BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009240
         (1655 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544395.1| PREDICTED: probable pre-mRNA-splicing factor...   806   0.0  
ref|XP_003549455.1| PREDICTED: probable pre-mRNA-splicing factor...   806   0.0  
ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor...   806   0.0  
ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor...   806   0.0  
ref|XP_002510773.1| ATP-dependent RNA helicase, putative [Ricinu...   805   0.0  

>ref|XP_003544395.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like [Glycine max]
          Length = 1203

 Score =  806 bits (2083), Expect(2) = 0.0
 Identities = 405/419 (96%), Positives = 414/419 (98%)
 Frame = +1

Query: 1    PIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMS 180
            PIYKLKKEL+QAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMS
Sbjct: 551  PIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMS 610

Query: 181  VAKRVAEEFGCRLGEEVGYAIRFEDCTGPETVIKYMTDGMLLREILIDENLSQYSVIMLD 360
            VAKRVAEEFGCRLGEEVGYAIRFEDCTGP+TVIKYMTDGMLLREIL+DENLSQYSVIMLD
Sbjct: 611  VAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILVDENLSQYSVIMLD 670

Query: 361  EAHERTIHTDVLFGLLKQLVQRRPELRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVE 540
            EAHERTIHTDVLFGLLKQLV+RRPELRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVE
Sbjct: 671  EAHERTIHTDVLFGLLKQLVKRRPELRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVE 730

Query: 541  ILYTKQPESDYLDAALITVLQIHLTEPEGDILLFLTGQEEIDHACQSLYERMKGLGKSVP 720
            ILYTKQPESDYLDAALITVLQIHLTEPEGDILLFLTGQEEID ACQSLYERMKGLGK+VP
Sbjct: 731  ILYTKQPESDYLDAALITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVP 790

Query: 721  ELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVY 900
            ELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVY
Sbjct: 791  ELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVY 850

Query: 901  NPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSVPEIQRINL 1080
            NPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPT++PEIQRINL
Sbjct: 851  NPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINL 910

Query: 1081 GATTLQMKAMGINDLLSFDFMDPPSPLALITAMEQLYCLGALDDEGLLTKLGRKMAEFP 1257
            G TTL MKAMGINDLLSFDFMDPPSP ALI+AMEQLY LGALD+EGLLTKLGRKMAEFP
Sbjct: 911  GMTTLNMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFP 969



 Score =  186 bits (471), Expect(2) = 0.0
 Identities = 89/93 (95%), Positives = 92/93 (98%)
 Frame = +3

Query: 1377 TIIAMIQTGNIFYRPREKQAMADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENF 1556
            TIIAMIQTGNIFYRPREKQA ADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENF
Sbjct: 992  TIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENF 1051

Query: 1557 VQSRSLRRAQDVRKQLLTIMDRYKLDVLTAGKN 1655
            VQSRSLRRAQDVRKQLLTIMD+YKLDV++AGKN
Sbjct: 1052 VQSRSLRRAQDVRKQLLTIMDKYKLDVVSAGKN 1084


>ref|XP_003549455.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like [Glycine max]
          Length = 1197

 Score =  806 bits (2083), Expect(2) = 0.0
 Identities = 405/419 (96%), Positives = 414/419 (98%)
 Frame = +1

Query: 1    PIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMS 180
            PIYKLKKEL+QAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMS
Sbjct: 545  PIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMS 604

Query: 181  VAKRVAEEFGCRLGEEVGYAIRFEDCTGPETVIKYMTDGMLLREILIDENLSQYSVIMLD 360
            VAKRVAEEFGCRLGEEVGYAIRFEDCTGP+TVIKYMTDGMLLREIL+DENLSQYSVIMLD
Sbjct: 605  VAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILVDENLSQYSVIMLD 664

Query: 361  EAHERTIHTDVLFGLLKQLVQRRPELRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVE 540
            EAHERTIHTDVLFGLLKQLV+RRPELRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVE
Sbjct: 665  EAHERTIHTDVLFGLLKQLVKRRPELRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVE 724

Query: 541  ILYTKQPESDYLDAALITVLQIHLTEPEGDILLFLTGQEEIDHACQSLYERMKGLGKSVP 720
            ILYTKQPESDYLDAALITVLQIHLTEPEGDILLFLTGQEEID ACQSLYERMKGLGK+VP
Sbjct: 725  ILYTKQPESDYLDAALITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVP 784

