BLASTX nr result

ID: Coptis23_contig00009269 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009269
         (709 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_190747.1| transmembrane protein G1P-related 1 [Arabidopsi...    74   2e-11
ref|XP_002877824.1| hypothetical protein ARALYDRAFT_485534 [Arab...    74   2e-11
ref|XP_003540712.1| PREDICTED: cytochrome c-type biogenesis prot...    72   1e-10
ref|XP_003539061.1| PREDICTED: cytochrome c-type biogenesis prot...    72   1e-10
ref|XP_002273859.1| PREDICTED: cytochrome c-type biogenesis prot...    70   4e-10

>ref|NP_190747.1| transmembrane protein G1P-related 1 [Arabidopsis thaliana]
           gi|1657615|gb|AAB18126.1| G1p [Arabidopsis thaliana]
           gi|3068706|gb|AAC14406.1| putative transmembrane protein
           G1p [Arabidopsis thaliana] gi|28416645|gb|AAO42853.1|
           At3g51790 [Arabidopsis thaliana]
           gi|110743169|dbj|BAE99476.1| Cytochrome C Maturation G1p
           [Arabidopsis thaliana] gi|332645322|gb|AEE78843.1|
           transmembrane protein G1P-related 1 [Arabidopsis
           thaliana]
          Length = 256

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 37/61 (60%), Positives = 48/61 (78%)
 Frame = -3

Query: 707 IKPHNEESKDECASNRKKFAEKAMELGCYFSATDVLAKHDEKYMPQEVAAAIQRNKAKIE 528
           IKP+ +E + E ++  K  ++KA  L C+FSAT+VLAKHDEKYMPQEVAAAI++NK  IE
Sbjct: 186 IKPYTDEVRKEVST--KPISKKARNLDCFFSATEVLAKHDEKYMPQEVAAAIEKNKKIIE 243

Query: 527 A 525
           A
Sbjct: 244 A 244


>ref|XP_002877824.1| hypothetical protein ARALYDRAFT_485534 [Arabidopsis lyrata subsp.
           lyrata] gi|297323662|gb|EFH54083.1| hypothetical protein
           ARALYDRAFT_485534 [Arabidopsis lyrata subsp. lyrata]
          Length = 257

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 37/61 (60%), Positives = 48/61 (78%)
 Frame = -3

Query: 707 IKPHNEESKDECASNRKKFAEKAMELGCYFSATDVLAKHDEKYMPQEVAAAIQRNKAKIE 528
           IKP+ +E + E ++  K  ++KA  L C+FSAT+VLAKHDEKYMPQEVAAAI++NK  IE
Sbjct: 185 IKPYTDEVRKEVST--KPVSQKARNLDCFFSATEVLAKHDEKYMPQEVAAAIEKNKKIIE 242

Query: 527 A 525
           A
Sbjct: 243 A 243


>ref|XP_003540712.1| PREDICTED: cytochrome c-type biogenesis protein CcmE-like [Glycine
           max]
          Length = 249

 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 35/60 (58%), Positives = 47/60 (78%)
 Frame = -3

Query: 707 IKPHNEESKDECASNRKKFAEKAMELGCYFSATDVLAKHDEKYMPQEVAAAIQRNKAKIE 528
           +KP  +E + E ++  K  +EKA ++ CYFSAT+VLAKHDEKYMP+EVAAAI++NK  IE
Sbjct: 173 VKPFTDEIRKEVSA--KNVSEKARKIECYFSATEVLAKHDEKYMPKEVAAAIEKNKKIIE 230


>ref|XP_003539061.1| PREDICTED: cytochrome c-type biogenesis protein CcmE-like [Glycine
           max]
          Length = 240

 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 36/60 (60%), Positives = 46/60 (76%)
 Frame = -3

Query: 707 IKPHNEESKDECASNRKKFAEKAMELGCYFSATDVLAKHDEKYMPQEVAAAIQRNKAKIE 528
           +KP  EE + E +   K  +EKA ++ CYFSAT+VLAKHDEKYMP+EVAAAI++NK  IE
Sbjct: 164 VKPFTEEIRKEVSV--KNVSEKARKIECYFSATEVLAKHDEKYMPKEVAAAIEKNKKIIE 221


>ref|XP_002273859.1| PREDICTED: cytochrome c-type biogenesis protein CcmE [Vitis
           vinifera] gi|147791890|emb|CAN61824.1| hypothetical
           protein VITISV_008494 [Vitis vinifera]
          Length = 258

 Score = 70.1 bits (170), Expect = 4e-10
 Identities = 37/60 (61%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
 Frame = -3

Query: 707 IKPHNEE-SKDECASNRKKFAEKAMELGCYFSATDVLAKHDEKYMPQEVAAAIQRNKAKI 531
           +KP  +E  KDE A   +  A KA  + CYFSA +VLAKHDEKYMPQEVAAAI+RNK K+
Sbjct: 189 VKPFTDEIRKDESA---RSVAGKARSIDCYFSAIEVLAKHDEKYMPQEVAAAIERNKKKL 245


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