGADDER 535

Query: 986  KRKPNDNDIDSNSRSAKYLAVVSSPNEGV------FGGTESCSPPIVGLSRSPAKLATAG 825
            KRK  +++  +NSR +K  A VS PN  V      F  T SCS     +    +++ + G
Sbjct: 536  KRKRLEDN--NNSRVSKSSASVSPPNRNVPEDRNPFSATSSCS-----MKFDDSEVNSMG 588

Query: 824  SGVHADVPEDVKNRNPVEDNLDGFSKNASYHPEIARDGDGLPEGLRSSRPLSTTAGSLCV 645
                     D K+            K+    P     GD +  G  +         +   
Sbjct: 589  ---------DQKSEKLC-------LKSVGEIPA----GDSVTNGSATDNKQLDAPDTSNT 628

Query: 644  KEAEELAIENI-SGPSVGHQGFPDELDELDNDFDSKKAI-DVGGGNKDTQLEA-----IV 486
            KE E LAIE+I +GP   HQ   +E DEL+ D   +  + D GG  K    ++     +V
Sbjct: 629  KEEERLAIEHIMAGPYEAHQALTEEPDELEQDMGYRNQVNDNGGSVKSNNFDSSNPNPVV 688

Query: 485  MEVKATSGNEV-SLHADFFQNSGXXXXXXXXXVAPSSNGLPVSTSATQRKPLIRLSLTTL 309
            +E +  S   V S H+  F N G          AP   G+P      Q+KPLIRL+ T+L
Sbjct: 689  VEDQVISKETVCSTHS--FCNGGLEELEPAELTAPLFCGIPAPVP--QKKPLIRLNFTSL 744

Query: 308  AKATGGST 285
             KA   ST
Sbjct: 745  GKAVNKST 752


>ref|XP_004137491.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
            gi|449521033|ref|XP_004167536.1| PREDICTED: poly(A)
            polymerase-like [Cucumis sativus]
          Length = 748

 Score =  278 bits (710), Expect = 4e-72
 Identities = 180/421 (42%), Positives = 235/421 (55%), Gaps = 12/421 (2%)
 Frame = -2

Query: 1526 NTLFEPYPFFESYKNYLQIDIAAANDEDLRNWKGWVESRLRLLTLRIERDTYSLLQCIPF 1347
            +TLFEPYPFFE+YKNYLQIDI A ND+D+R WKGWVESRLR LTL+IER TY++LQC P+
Sbjct: 356  DTLFEPYPFFEAYKNYLQIDITAENDDDIRIWKGWVESRLRQLTLKIERHTYNMLQCHPY 415

Query: 1346 PVDFSDKSRPYHCCYFMGLQRKQGVLAKKGQEFDIRATVDDFKLVVGEYNTWKPGMGIHV 1167
            P DFSDKSRP+H CYFMGLQRKQG  A  G++FDIR TVD+FK  V  Y   K GM I+V
Sbjct: 416  PGDFSDKSRPFHHCYFMGLQRKQGGPASGGEQFDIRLTVDEFKHSVNVYTQRKRGMEIYV 475

Query: 1166 THVRRKNIPHFVFPGGVRPRPAKGSAWAGRSSSKAAVPNFSHVDKSRESTGEVDETDRGR 987
            +HV+R++IP+FVFPGGVRP  A    W  R SS+    + + VD   E+T  +D  DR R
Sbjct: 476  SHVKRRSIPNFVFPGGVRPSRASKLTWDIRRSSELKASDSTQVDSPSEATESLDGDDR-R 534

Query: 986  KRKPNDNDIDSNSRSAKYLAVVSSPNEGVF-----GGTESCSPPIVGLSRSPAKLATAGS 822
            KR   D++ ++N R+ + LA+  S  E V        T SCS   V    + A       
Sbjct: 535  KRIRIDDNANTNLRNGECLAMAHSHPEEVHEVSQVSNTSSCSIKDVNFIPTSA------- 587

Query: 821  GVHADVPEDVKNRNPVEDNLDGFSKNASYHPEIARDGDGLPEGLRSSRPLSTTAGSLCVK 642
                         N +E+  D  S+N   H         L     ++      A +   K
Sbjct: 588  -------------NNLENLADVSSQNNGDH-------GSLRVSPSTNNVSDAAADTSNCK 627

Query: 641  EAEELAIENISGPSV-GHQGFPDELDELDNDFD-SKKAIDVGGGNKDTQLEAIV-----M 483
            EAE+LAI+ I   S   HQ FP E +EL+ DFD + +A D G   + + + + V     +
Sbjct: 628  EAEKLAIQKILSDSYDSHQDFPCETEELE-DFDYNNQAKDFGATKQGSPMMSSVANTSPL 686

Query: 482  EVKATSGNEVSLHADFFQNSGXXXXXXXXXVAPSSNGLPVSTSATQRKPLIRLSLTTLAK 303
             +   S NE    +  + N G         VAP S G   +    +RKP+IRLS T+L K
Sbjct: 687  VLPTVSCNEARQSSSSYYNGGLEELEPAEIVAPLSTG---TAPVAERKPIIRLSFTSLGK 743

Query: 302  A 300
            A
Sbjct: 744  A 744