Query: 721  ELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVY 900
            ELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVY
Sbjct: 785  ELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVY 844

Query: 901  NPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSVPEIQRINL 1080
            NPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPT++PEIQRINL
Sbjct: 845  NPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINL 904

Query: 1081 GATTLQMKAMGINDLLSFDFMDPPSPLALITAMEQLYCLGALDDEGLLTKLGRKMAEFP 1257
            G TTL MKAMGINDLLSFDFMDPPSP ALI+AMEQLY LGALD+EGLLTKLGRKMAEFP
Sbjct: 905  GMTTLNMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFP 963



 Score =  186 bits (471), Expect(2) = 0.0
 Identities = 89/93 (95%), Positives = 92/93 (98%)
 Frame = +3

Query: 1377 TIIAMIQTGNIFYRPREKQAMADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENF 1556
            TIIAMIQTGNIFYRPREKQA ADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENF
Sbjct: 986  TIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENF 1045

Query: 1557 VQSRSLRRAQDVRKQLLTIMDRYKLDVLTAGKN 1655
            VQSRSLRRAQDVRKQLLTIMD+YKLDV++AGKN
Sbjct: 1046 VQSRSLRRAQDVRKQLLTIMDKYKLDVVSAGKN 1078


>ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like isoform 2 [Vitis vinifera]
          Length = 1175

 Score =  806 bits (2083), Expect(2) = 0.0
 Identities = 406/419 (96%), Positives = 414/419 (98%)
 Frame = +1

Query: 1    PIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMS 180
            PIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMS
Sbjct: 523  PIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMS 582

Query: 181  VAKRVAEEFGCRLGEEVGYAIRFEDCTGPETVIKYMTDGMLLREILIDENLSQYSVIMLD 360
            VAKRVAEEFGCRLGEEVGYAIRFEDCTGP+TVIKYMTDGMLLREILID+NLSQYSVIMLD
Sbjct: 583  VAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLD 642

Query: 361  EAHERTIHTDVLFGLLKQLVQRRPELRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVE 540
            EAHERTIHTDVLFGLLK LV+RRP+LRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVE
Sbjct: 643  EAHERTIHTDVLFGLLKHLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVE 702

Query: 541  ILYTKQPESDYLDAALITVLQIHLTEPEGDILLFLTGQEEIDHACQSLYERMKGLGKSVP 720
            ILYTKQPESDYLDA+LITVLQIHLTEPEGDILLFLTGQEEIDHACQSLYERMKGLGK+VP
Sbjct: 703  ILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDHACQSLYERMKGLGKNVP 762

Query: 721  ELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVY 900
            ELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVY
Sbjct: 763  ELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVY 822

Query: 901  NPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSVPEIQRINL 1080
            NPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSVPEIQRINL
Sbjct: 823  NPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSVPEIQRINL 882

Query: 1081 GATTLQMKAMGINDLLSFDFMDPPSPLALITAMEQLYCLGALDDEGLLTKLGRKMAEFP 1257
            G TTL MKAMGINDLLSFDFMDPPSP ALI+AMEQLY LGALD+EGLLTKLGRKMAEFP
Sbjct: 883  GLTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFP 941



 Score =  186 bits (471), Expect(2) = 0.0
 Identities = 89/93 (95%), Positives = 92/93 (98%)
 Frame = +3

Query: 1377 TIIAMIQTGNIFYRPREKQAMADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENF 1556
            TIIAMIQTGNIFYRPREKQA ADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENF
Sbjct: 964  TIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENF 1023

Query: 1557 VQSRSLRRAQDVRKQLLTIMDRYKLDVLTAGKN 1655
            VQSRSLRRAQDVRKQLLTIMD+YKLDV++AGKN
Sbjct: 1024 VQSRSLRRAQDVRKQLLTIMDKYKLDVVSAGKN 1056


>ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like [Vitis vinifera]
          Length = 1172

 Score =  806 bits (2083), Expect(2) = 0.0
 Identities = 406/419 (96%), Positives = 414/419 (98%)
 Frame = +1

Query: 1    PIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMS 180
            PIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMS
Sbjct: 520  PIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMS 579

Query: 181  VAKRVAEEFGCRLGEEVGYAIRFEDCTGPETVIKYMTDGMLLREILIDENLSQYSVIMLD 360
            VAKRVAEEFGCRLGEEVGYAIRFEDCTGP+TVIKYMTDGMLLREILID+NLSQYSVIMLD
Sbjct: 580  VAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLD 639

