BLASTX nr result

ID: Coptis23_contig00009263 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009263
         (571 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN84113.1| hypothetical protein VITISV_000909 [Vitis vinifera]    92   8e-17
gb|EEC84281.1| hypothetical protein OsI_30752 [Oryza sativa Indi...    90   2e-16
gb|ABA97336.1| transposon protein, putative, CACTA, En/Spm sub-c...    90   3e-16
gb|EEE62823.1| hypothetical protein OsJ_17626 [Oryza sativa Japo...    90   3e-16
emb|CAN78763.1| hypothetical protein VITISV_003315 [Vitis vinifera]    88   1e-15

>emb|CAN84113.1| hypothetical protein VITISV_000909 [Vitis vinifera]
          Length = 339

 Score = 91.7 bits (226), Expect = 8e-17
 Identities = 51/147 (34%), Positives = 81/147 (55%), Gaps = 1/147 (0%)
 Frame = -3

Query: 482 CDWWDVGNGRSGIQTDGH-VTSVNVSRTWYKDDRFVLATQPGQVFYVSDTKLRGSWQVVQ 306
           CDWWDV +   G Q D +  TS+NV+  W  ++ FVLA+Q  Q+FYV+DTKL  +W+V+ 
Sbjct: 86  CDWWDVDHEGRGFQIDKYNYTSINVTEKWNTNEPFVLASQIEQIFYVNDTKLGSNWKVMV 145

Query: 305 KIKPRNGYDVAEREEEIVAGHGVTFQEEEQDAVDGIVQHDQALGESNNDNIQMEELAPVL 126
           K + R  YDV E E+E+++     +            QH+++L  SN  NI  +++    
Sbjct: 146 KTQSRELYDVPEHEDEVLSTDSEPY------------QHNESLNVSNTMNIGGDDI--FS 191

Query: 125 LNRDDLIPTEVDADVVLTNINRTQMDD 45
            +RDD+ P  +D   ++ +      DD
Sbjct: 192 WHRDDIPPISIDTSHLIHDEKAIPNDD 218


>gb|EEC84281.1| hypothetical protein OsI_30752 [Oryza sativa Indica Group]
          Length = 270

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 55/166 (33%), Positives = 86/166 (51%), Gaps = 6/166 (3%)
 Frame = -3

Query: 482 CDWWDVGNGRSGIQTDGHVTSVNVSRTWYKDDRFVLATQPGQVFYVSDTKLRGSWQVVQK 303
           CDW++      G++ DGH  S+N+   WYKDD F+LATQ  ++FY+ DT L   W++VQK
Sbjct: 108 CDWFNQVGKTRGVRDDGHFKSINIQSFWYKDDPFILATQSKKIFYLQDTSLGNEWRIVQK 167

Query: 302 IKPRNGYDVAEREEEIVAGHGVTFQEEEQDAVDGIVQHDQALGESNNDNIQMEELAPVLL 123
            + RN Y+V+E+++ I   H        QD      +H+   G ++ D   ++E   V +
Sbjct: 168 FEHRNMYNVSEKDDHIFDVH--------QDDNCSDTEHEVHEGNADEDLDHLQEDGEVTI 219

Query: 122 NRDDLIPTEVDADVVLTNINRTQMD-DHFIVDDESDE-----EDDM 3
              +L   +++    LT  +R   D D  I+   SD      EDDM
Sbjct: 220 IEANL--EDLNNQANLTEDSRDDADEDDTILQYCSDSGNGNAEDDM 263


>gb|ABA97336.1| transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa
            Japonica Group]
          Length = 1118

 Score = 89.7 bits (221), Expect = 3e-16
 Identities = 55/166 (33%), Positives = 86/166 (51%), Gaps = 6/166 (3%)
 Frame = -3

