BLASTX nr result

ID: Coptis23_contig00009221 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009221
         (937 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276238.2| PREDICTED: uncharacterized protein LOC100251...    98   2e-26
emb|CBI36522.3| unnamed protein product [Vitis vinifera]               98   2e-26
emb|CAN75318.1| hypothetical protein VITISV_026156 [Vitis vinifera]    98   2e-26
ref|XP_002523498.1| ATP binding protein, putative [Ricinus commu...    96   6e-25
ref|XP_004146694.1| PREDICTED: uncharacterized protein LOC101212...   100   9e-24

>ref|XP_002276238.2| PREDICTED: uncharacterized protein LOC100251960 [Vitis vinifera]
          Length = 1417

 Score = 97.8 bits (242), Expect(2) = 2e-26
 Identities = 52/110 (47%), Positives = 61/110 (55%)
 Frame = -1

Query: 853 LVIVANGDHQQQTNEEQEWRDDATQGGDGERKEAGENGKANGGVVSTGGTRIGYNNHMYH 674
           LVIVA+GD      EEQEW +D     DGERKE  +  K NG +   G  +IGY++H YH
Sbjct: 264 LVIVADGDQTHPPLEEQEWGEDTAV--DGERKEGADAAKVNGAIA--GPPKIGYSSHGYH 319

Query: 673 PHHSQFKYXXXXXXXXXXXXXXXXXXXPSQVCPPINVGPIGGRGRGDWRP 524
           P HSQFKY                   P QV P  N+GP+ GRGRGDWRP
Sbjct: 320 PFHSQFKYVRPGAAPIPGAAAVVPGGTPGQVRPLANIGPVPGRGRGDWRP 369



 Score = 48.5 bits (114), Expect(2) = 2e-26
 Identities = 25/41 (60%), Positives = 25/41 (60%), Gaps = 5/41 (12%)
 Frame = -2

Query: 513 IKIYPGMQKPFHS-----AWPNTSAGRGFGSGFEFTLPPHK 406
           IK  P MQK FHS     AW    AGRGFG G EFTLP HK
Sbjct: 372 IKNAPPMQKNFHSGFGAPAWGGNMAGRGFGGGLEFTLPSHK 412


>emb|CBI36522.3| unnamed protein product [Vitis vinifera]
          Length = 824

 Score = 97.8 bits (242), Expect(2) = 2e-26
 Identities = 52/110 (47%), Positives = 61/110 (55%)
 Frame = -1

Query: 853 LVIVANGDHQQQTNEEQEWRDDATQGGDGERKEAGENGKANGGVVSTGGTRIGYNNHMYH 674
           LVIVA+GD      EEQEW +D     DGERKE  +  K NG +   G  +IGY++H YH
Sbjct: 195 LVIVADGDQTHPPLEEQEWGEDTAV--DGERKEGADAAKVNGAIA--GPPKIGYSSHGYH 250

Query: 673 PHHSQFKYXXXXXXXXXXXXXXXXXXXPSQVCPPINVGPIGGRGRGDWRP 524
           P HSQFKY                   P QV P  N+GP+ GRGRGDWRP
Sbjct: 251 PFHSQFKYVRPGAAPIPGAAAVVPGGTPGQVRPLANIGPVPGRGRGDWRP 300



 Score = 48.5 bits (114), Expect(2) = 2e-26
 Identities = 25/41 (60%), Positives = 25/41 (60%), Gaps = 5/41 (12%)
 Frame = -2

Query: 513 IKIYPGMQKPFHS-----AWPNTSAGRGFGSGFEFTLPPHK 406
           IK  P MQK FHS     AW    AGRGFG G EFTLP HK
Sbjct: 303 IKNAPPMQKNFHSGFGAPAWGGNMAGRGFGGGLEFTLPSHK 343


>emb|CAN75318.1| hypothetical protein VITISV_026156 [Vitis vinifera]
          Length = 362

 Score = 97.8 bits (242), Expect(2) = 2e-26
 Identities = 52/110 (47%), Positives = 61/110 (55%)
 Frame = -1

Query: 853 LVIVANGDHQQQTNEEQEWRDDATQGGDGERKEAGENGKANGGVVSTGGTRIGYNNHMYH 674
           LVIVA+GD      EEQEW +D     DGERKE  +  K NG +   G  +IGY++H YH
Sbjct: 214 LVIVADGDQTHPPLEEQEWGEDTAV--DGERKEGADAAKVNGAIA--GPPKIGYSSHGYH 269

