BLASTX nr result

ID: Coptis23_contig00009199 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009199
         (1495 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271592.1| PREDICTED: heterogeneous nuclear ribonucleop...   337   6e-90
emb|CBI39777.3| unnamed protein product [Vitis vinifera]              333   9e-89
ref|XP_003542187.1| PREDICTED: DAZ-associated protein 1-like [Gl...   325   1e-86
emb|CBI18525.3| unnamed protein product [Vitis vinifera]              324   3e-86
ref|XP_002277226.1| PREDICTED: RNA-binding protein Musashi homol...   324   3e-86

>ref|XP_002271592.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C [Vitis
            vinifera] gi|147768836|emb|CAN78130.1| hypothetical
            protein VITISV_036088 [Vitis vinifera]
          Length = 348

 Score =  337 bits (863), Expect = 6e-90
 Identities = 182/280 (65%), Positives = 198/280 (70%), Gaps = 5/280 (1%)
 Frame = -1

Query: 1327 MGSKTKSFDN----EKASPGKIFIGGLAKDTTLATFTNYFEKYGGITDSVIMKDRYTGHP 1160
            MGSK+KS DN    + ASPGKIFIGGLAKDTT ATF  +F KYG ITDSVIMKDRYTG P
Sbjct: 1    MGSKSKS-DNPHTGDGASPGKIFIGGLAKDTTYATFNKHFGKYGDITDSVIMKDRYTGQP 59

Query: 1159 RGFGFITYADPSVVDIVIEETHVINGKQVEIKRTIPKGSSQSKDFKTKKIFVGGVPTTVT 980
            RGFGFITYADPSVVD VIE+THVINGKQVEIKRTIPKGS QSKDFKTKKIFVGGVP+TVT
Sbjct: 60   RGFGFITYADPSVVDRVIEDTHVINGKQVEIKRTIPKGSGQSKDFKTKKIFVGGVPSTVT 119

Query: 979  EDEFKNFFSKYGNVAEHQIIRDHTTNRSRGFGFIVYDNEQVVDDILVNGNMIDMDGTQVE 800
            EDEFKNFFSKYG V EHQIIRDH TNRSRGFGFI++D+E+VVD+++  GNMIDM GTQVE
Sbjct: 120  EDEFKNFFSKYGKVVEHQIIRDHETNRSRGFGFIIFDSEEVVDEMISKGNMIDMAGTQVE 179

Query: 799  IKKAEPKKTSNPPSAPAFASDSRVRPLXXXXXXXXXXXXXXXXXXXXXXYRTP-XXXXXX 623
            IKKAEPKK SNPP APA+ S+SR R                        YRTP       
Sbjct: 180  IKKAEPKKASNPPPAPAYGSNSRARSFSDGFGGFGSSYGGFDSGFGPGPYRTPGGVGGRL 239

Query: 622  XXXXXXXXXXXXXXXXXXXXXXXGIDNYQGESPLGYSSRF 503
                                    +  Y+GES LGYSSRF
Sbjct: 240  GGYGGYGSSGSEFGGGYGGFGSSSLGGYRGESSLGYSSRF 279


>emb|CBI39777.3| unnamed protein product [Vitis vinifera]
          Length = 293

 Score =  333 bits (853), Expect = 9e-89
 Identities = 167/205 (81%), Positives = 181/205 (88%), Gaps = 4/205 (1%)
 Frame = -1

Query: 1327 MGSKTKSFDN----EKASPGKIFIGGLAKDTTLATFTNYFEKYGGITDSVIMKDRYTGHP 1160
            MGSK+KS DN    + ASPGKIFIGGLAKDTT ATF  +F KYG ITDSVIMKDRYTG P
Sbjct: 1    MGSKSKS-DNPHTGDGASPGKIFIGGLAKDTTYATFNKHFGKYGDITDSVIMKDRYTGQP 59

Query: 1159 RGFGFITYADPSVVDIVIEETHVINGKQVEIKRTIPKGSSQSKDFKTKKIFVGGVPTTVT 980
            RGFGFITYADPSVVD VIE+THVINGKQVEIKRTIPKGS QSKDFKTKKIFVGGVP+TVT
Sbjct: 60   RGFGFITYADPSVVDRVIEDTHVINGKQVEIKRTIPKGSGQSKDFKTKKIFVGGVPSTVT 119

Query: 979  EDEFKNFFSKYGNVAEHQIIRDHTTNRSRGFGFIVYDNEQVVDDILVNGNMIDMDGTQVE 800
            EDEFKNFFSKYG V EHQIIRDH TNRSRGFGFI++D+E+VVD+++  GNMIDM GTQVE
Sbjct: 120  EDEFKNFFSKYGKVVEHQIIRDHETNRSRGFGFIIFDSEEVVDEMISKGNMIDMAGTQVE 179

Query: 799  IKKAEPKKTSNPPSAPAFASDSRVR 725
            IKKAEPKK SNPP APA+ S+SR R
Sbjct: 180  IKKAEPKKASNPPPAPAYGSNSRAR 204


>ref|XP_003542187.1| PREDICTED: DAZ-associated protein 1-like [Glycine max]
          Length = 352

 Score =  325 bits (834), Expect = 1e-86
 Identities = 160/201 (79%), Positives = 177/201 (88%), Gaps = 4/201 (1%)
 Frame = -1

