BLASTX nr result

ID: Coptis23_contig00009220 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009220
         (1710 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268359.2| PREDICTED: transcription factor bHLH111 [Vit...   440   e-121
emb|CAN73367.1| hypothetical protein VITISV_032596 [Vitis vinifera]   377   e-102
ref|XP_002521874.1| hypothetical protein RCOM_0775400 [Ricinus c...   358   2e-96
ref|XP_003535513.1| PREDICTED: transcription factor bHLH111-like...   351   3e-94
ref|XP_004140441.1| PREDICTED: transcription factor bHLH111-like...   263   1e-67

>ref|XP_002268359.2| PREDICTED: transcription factor bHLH111 [Vitis vinifera]
            gi|297738310|emb|CBI27511.3| unnamed protein product
            [Vitis vinifera]
          Length = 508

 Score =  440 bits (1132), Expect = e-121
 Identities = 265/497 (53%), Positives = 314/497 (63%), Gaps = 23/497 (4%)
 Frame = +1

Query: 82   WELHGNSL--SSWNNGIPWHXXXXXXXXXCEEDXXXXXXXXXXXXXXGLSTDESSRQLTQ 255
            W+LHG+S   S +N+  PW          CEE+              GL T ESSR+L +
Sbjct: 20   WDLHGSSTLSSCYNSTNPWSQPNPNSNSSCEEEVSISTSFTNASNHSGL-TVESSRRLIE 78

Query: 256  PPSSDG-LTGERAA-DSHLWSKVLLSVGSCSGGLHHNQDVGENFLETLSSKNLPAELFEP 429
            P SS   L GE AA DSHLWS VLL+VGS +G LH +QDVGEN L+ LSSK+L   +FEP
Sbjct: 79   PASSTNELIGEPAASDSHLWSHVLLNVGS-NGDLHGSQDVGENLLDALSSKSLSTGIFEP 137

Query: 430  AAFDYLTRMDNGWELATSTSYNNIARQXXXXXXXXXXXXXVT-------DWSIAPPCPEV 588
            A  DYL +MDN WE   STS++N  +              +T       +WSIAPP PEV
Sbjct: 138  AC-DYLKKMDNSWEFTNSTSFSNFDKHFNGFSENFIGSERLTKLSDLVSNWSIAPPDPEV 196

Query: 589  DHQITQPPVCNMSRDSMH--QHSEPDLSQ-----NLSNSTMYGVADSSSFLPCYAHEMKV 747
            +HQ   P +CNMS  S    Q+S+PDL       N S S   G + +S  L CY H+ KV
Sbjct: 197  NHQF-DPQICNMSLSSPMDIQYSQPDLCHMKLTFNESASCGMGASRNSGLLSCYRHDQKV 255

Query: 748  ESQHQQIEDSEA-LLHXXXXXXXXXYPMGHNSPTVMGYNDKYYYGMSEAPWFT-RNLADV 921
            E+ H +I  S   LL          Y  G N  +++G N KYYYG+        RN ADV
Sbjct: 256  ENDHHEIGSSPGPLLRRPCQSNGIGYQFGLNG-SIVGDNGKYYYGIPNTTCSNPRNFADV 314

Query: 922  ISFNGCINKPMVDPQSSRHCLKAASTAPDSKKQNVVSLAPASRSARGTGVVTEGKRKRSE 1101
            ISF+  + KP+VD + S+ CLK  S + D KKQ + + + A  +ARG G+  EGK+KRS+
Sbjct: 315  ISFSSRLCKPLVDSRESKPCLKPLSLS-DCKKQGLQTSSQARNNARGQGISNEGKKKRSD 373

Query: 1102 -DTSEAQ--FKKPKHEASTGSSVKVQPPKVKWGDRITTLQQIVSPFGKTDTASVLQEAIG 1272
             DTSEAQ   KKPK E+S  SSVK+Q PKVK GDRIT LQQIVSPFGKTDTASVL EAIG
Sbjct: 374  QDTSEAQTVMKKPKQESSAVSSVKMQAPKVKIGDRITALQQIVSPFGKTDTASVLYEAIG 433