Query: 673 PHHSQFKYXXXXXXXXXXXXXXXXXXXPSQVCPPINVGPIGGRGRGDWRP 524
           P HSQFKY                   P QV P  N+GP+ GRGRGDWRP
Sbjct: 270 PFHSQFKYVRPGAAPIPGAAAVVPGGTPGQVRPLANIGPVPGRGRGDWRP 319



 Score = 48.5 bits (114), Expect(2) = 2e-26
 Identities = 25/41 (60%), Positives = 25/41 (60%), Gaps = 5/41 (12%)
 Frame = -2

Query: 513 IKIYPGMQKPFHS-----AWPNTSAGRGFGSGFEFTLPPHK 406
           IK  P MQK FHS     AW    AGRGFG G EFTLP HK
Sbjct: 322 IKNAPPMQKNFHSGFGAPAWGGNMAGRGFGGGLEFTLPSHK 362


>ref|XP_002523498.1| ATP binding protein, putative [Ricinus communis]
           gi|223537205|gb|EEF38837.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 1365

 Score = 95.9 bits (237), Expect(2) = 6e-25
 Identities = 57/117 (48%), Positives = 64/117 (54%), Gaps = 7/117 (5%)
 Frame = -1

Query: 853 LVIVANGDHQQQTNEEQEWRD-----DATQGGDGERKEAG-ENGKANGGVVSTGGTRIGY 692
           LVIVA+GD  Q   EEQ+W        A  G +GERKE G E     GG V   G +IGY
Sbjct: 209 LVIVADGDANQAMMEEQDWGSVGEDAAAATGAEGERKEGGGETAGGKGGNV-IAGPKIGY 267

Query: 691 NNHMYH-PHHSQFKYXXXXXXXXXXXXXXXXXXXPSQVCPPINVGPIGGRGRGDWRP 524
           +NH+YH P HSQFKY                   P QV PPIN+ PI GRGRGDWRP
Sbjct: 268 SNHVYHHPFHSQFKYVRPGAAPIPGATTAGPGGAPGQVRPPINMAPIAGRGRGDWRP 324



 Score = 45.1 bits (105), Expect(2) = 6e-25
 Identities = 21/36 (58%), Positives = 22/36 (61%), Gaps = 4/36 (11%)
 Frame = -2

Query: 501 PGMQKPFHSA----WPNTSAGRGFGSGFEFTLPPHK 406
           P MQK +H      W N  AGRGFG G EFTLP HK
Sbjct: 331 PPMQKGYHPGFGMPWGNNMAGRGFGGGLEFTLPSHK 366


>ref|XP_004146694.1| PREDICTED: uncharacterized protein LOC101212971 [Cucumis sativus]
          Length = 1399

 Score =  100 bits (250), Expect(2) = 9e-24
 Identities = 52/111 (46%), Positives = 66/111 (59%)
 Frame = -1

Query: 853 LVIVANGDHQQQTNEEQEWRDDATQGGDGERKEAGENGKANGGVVSTGGTRIGYNNHMYH 674
           LVI+ + D Q Q  EEQEW DD     DGERKE GE  K++ G+V     ++GY+N+ Y 
Sbjct: 248 LVILGDND-QNQVMEEQEWGDDTVPTADGERKETGEAAKSSAGMVV--APKLGYSNYGYR 304

Query: 673 PHHSQFKYXXXXXXXXXXXXXXXXXXXPSQVCPPINVGPIGGRGRGDWRPT 521
           P HSQ+KY                   P+QV P +N+GP+GGRGRGDWRPT
Sbjct: 305 PFHSQYKYVRPGAAPFPGTSASGPGGTPTQVRPLVNMGPVGGRGRGDWRPT 355



 Score = 36.2 bits (82), Expect(2) = 9e-24
 Identities = 19/35 (54%), Positives = 20/35 (57%), Gaps = 5/35 (14%)
 Frame = -2

Query: 495 MQKPFHSA-----WPNTSAGRGFGSGFEFTLPPHK 406
           +QK FHS      W N   GR FG G EFTLP HK
Sbjct: 363 VQKGFHSGFGMPGWSNNMGGRSFG-GLEFTLPSHK 396


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