Query: 1315 TKSFDN----EKASPGKIFIGGLAKDTTLATFTNYFEKYGGITDSVIMKDRYTGHPRGFG 1148
            ++ FDN    + ASPGKIFIGGLAKDTTL TF  YFEKYG ITDSVIMKDR+TG PRGFG
Sbjct: 3    SRKFDNPHSGDGASPGKIFIGGLAKDTTLETFVKYFEKYGEITDSVIMKDRHTGRPRGFG 62

Query: 1147 FITYADPSVVDIVIEETHVINGKQVEIKRTIPKGSSQSKDFKTKKIFVGGVPTTVTEDEF 968
            FITYADPSVVD VI+E HV+NGKQVEIKRTIPKGSSQ+ DFKTKKIFVGG+PT+V+EDE 
Sbjct: 63   FITYADPSVVDQVIQENHVVNGKQVEIKRTIPKGSSQANDFKTKKIFVGGIPTSVSEDEL 122

Query: 967  KNFFSKYGNVAEHQIIRDHTTNRSRGFGFIVYDNEQVVDDILVNGNMIDMDGTQVEIKKA 788
            KNFFSKYG V EH+IIRDHTT RSRGFGFIV+D+E+VVD+IL +GNMIDM GTQVEIKKA
Sbjct: 123  KNFFSKYGKVVEHEIIRDHTTKRSRGFGFIVFDSEKVVDNILADGNMIDMGGTQVEIKKA 182

Query: 787  EPKKTSNPPSAPAFASDSRVR 725
            EPKK+SNP S P FASDSR R
Sbjct: 183  EPKKSSNPASLPPFASDSRAR 203


>emb|CBI18525.3| unnamed protein product [Vitis vinifera]
          Length = 242

 Score =  324 bits (831), Expect = 3e-86
 Identities = 161/204 (78%), Positives = 176/204 (86%), Gaps = 3/204 (1%)
 Frame = -1

Query: 1327 MGSKTK---SFDNEKASPGKIFIGGLAKDTTLATFTNYFEKYGGITDSVIMKDRYTGHPR 1157
            MGSK K   +   + ASPGKIFIGGLAKDTT A F  +FEKYG ITDSVIMKDRYTG PR
Sbjct: 1    MGSKLKGNTTHTGDGASPGKIFIGGLAKDTTYAAFNKHFEKYGEITDSVIMKDRYTGQPR 60

Query: 1156 GFGFITYADPSVVDIVIEETHVINGKQVEIKRTIPKGSSQSKDFKTKKIFVGGVPTTVTE 977
            GFGF+TYADPSVVD VIE+THVINGKQVEIKRTIPKGS QSKDFKTKKIFVGG+P+TVTE
Sbjct: 61   GFGFVTYADPSVVDSVIEDTHVINGKQVEIKRTIPKGSGQSKDFKTKKIFVGGLPSTVTE 120

Query: 976  DEFKNFFSKYGNVAEHQIIRDHTTNRSRGFGFIVYDNEQVVDDILVNGNMIDMDGTQVEI 797
            DEFK+FFSKYG V EHQIIRDH TNRSRGFGFI++++E+VVD+IL  GNMIDM GTQVEI
Sbjct: 121  DEFKDFFSKYGKVEEHQIIRDHETNRSRGFGFIIFESEEVVDEILSEGNMIDMAGTQVEI 180

Query: 796  KKAEPKKTSNPPSAPAFASDSRVR 725
            KKAEPKK SNPP   AF S+SR R
Sbjct: 181  KKAEPKKASNPPHVSAFGSNSRAR 204


>ref|XP_002277226.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Vitis vinifera]
          Length = 348

 Score =  324 bits (831), Expect = 3e-86
 Identities = 161/204 (78%), Positives = 176/204 (86%), Gaps = 3/204 (1%)
 Frame = -1

Query: 1327 MGSKTK---SFDNEKASPGKIFIGGLAKDTTLATFTNYFEKYGGITDSVIMKDRYTGHPR 1157
            MGSK K   +   + ASPGKIFIGGLAKDTT A F  +FEKYG ITDSVIMKDRYTG PR
Sbjct: 1    MGSKLKGNTTHTGDGASPGKIFIGGLAKDTTYAAFNKHFEKYGEITDSVIMKDRYTGQPR 60

Query: 1156 GFGFITYADPSVVDIVIEETHVINGKQVEIKRTIPKGSSQSKDFKTKKIFVGGVPTTVTE 977
            GFGF+TYADPSVVD VIE+THVINGKQVEIKRTIPKGS QSKDFKTKKIFVGG+P+TVTE
Sbjct: 61   GFGFVTYADPSVVDSVIEDTHVINGKQVEIKRTIPKGSGQSKDFKTKKIFVGGLPSTVTE 120

Query: 976  DEFKNFFSKYGNVAEHQIIRDHTTNRSRGFGFIVYDNEQVVDDILVNGNMIDMDGTQVEI 797
            DEFK+FFSKYG V EHQIIRDH TNRSRGFGFI++++E+VVD+IL  GNMIDM GTQVEI
Sbjct: 121  DEFKDFFSKYGKVEEHQIIRDHETNRSRGFGFIIFESEEVVDEILSEGNMIDMAGTQVEI 180

Query: 796  KKAEPKKTSNPPSAPAFASDSRVR 725
            KKAEPKK SNPP   AF S+SR R
Sbjct: 181  KKAEPKKASNPPHVSAFGSNSRAR 204


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