Query: 1273 YIKFLQEQVQLLSNPYMKANANKDPWGMLERKGKAELKFDLKSRGLCLVPISCTPQVYRE 1452
            YIKFLQEQVQLLSNPYMK   NKDPWG L+RK K +LK DLKSRGLCLVPISCTPQVY E
Sbjct: 434  YIKFLQEQVQLLSNPYMK--TNKDPWGGLDRKDKGDLKLDLKSRGLCLVPISCTPQVYHE 491

Query: 1453 NTGSDYWTPTYRGCLYR 1503
            NTGSDYW  TYRGCLYR
Sbjct: 492  NTGSDYWPTTYRGCLYR 508


>emb|CAN73367.1| hypothetical protein VITISV_032596 [Vitis vinifera]
          Length = 545

 Score =  377 bits (968), Expect = e-102
 Identities = 237/465 (50%), Positives = 286/465 (61%), Gaps = 23/465 (4%)
 Frame = +1

Query: 82   WELHGNSL--SSWNNGIPWHXXXXXXXXXCEEDXXXXXXXXXXXXXXGLSTDESSRQLTQ 255
            W+LHG+S   S +N+  PW          CEE+              GL T ESSR+L +
Sbjct: 20   WDLHGSSTLSSCYNSTNPWSQPNPNSNSSCEEEVSISTSFTNASNHSGL-TVESSRRLIE 78

Query: 256  PPSSDG-LTGERAA-DSHLWSKVLLSVGSCSGGLHHNQDVGENFLETLSSKNLPAELFEP 429
            P SS   L GE AA DSHLWS VLL+VGS +G LH +QDVGEN L+ LSSK+L   +FEP
Sbjct: 79   PASSTNELIGEPAASDSHLWSHVLLNVGS-NGDLHGSQDVGENLLDALSSKSLSTGIFEP 137

Query: 430  AAFDYLTRMDNGWELATSTSYNNIARQXXXXXXXXXXXXXVT-------DWSIAPPCPEV 588
            A  DYL +MDN WE   STS++N  +              +T       +WSIAPP PEV
Sbjct: 138  AC-DYLKKMDNSWEFTNSTSFSNFDKHFNGFSENFIGSERLTKLSDLVSNWSIAPPDPEV 196

Query: 589  DHQITQPPVCNMSRDSMH--QHSEPDLSQ-----NLSNSTMYGVADSSSFLPCYAHEMKV 747
            +HQ   P +CNMS  S    Q+S+PDL       N S S   G + +S  L CY H+ KV
Sbjct: 197  NHQF-DPQICNMSLSSPMDIQYSQPDLCHMKLTFNESASRGMGASRNSGLLSCYRHDQKV 255

Query: 748  ESQHQQIEDSEA-LLHXXXXXXXXXYPMGHNSPTVMGYNDKYYYGMSEAPWFT-RNLADV 921
            E+ H +I  S   LL          Y  G N  +++G N KYYYG+        RN ADV
Sbjct: 256  ENDHHEIGSSPGPLLRRPCQSNGIGYQFGLNG-SIVGDNGKYYYGIPNTTCSNPRNFADV 314

Query: 922  ISFNGCINKPMVDPQSSRHCLKAASTAPDSKKQNVVSLAPASRSARGTGVVTEGKRKRSE 1101
            ISF+  + KP+VD + S+ CLK  S + D KKQ + + + A  +ARG G+  EGK+KRS+
Sbjct: 315  ISFSSRLCKPLVDSRESKPCLKPLSLS-DCKKQGLQTSSQARNNARGQGISNEGKKKRSD 373

Query: 1102 -DTSEAQ--FKKPKHEASTGSSVKVQPPKVKWGDRITTLQQIVSPFGKTDTASVLQEAIG 1272
             DTSEAQ   KKPK E+ST SSVK+Q PKVK GDRIT LQQIVSPFGKTDTASVL EAIG
Sbjct: 374  QDTSEAQTVMKKPKQESSTVSSVKMQAPKVKIGDRITALQQIVSPFGKTDTASVLYEAIG 433

