BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009268
         (667 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004162536.1| PREDICTED: U4/U6 small nuclear ribonucleopro...   152   7e-35
ref|XP_004146749.1| PREDICTED: U4/U6 small nuclear ribonucleopro...   152   7e-35
gb|AFN53638.1| hypothetical protein [Linum usitatissimum]             149   5e-34
ref|XP_003535893.1| PREDICTED: U4/U6 small nuclear ribonucleopro...   148   8e-34
ref|XP_002276914.1| PREDICTED: U4/U6 small nuclear ribonucleopro...   147   2e-33

>ref|XP_004162536.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like
           protein-like [Cucumis sativus]
          Length = 568

 Score =  152 bits (383), Expect = 7e-35
 Identities = 78/100 (78%), Positives = 87/100 (87%), Gaps = 2/100 (2%)
 Frame = +1

Query: 373 PKRTA--SSMEYEVSEESKLARERHEKAVQELLMKRRAHALAVPTNDSAVRARLRRLGEP 546
           P RTA  S+ EYE+SEES+ ARERHEKA+QE LMKRRA ALAVPTND AVRARLRRLGEP
Sbjct: 94  PSRTAPGSTAEYEISEESRQARERHEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEP 153

Query: 547 ITLFGEKEMERRDRLRMIMVKLDNEGQLDRLFKAHEDEEA 666
           ITLFGE+EMERRDRLR IM +LD EGQL++L K HE+EEA
Sbjct: 154 ITLFGEREMERRDRLRSIMARLDAEGQLEKLMKVHEEEEA 193


>ref|XP_004146749.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like
           protein-like [Cucumis sativus]
          Length = 569

 Score =  152 bits (383), Expect = 7e-35
 Identities = 78/100 (78%), Positives = 87/100 (87%), Gaps = 2/100 (2%)
 Frame = +1

Query: 373 PKRTA--SSMEYEVSEESKLARERHEKAVQELLMKRRAHALAVPTNDSAVRARLRRLGEP 546
           P RTA  S+ EYE+SEES+ ARERHEKA+QE LMKRRA ALAVPTND AVRARLRRLGEP
Sbjct: 95  PSRTAPGSTAEYEISEESRQARERHEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEP 154

Query: 547 ITLFGEKEMERRDRLRMIMVKLDNEGQLDRLFKAHEDEEA 666
           ITLFGE+EMERRDRLR IM +LD EGQL++L K HE+EEA
Sbjct: 155 ITLFGEREMERRDRLRSIMARLDAEGQLEKLMKVHEEEEA 194


>gb|AFN53638.1| hypothetical protein [Linum usitatissimum]
          Length = 685

 Score =  149 bits (376), Expect = 5e-34
 Identities = 72/93 (77%), Positives = 85/93 (91%)
 Frame = +1

Query: 388 SSMEYEVSEESKLARERHEKAVQELLMKRRAHALAVPTNDSAVRARLRRLGEPITLFGEK 567
           + + YE+SEES+L RER +KA+QEL+MKRRA ALAVPTND AVRARLRRLGEPITLFGE+
Sbjct: 237 TGLAYEISEESRLVRERQQKAIQELMMKRRAAALAVPTNDMAVRARLRRLGEPITLFGER 296

Query: 568 EMERRDRLRMIMVKLDNEGQLDRLFKAHEDEEA 666
           EMERRDRLRM+M KLD+EGQL++L KAHE+EEA
Sbjct: 297 EMERRDRLRMLMAKLDSEGQLEKLMKAHEEEEA 329


>ref|XP_003535893.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like
           protein-like [Glycine max]
          Length = 570

 Score =  148 bits (374), Expect = 8e-34
 Identities = 74/90 (82%), Positives = 82/90 (91%)
 Frame = +1

Query: 397 EYEVSEESKLARERHEKAVQELLMKRRAHALAVPTNDSAVRARLRRLGEPITLFGEKEME 576
           EYE+SEES+L RER EKA+QEL+MKRRA ALAVPTND AVRARLR LGEPITLFGE+EME
Sbjct: 108 EYEISEESRLVRERQEKAMQELMMKRRAAALAVPTNDMAVRARLRHLGEPITLFGEREME 167

Query: 577 RRDRLRMIMVKLDNEGQLDRLFKAHEDEEA 666
           RRDRLRMIM KLD EGQL++L KAHE+EEA
Sbjct: 168 RRDRLRMIMAKLDAEGQLEKLMKAHEEEEA 197


>ref|XP_002276914.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like
           protein-like [Vitis vinifera]
          Length = 577

 Score =  147 bits (370), Expect = 2e-33
 Identities = 74/95 (77%), Positives = 83/95 (87%)
 Frame = +1

Query: 382 TASSMEYEVSEESKLARERHEKAVQELLMKRRAHALAVPTNDSAVRARLRRLGEPITLFG 561
           + S++EYE+SEES+  RER EKA QE LMKRRA ALAVPTND AVR RLRRLGEPITLFG
Sbjct: 107 SGSAVEYEISEESRQFRERQEKAKQEFLMKRRASALAVPTNDMAVRTRLRRLGEPITLFG 166

Query: 562 EKEMERRDRLRMIMVKLDNEGQLDRLFKAHEDEEA 666
           E+EMERRDRLRMIM KLD EGQL++L KAHE+EEA
Sbjct: 167 EREMERRDRLRMIMAKLDAEGQLEKLMKAHEEEEA 201