Query: 361  EAHERTIHTDVLFGLLKQLVQRRPELRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVE 540
            EAHERTIHTDVLFGLLK LV+RRP+LRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVE
Sbjct: 640  EAHERTIHTDVLFGLLKHLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVE 699

Query: 541  ILYTKQPESDYLDAALITVLQIHLTEPEGDILLFLTGQEEIDHACQSLYERMKGLGKSVP 720
            ILYTKQPESDYLDA+LITVLQIHLTEPEGDILLFLTGQEEIDHACQSLYERMKGLGK+VP
Sbjct: 700  ILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDHACQSLYERMKGLGKNVP 759

Query: 721  ELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVY 900
            ELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVY
Sbjct: 760  ELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVY 819

Query: 901  NPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSVPEIQRINL 1080
            NPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSVPEIQRINL
Sbjct: 820  NPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSVPEIQRINL 879

Query: 1081 GATTLQMKAMGINDLLSFDFMDPPSPLALITAMEQLYCLGALDDEGLLTKLGRKMAEFP 1257
            G TTL MKAMGINDLLSFDFMDPPSP ALI+AMEQLY LGALD+EGLLTKLGRKMAEFP
Sbjct: 880  GLTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFP 938



 Score =  186 bits (471), Expect(2) = 0.0
 Identities = 89/93 (95%), Positives = 92/93 (98%)
 Frame = +3

Query: 1377 TIIAMIQTGNIFYRPREKQAMADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENF 1556
            TIIAMIQTGNIFYRPREKQA ADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENF
Sbjct: 961  TIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENF 1020

Query: 1557 VQSRSLRRAQDVRKQLLTIMDRYKLDVLTAGKN 1655
            VQSRSLRRAQDVRKQLLTIMD+YKLDV++AGKN
Sbjct: 1021 VQSRSLRRAQDVRKQLLTIMDKYKLDVVSAGKN 1053


>ref|XP_002510773.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223551474|gb|EEF52960.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 1177

 Score =  805 bits (2078), Expect(2) = 0.0
 Identities = 405/419 (96%), Positives = 414/419 (98%)
 Frame = +1

Query: 1    PIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMS 180
            PIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMS
Sbjct: 525  PIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMS 584

Query: 181  VAKRVAEEFGCRLGEEVGYAIRFEDCTGPETVIKYMTDGMLLREILIDENLSQYSVIMLD 360
            VAKRVAEEFGCRLGEEVGYAIRFEDCTGP+TVIKYMTDGMLLREILIDENLSQYSVIMLD
Sbjct: 585  VAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLD 644

Query: 361  EAHERTIHTDVLFGLLKQLVQRRPELRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVE 540
            EAHERTIHTDVLFGLLKQLV+RRP+LRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVE
Sbjct: 645  EAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVE 704

Query: 541  ILYTKQPESDYLDAALITVLQIHLTEPEGDILLFLTGQEEIDHACQSLYERMKGLGKSVP 720
            ILYTKQPESDYLDAALITVLQIHLTEPEGD+LLFLTGQEEID ACQSLYERMKGLGK+VP
Sbjct: 705  ILYTKQPESDYLDAALITVLQIHLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVP 764

Query: 721  ELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVY 900
            ELIILPVYSALPSEMQSRIF+PAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVY
Sbjct: 765  ELIILPVYSALPSEMQSRIFEPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVY 824

Query: 901  NPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSVPEIQRINL 1080
            NPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTS+PEIQRINL
Sbjct: 825  NPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINL 884

Query: 1081 GATTLQMKAMGINDLLSFDFMDPPSPLALITAMEQLYCLGALDDEGLLTKLGRKMAEFP 1257
            G TTL MKAMGINDLLSFDFMDPPSP ALI+AMEQLY LGALD+EGLLTKLGRKMAEFP
Sbjct: 885  GFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFP 943



 Score =  184 bits (467), Expect(2) = 0.0
 Identities = 88/93 (94%), Positives = 92/93 (98%)
 Frame = +3

Query: 1377 TIIAMIQTGNIFYRPREKQAMADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENF 1556
            TIIAMIQTGNIFYRPREKQA ADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENF
Sbjct: 966  TIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENF 1025

Query: 1557 VQSRSLRRAQDVRKQLLTIMDRYKLDVLTAGKN 1655
            VQSRSLRRAQDVRKQLL+IMD+YKLDV++AGKN
Sbjct: 1026 VQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKN 1058