Query: 1273 YIKFLQEQVQLLSNPYMKANANKDPWGMLERKGKAELKFDLKSRG 1407
            YIKFLQEQVQLLSNPYMK   NKDPWG L+RK K +LK DLKSRG
Sbjct: 434  YIKFLQEQVQLLSNPYMK--TNKDPWGGLDRKDKGDLKLDLKSRG 476


>ref|XP_002521874.1| hypothetical protein RCOM_0775400 [Ricinus communis]
            gi|223538912|gb|EEF40510.1| hypothetical protein
            RCOM_0775400 [Ricinus communis]
          Length = 446

 Score =  358 bits (919), Expect = 2e-96
 Identities = 218/480 (45%), Positives = 281/480 (58%), Gaps = 6/480 (1%)
 Frame = +1

Query: 82   WELHGNSLSSWNNGIPWHXXXXXXXXXCEEDXXXXXXXXXXXXXXGLSTDESSRQLTQPP 261
            W+LH +  SS +   PWH         CEED              GL T ESSR+L +P 
Sbjct: 24   WDLHHHHASSLS---PWHQPNPSSNSSCEEDVSMSTSFTNASNHSGL-TVESSRRLVEPA 79

Query: 262  SS--DGLTGERAADSHLWSKVLLSVGSCSGGLHHNQDVGENFLETLSSKNLPAE-LFEPA 432
            +S  + L GE A+DS LWS +LL VGS +G L +NQDVGEN L+ LSS+++ +  +FEPA
Sbjct: 80   ASSPNELIGEHASDSQLWSHILLGVGS-NGELQNNQDVGENLLDALSSRSINSSGIFEPA 138

Query: 433  AFDYLTRMDNGWELATSTSYNNIARQXXXXXXXXXXXXXVTDWSIAPPCPEVDHQITQPP 612
              DYL ++D+ WE   ++S+NN  +              +          E D ++T+  
Sbjct: 139  C-DYLKKIDHNWEF--TSSFNNFEKHINGFSTDHHHQSLI----------ESDQRVTK-- 183

Query: 613  VCNMSRDSMHQHSEPDLSQNLSNSTMYGVADSSSFLPCYAHEMKVESQHQQIEDSEALLH 792
                            LS  + N                 HE +   +H +   +  +L 
Sbjct: 184  ----------------LSNLVEND----------------HEHQNHHRHVEAPAAGYVLR 211

Query: 793  XXXXXXXXX---YPMGHNSPTVMGYNDKYYYGMSEAPWFTRNLADVISFNGCINKPMVDP 963
                        Y +G N+ +VM  N KYYYG +E     R   D ++FNG +NKP++D 
Sbjct: 212  RSTFNNNGAGVGYHIGLNNGSVMADNSKYYYGTTENT-SARTFNDGLTFNGRLNKPLIDI 270

Query: 964  QSSRHCLKAASTAPDSKKQNVVSLAPASRSARGTGVVTEGKRKRSEDTSEAQFKKPKHEA 1143
            Q  + C K+ + + D +KQ    L  +S++ RG G  +EGK+KR EDTSE   KKPKHE+
Sbjct: 271  QGHKPCFKSLNLS-DCRKQG---LQASSQTVRGQGNSSEGKKKRYEDTSETIPKKPKHES 326

Query: 1144 STGSSVKVQPPKVKWGDRITTLQQIVSPFGKTDTASVLQEAIGYIKFLQEQVQLLSNPYM 1323
            ST SSVK Q PKVK GDRIT LQQIVSPFGKTDTASVL EAI YIKFLQEQVQLLSNPYM
Sbjct: 327  STASSVKTQAPKVKLGDRITALQQIVSPFGKTDTASVLLEAIQYIKFLQEQVQLLSNPYM 386

