BLASTX nr result

ID: Coptis23_contig00009197 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009197
         (1006 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282520.1| PREDICTED: uncharacterized protein LOC100261...   414   e-113
ref|XP_002309428.1| hypothetical protein POPTRDRAFT_416266 [Popu...   399   e-109
ref|XP_004149203.1| PREDICTED: uncharacterized protein LOC101204...   390   e-106
ref|XP_002528757.1| conserved hypothetical protein [Ricinus comm...   377   e-102
ref|XP_002873122.1| hypothetical protein ARALYDRAFT_487166 [Arab...   374   e-101

>ref|XP_002282520.1| PREDICTED: uncharacterized protein LOC100261348 [Vitis vinifera]
           gi|297740119|emb|CBI30301.3| unnamed protein product
           [Vitis vinifera]
          Length = 333

 Score =  414 bits (1063), Expect = e-113
 Identities = 204/267 (76%), Positives = 212/267 (79%)
 Frame = +3

Query: 69  KRFAIRPDKXXXXXXXXXXXXFRLGTGVFVSGYSASFVSGSEIPSDEYAFEIAGFKVKET 248
           K F+IRPDK             RLGTGVFVSGYSASFVS SEIP DEY  EIAGFKVKET
Sbjct: 66  KPFSIRPDKVFDILGASLALILRLGTGVFVSGYSASFVSESEIPPDEYILEIAGFKVKET 125

Query: 249 SKLGPRPEKPIEIYEFESCPFCRKVREIVAVLDLDVLYYPCPRNGPNFRPKVVQMGGKQQ 428
           SK+GPRPEKPIEIYEFESCPFCRKVREIVAVLDLDVL+YPCPRNGPNFRPKV QMGGKQQ
Sbjct: 126 SKVGPRPEKPIEIYEFESCPFCRKVREIVAVLDLDVLFYPCPRNGPNFRPKVAQMGGKQQ 185

Query: 429 FPYMVDPNTGVAMYESDSIINYLVGKYGDGTVPXXXXXXXXXXXXEGFAMIGRMGKGSSY 608
           FPYMVDPNTGVAMYESD II YLVGKYGDG VP            EGFAMIGRMGKGSSY
Sbjct: 186 FPYMVDPNTGVAMYESDDIIKYLVGKYGDGNVPFMLSLGLLTTLTEGFAMIGRMGKGSSY 245

Query: 609 IPSKLPPEPVELWAYEASPFCKXXXXXXXXXXXXXXXHSCARGSPKRQILYQTAGHFQVP 788
            PSKLPP+P+ELWAYEASPFCK                SCARGSPKRQ+LYQ A HFQ P
Sbjct: 246 TPSKLPPKPLELWAYEASPFCKVVREVIVELELPHILRSCARGSPKRQLLYQKARHFQAP 305

Query: 789 YLEDPNTGVKMFESAEIVDYLRATYGL 869
           YLEDPNTGVKMFESAEIV+YL+ATY L
Sbjct: 306 YLEDPNTGVKMFESAEIVEYLKATYAL 332


>ref|XP_002309428.1| hypothetical protein POPTRDRAFT_416266 [Populus trichocarpa]
           gi|222855404|gb|EEE92951.1| hypothetical protein
           POPTRDRAFT_416266 [Populus trichocarpa]
          Length = 287

 Score =  399 bits (1025), Expect = e-109
 Identities = 190/265 (71%), Positives = 208/265 (78%)
 Frame = +3

Query: 69  KRFAIRPDKXXXXXXXXXXXXFRLGTGVFVSGYSASFVSGSEIPSDEYAFEIAGFKVKET 248
           KRFA+RPDK            FRLGTGVFV+GYS SFVS   IP D+Y+ E+AG+KVKET
Sbjct: 22  KRFAVRPDKTWDIIGASLALIFRLGTGVFVNGYSVSFVSKDAIPPDQYSLEVAGYKVKET 81

Query: 249 SKLGPRPEKPIEIYEFESCPFCRKVREIVAVLDLDVLYYPCPRNGPNFRPKVVQMGGKQQ 428
           SKLGPRPEKPIEIYEFE CPFCRKVREIVAVLDLDVL+YPCP+NGPNFRPKV QMGGKQQ
Sbjct: 82  SKLGPRPEKPIEIYEFEGCPFCRKVREIVAVLDLDVLFYPCPKNGPNFRPKVAQMGGKQQ 141

Query: 429 FPYMVDPNTGVAMYESDSIINYLVGKYGDGTVPXXXXXXXXXXXXEGFAMIGRMGKGSSY 608
           FPYMVDPNTG AMYESD II YLV KYGDG++P            EGFAMIGRMGKGSSY
Sbjct: 142 FPYMVDPNTGTAMYESDDIIKYLVQKYGDGSIPFTLSLGLLTTLTEGFAMIGRMGKGSSY 201