Query: 482  CDWWDVGNGRSGIQTDGHVTSVNVSRTWYKDDRFVLATQPGQVFYVSDTKLRGSWQVVQK 303
            CDW++      G++ DGH  S+N+   WYKDD F+LATQ  ++FY+ DT L   W++VQK
Sbjct: 956  CDWFNQVGKTRGVRDDGHFKSINIQSFWYKDDPFILATQSKKIFYLQDTSLGNEWRIVQK 1015

Query: 302  IKPRNGYDVAEREEEIVAGHGVTFQEEEQDAVDGIVQHDQALGESNNDNIQMEELAPVLL 123
             + RN Y+V+E+++ I   H        QD      +H+   G ++ D   ++E   V +
Sbjct: 1016 FEHRNMYNVSEKDDHIFDVH--------QDDNCSDTEHEVHEGNADEDLDHLQEDGEVTI 1067

Query: 122  NRDDLIPTEVDADVVLTNINRTQMD-DHFIVDDESD-----EEDDM 3
               +L   +++    LT  +R   D D  I+   SD      EDDM
Sbjct: 1068 IEANL--EDLNNQANLTEDSRDDADEDDTILQYCSDIGNGNAEDDM 1111


>gb|EEE62823.1| hypothetical protein OsJ_17626 [Oryza sativa Japonica Group]
          Length = 298

 Score = 89.7 bits (221), Expect = 3e-16
 Identities = 55/166 (33%), Positives = 86/166 (51%), Gaps = 6/166 (3%)
 Frame = -3

Query: 482 CDWWDVGNGRSGIQTDGHVTSVNVSRTWYKDDRFVLATQPGQVFYVSDTKLRGSWQVVQK 303
           CDW++      G++ DGH  S+N+   WYKDD F+LATQ  ++FY+ DT L   W++VQK
Sbjct: 136 CDWFNQVGKTRGVRDDGHFKSINIQSFWYKDDPFILATQSKKIFYLQDTSLGNEWRIVQK 195

Query: 302 IKPRNGYDVAEREEEIVAGHGVTFQEEEQDAVDGIVQHDQALGESNNDNIQMEELAPVLL 123
            + RN Y+V+E+++ I   H        QD      +H+   G ++ D   ++E   V +
Sbjct: 196 FEHRNMYNVSEKDDHIFDVH--------QDDNCSDTEHEVHEGNADEDLDHLQEDGEVTI 247

Query: 122 NRDDLIPTEVDADVVLTNINRTQMD-DHFIVDDESD-----EEDDM 3
              +L   +++    LT  +R   D D  I+   SD      EDDM
Sbjct: 248 IEANL--EDLNNQANLTEDSRDDADEDDTILQYCSDIGNGNAEDDM 291


>emb|CAN78763.1| hypothetical protein VITISV_003315 [Vitis vinifera]
          Length = 1226

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 51/160 (31%), Positives = 83/160 (51%), Gaps = 1/160 (0%)
 Frame = -3

Query: 482  CDWWDVGNGRSGIQTDGHVTSVNVSRTWYKDDRFVLATQPGQVFYVSDTKLRGSWQVVQK 303
            C+W+D    +  +Q DG +  +NV   WY++D +VLA+Q  Q+FYV+D KL  SW+VVQK
Sbjct: 787  CEWFDTDPNKKRLQDDGVLRCINVDNKWYEEDPYVLASQAQQIFYVNDPKLGSSWKVVQK 846

Query: 302  IKPRNGYDVAEREEEIVAGHGVTFQEEEQDAVDGIVQHDQALGESNNDNIQMEELAPVL- 126
            +  R+ +DV E+          T  + E D  D  ++      +S +    + +   VL 
Sbjct: 847  VLHRHIFDVPEQ---------TTTNDSENDNEDPTIEEXYQENDSTDIVWSVNQDCNVLQ 897

Query: 125  LNRDDLIPTEVDADVVLTNINRTQMDDHFIVDDESDEEDD 6
              R D  P+ +D + V  +  R + DD     ++ DEED+
Sbjct: 898  YQRADGDPSYIDIENVADHGRRFENDDLTAFINDQDEEDE 937


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