Query: 1324 KANANKDPWGMLERKGKAELKFDLKSRGLCLVPISCTPQVYRENTGSDYWTPTYRGCLYR 1503
            K+N++KDPWG L++K + + K DL+SRGLCLVPISCTPQ+Y ENTGSDYWTPTYRGCLYR
Sbjct: 387  KSNSHKDPWGGLDKKAQGDAKVDLRSRGLCLVPISCTPQIYHENTGSDYWTPTYRGCLYR 446


>ref|XP_003535513.1| PREDICTED: transcription factor bHLH111-like [Glycine max]
          Length = 502

 Score =  351 bits (901), Expect = 3e-94
 Identities = 218/491 (44%), Positives = 281/491 (57%), Gaps = 17/491 (3%)
 Frame = +1

Query: 82   WELHGNSLSSWNN-GIPW-HXXXXXXXXXCEEDXXXXXXXXXXXXXXGLSTDESSRQLTQ 255
            W L  NSLSSWN+    W +         CEED               L T ESSR+L +
Sbjct: 20   WYLQANSLSSWNDTNSTWSNQPNPNSSSSCEEDISVSTSFTNASNHSSL-TVESSRRLIE 78

Query: 256  PP--SSDGLTGERAADSHLWSKVLLSVGSCSGGLHHNQDVGENFLETLSSKNLPAELFEP 429
            PP  SS  L GE A+D+ LWS VL  VGS  G LH++Q++GENFL+ LSSK++ + +F+P
Sbjct: 79   PPAPSSTELMGEHASDNQLWSHVLSGVGS-DGELHNSQEIGENFLDALSSKSMTSTMFQP 137

Query: 430  AAFDYLTRMDN-GWELATSTSYNNIARQXXXXXXXXXXXXX--------VTDWSIAPPCP 582
               DYL ++D+  WE   STS N+  +                      V+ WSIAPP P
Sbjct: 138  VC-DYLKKLDHTSWEYNGSTSLNSFEKHLNGFSEAMLENNERLTKLSNLVSTWSIAPPDP 196

Query: 583  EVDHQITQPPVCNMSRDSMHQHSEPDLSQNLSNSTMYGVADSSSFLPCYAHEMKVESQHQ 762
            EV          NMS  S          ++          +S  F  CY H+MKV+ ++ 
Sbjct: 197  EVSSHFDPQKTNNMSLSSNSMDHHFPQFEHFKQPFEEASRNSGVFPNCYDHDMKVKQEYH 256

Query: 763  QIEDSEALLHXXXXXXXXXYPMGHNSPTVMGYNDKYYYGMSEAPWFTRNLADVISFNGCI 942
              E S   +          Y  G NS +V+  + K Y+ M      TRN +DVISFN  +
Sbjct: 257  ASEVSPGSVFGKPLNANG-YRNGFNSLSVVD-SCKLYHDMPNISSCTRNFSDVISFNSRL 314

Query: 943  NKPMVDPQSSRHCLKAASTAPDSKKQNVVSLAPASRS---ARGTGVVTEGKRKRSEDTSE 1113
              P++     +  +K  + + + KKQ + + +P  R+    +G G   E K+KRSE++S+
Sbjct: 315  GWPVIGVHGQKPSMKYLNVS-EPKKQGLQTPSPPIRTNVNGKGEGTTREVKKKRSEESSD 373

Query: 1114 AQFKKPKHEASTGSSVKVQPPKVKWGDRITTLQQIVSPFGKTDTASVLQEAIGYIKFLQE 1293
            A  KKPK + ST SS K   PKVK GD+IT LQQIVSPFGKTDTASVL EAIGYIKFLQE
Sbjct: 374  AMLKKPKQDTSTASSSKA--PKVKLGDKITALQQIVSPFGKTDTASVLFEAIGYIKFLQE 431