Query: 609 IPSKLPPEPVELWAYEASPFCKXXXXXXXXXXXXXXXHSCARGSPKRQILYQTAGHFQVP 788
            PSKLPP+P+ELWAYE SPFCK                SCARGSPKRQIL++ AGHFQ P
Sbjct: 202 TPSKLPPKPLELWAYEGSPFCKIVREVLVELELPHIFRSCARGSPKRQILFEKAGHFQAP 261

Query: 789 YLEDPNTGVKMFESAEIVDYLRATY 863
           Y+EDPNTGV+MFESAEIV+YL+ TY
Sbjct: 262 YIEDPNTGVQMFESAEIVEYLKVTY 286



 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
 Frame = +3

Query: 624 PPEPVELWAYEASPFCKXXXXXXXXXXXXXXXHSCARGSPK-RQILYQTAGHFQVPYLED 800
           P +P+E++ +E  PFC+               + C +  P  R  + Q  G  Q PY+ D
Sbjct: 88  PEKPIEIYEFEGCPFCRKVREIVAVLDLDVLFYPCPKNGPNFRPKVAQMGGKQQFPYMVD 147

Query: 801 PNTGVKMFESAEIVDYLRATYG 866
           PNTG  M+ES +I+ YL   YG
Sbjct: 148 PNTGTAMYESDDIIKYLVQKYG 169


>ref|XP_004149203.1| PREDICTED: uncharacterized protein LOC101204318 [Cucumis sativus]
           gi|449500909|ref|XP_004161227.1| PREDICTED:
           uncharacterized LOC101204318 [Cucumis sativus]
          Length = 338

 Score =  390 bits (1002), Expect = e-106
 Identities = 187/267 (70%), Positives = 206/267 (77%)
 Frame = +3

Query: 69  KRFAIRPDKXXXXXXXXXXXXFRLGTGVFVSGYSASFVSGSEIPSDEYAFEIAGFKVKET 248
           KRF +RPDK            FRLGTG+FV+GYSAS V  ++ P D+YA EIAGFKVKET
Sbjct: 72  KRFGVRPDKFLDVLGASLSLVFRLGTGIFVNGYSASLVPKNDFPPDKYALEIAGFKVKET 131

Query: 249 SKLGPRPEKPIEIYEFESCPFCRKVREIVAVLDLDVLYYPCPRNGPNFRPKVVQMGGKQQ 428
           SKLGPRPEKPIEIYEFESCPFCRKVREIVAVLDLD+L+YPCPRNGPNFRPKV+QMGGKQQ
Sbjct: 132 SKLGPRPEKPIEIYEFESCPFCRKVREIVAVLDLDILFYPCPRNGPNFRPKVLQMGGKQQ 191

Query: 429 FPYMVDPNTGVAMYESDSIINYLVGKYGDGTVPXXXXXXXXXXXXEGFAMIGRMGKGSSY 608
           FPYMVDPNTGV+MYESD II YLV  YGDG VP            EGFAMIGR+G+GS Y
Sbjct: 192 FPYMVDPNTGVSMYESDDIIKYLVQNYGDGNVPLFLSLGLLTTLSEGFAMIGRLGRGSIY 251

Query: 609 IPSKLPPEPVELWAYEASPFCKXXXXXXXXXXXXXXXHSCARGSPKRQILYQTAGHFQVP 788
            PSKLPP P+E+WAYE SPFCK                 CARGSPKRQ LY+  GHFQVP
Sbjct: 252 KPSKLPPAPLEIWAYEGSPFCKLVREVLVELELPHLVRCCARGSPKRQQLYEKEGHFQVP 311

Query: 789 YLEDPNTGVKMFESAEIVDYLRATYGL 869
           YL+DPNTGV+MFESAEIV+YL+ATY L
Sbjct: 312 YLDDPNTGVRMFESAEIVEYLQATYAL 338


>ref|XP_002528757.1| conserved hypothetical protein [Ricinus communis]
           gi|223531851|gb|EEF33669.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 344

 Score =  377 bits (967), Expect = e-102
 Identities = 185/270 (68%), Positives = 205/270 (75%), Gaps = 5/270 (1%)
 Frame = +3

Query: 75  FAIRPDKXXXXXXXXXXXXFRLGTGVFVSGYSASFVSGSEIPSDEYAFEIAGFKVKETSK 254
           F ++P K            FRLGTGVFVSGYSASFVS  EIP D+YA   AG+KVKETSK
Sbjct: 74  FTVKPGKTLDILGASLALLFRLGTGVFVSGYSASFVSKDEIPPDQYALGAAGYKVKETSK 133