Query: 1294 QVQLLSNPYMKANANKDPWGMLERKG-KAELKFDLKSRGLCLVPISCTPQVYRENTGSDY 1470
            QVQLLSNP++KAN++KDPWG L+RK  K + K DL+SRGLCLVP SCTP VYRE++G DY
Sbjct: 432  QVQLLSNPFLKANSHKDPWGSLDRKDHKEDTKLDLRSRGLCLVPTSCTPLVYRESSGPDY 491

Query: 1471 WTPTYRGCLYR 1503
            WTP YRGCLYR
Sbjct: 492  WTPAYRGCLYR 502


>ref|XP_004140441.1| PREDICTED: transcription factor bHLH111-like [Cucumis sativus]
            gi|449518025|ref|XP_004166044.1| PREDICTED: transcription
            factor bHLH111-like [Cucumis sativus]
          Length = 450

 Score =  263 bits (671), Expect = 1e-67
 Identities = 180/427 (42%), Positives = 228/427 (53%), Gaps = 24/427 (5%)
 Frame = +1

Query: 295  DSHLWSKVLLSVGSCSGGLHHNQDVGENFLETLSSKNLPAE--LFEPAAF-DYLTRMD-- 459
            ++HLW++VLL++G+      + +++  NFLET+SS++  +   +FE  A  DYL +MD  
Sbjct: 80   NNHLWTQVLLNIGNDVELESNEENIEGNFLETISSRSSMSTTGIFESTACSDYLKKMDTS 139

Query: 460  ----NGWE---LATSTSYNNIAR------QXXXXXXXXXXXXXVTDWSIAPPCPEVDHQI 600
                N W+      +T+ NN  R                    V  WSIA P P+     
Sbjct: 140  NNDNNNWDDTFQTFNTNNNNNNRLLTSHTHMLQNERFLKLSNLVNRWSIALPNPD----- 194

Query: 601  TQPPVCNMSRDSMHQHSEPDLSQNLSNSTMYGVADSSSFLPCYAHEMKVESQHQQIEDSE 780
              P + +++ D  H H               G        PC +  ++   Q+Q      
Sbjct: 195  --PHLRHLTMDDQHDHLRASTMPTHEILEPDGTMPHQGLDPCDSSFLRRSLQNQ------ 246

Query: 781  ALLHXXXXXXXXXYPMGHNSPTVMGYNDKYYYGMSEAPWFTRNLADVISFNGCINKPMV- 957
                                                      N  D ISFNG + KP+V 
Sbjct: 247  ------------------------------------------NYGDYISFNGRLAKPVVG 264

Query: 958  -DPQSSRHCLKAA-STAPDSKKQNVVSLAPASRSARGTGVVT-EGKRKRSEDTS-EAQFK 1125
             +  S+  C K++ + + DSKKQ     +P   S RG+G V+ EGK+KRSE++S E   K
Sbjct: 265  INGSSNNPCFKSSLNLSADSKKQIHQICSPTRISGRGSGGVSNEGKKKRSEESSSETSTK 324

Query: 1126 KPKHEASTGSSVKVQPPKVKWGDRITTLQQIVSPFGKTDTASVLQEAIGYIKFLQEQVQL 1305
            K K + ST SS K+Q PKVK GDRIT LQQIVSPFGKTDTASVL E IGYIKFLQEQVQL
Sbjct: 325  KAKQDNSTPSSNKIQQPKVKIGDRITALQQIVSPFGKTDTASVLTETIGYIKFLQEQVQL 384

Query: 1306 LSNPYMKANANKDPWGMLERK-GKAELKFDLKSRGLCLVPISCTPQVYRENTGSDYWTPT 1482
            LSNPYMK N+ KDPW  LERK GK + K DL+SRGLCLVPISCTPQVYRENTGSDYWTP 
Sbjct: 385  LSNPYMKTNSYKDPWQSLERKEGKGDGKMDLRSRGLCLVPISCTPQVYRENTGSDYWTP- 443

Query: 1483 YRGCLYR 1503
            YRGC YR
Sbjct: 444  YRGCFYR 450


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