Query: 255 LGPRPEKPIEIYEFESCPFCRKVREIVAVLDLDVLYYPCPRNGPNFRPKVVQMGGKQQFP 434
           LGPRPEKPIEIYEFESCPFCRKVREIVAVLD+DVL+YPCP++GP FRPK +Q+GGK+QFP
Sbjct: 134 LGPRPEKPIEIYEFESCPFCRKVREIVAVLDIDVLFYPCPKDGPTFRPKAIQLGGKRQFP 193

Query: 435 YMVDPNTGVAMYESDSIINYLVGKYGDGTVPXXXXXXXXXXXXEGFAMIGRMGKGSSYIP 614
           YMVDPNTG AMYESD II YLVGKYGDG VP             GFAMIGR GKGSSY P
Sbjct: 194 YMVDPNTGTAMYESDDIIKYLVGKYGDGNVPLMLSLGLFTTLTAGFAMIGRAGKGSSYTP 253

Query: 615 SKLPPEPVELWAYEASPFCK-----XXXXXXXXXXXXXXXHSCARGSPKRQILYQTAGHF 779
           S+LPP+P+E+W+YE SPFCK                      CARGSPKRQ LY+ AGHF
Sbjct: 254 SRLPPKPLEIWSYEGSPFCKIVRETLVELELPHIXXLRMRSFCARGSPKRQTLYEKAGHF 313

Query: 780 QVPYLEDPNTGVKMFESAEIVDYLRATYGL 869
           QVPYLEDPNTGV+MFESA+IV+YLRATY L
Sbjct: 314 QVPYLEDPNTGVQMFESADIVEYLRATYAL 343


>ref|XP_002873122.1| hypothetical protein ARALYDRAFT_487166 [Arabidopsis lyrata subsp.
           lyrata] gi|297318959|gb|EFH49381.1| hypothetical protein
           ARALYDRAFT_487166 [Arabidopsis lyrata subsp. lyrata]
          Length = 336

 Score =  374 bits (961), Expect = e-101
 Identities = 180/265 (67%), Positives = 198/265 (74%)
 Frame = +3

Query: 69  KRFAIRPDKXXXXXXXXXXXXFRLGTGVFVSGYSASFVSGSEIPSDEYAFEIAGFKVKET 248
           KRFA++  K            FR GTGVFVSGYSASFVS  EIP+D+YA  + G  VKET
Sbjct: 70  KRFAVKSGKLFDVFGAAIGLFFRFGTGVFVSGYSASFVSKEEIPADQYALRLGGITVKET 129

Query: 249 SKLGPRPEKPIEIYEFESCPFCRKVREIVAVLDLDVLYYPCPRNGPNFRPKVVQMGGKQQ 428
           +K+GPRPEKPIEIYEFE CPFCRKVRE+VAVLDLD+LYYPCPR  PNFRPKV QMGGKQQ
Sbjct: 130 AKVGPRPEKPIEIYEFEGCPFCRKVREMVAVLDLDILYYPCPRGSPNFRPKVKQMGGKQQ 189

Query: 429 FPYMVDPNTGVAMYESDSIINYLVGKYGDGTVPXXXXXXXXXXXXEGFAMIGRMGKGSSY 608
           FPYMVDPNTGV+MYESD II YL  KYGDGTVP             GFAMIGRMGKG+ Y
Sbjct: 190 FPYMVDPNTGVSMYESDGIIKYLSEKYGDGTVPLSLSLGALTAITAGFAMIGRMGKGNLY 249

Query: 609 IPSKLPPEPVELWAYEASPFCKXXXXXXXXXXXXXXXHSCARGSPKRQILYQTAGHFQVP 788
            P+KLPP+P+E WAYE SPFCK                SCARGSPKRQ+L + AGHFQVP
Sbjct: 250 TPAKLPPKPLEFWAYEGSPFCKLVREVLVELELPHIQRSCARGSPKRQVLLEKAGHFQVP 309

Query: 789 YLEDPNTGVKMFESAEIVDYLRATY 863
           YLEDPNTGV MFESAEIV+YL+ TY
Sbjct: 310 YLEDPNTGVAMFESAEIVEYLKQTY 334



 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 32/82 (39%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
 Frame = +3

Query: 624 PPEPVELWAYEASPFCKXXXXXXXXXXXXXXXHSCARGSPK-RQILYQTAGHFQVPYLED 800
           P +P+E++ +E  PFC+               + C RGSP  R  + Q  G  Q PY+ D
Sbjct: 136 PEKPIEIYEFEGCPFCRKVREMVAVLDLDILYYPCPRGSPNFRPKVKQMGGKQQFPYMVD 195

Query: 801 PNTGVKMFESAEIVDYLRATYG 866
           PNTGV M+ES  I+ YL   YG
Sbjct: 196 PNTGVSMYESDGIIKYLSEKYG 217


Top