BLASTX nr result

ID: Coptis23_contig00009185 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009185
         (1344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275625.1| PREDICTED: mitochondrial translocator assemb...   418   e-114
ref|XP_002528146.1| conserved hypothetical protein [Ricinus comm...   412   e-112
ref|NP_001030827.1| uncharacterized protein [Arabidopsis thalian...   402   e-109
ref|XP_002877570.1| hypothetical protein ARALYDRAFT_485127 [Arab...   396   e-108
ref|XP_004134527.1| PREDICTED: mitochondrial translocator assemb...   395   e-107

>ref|XP_002275625.1| PREDICTED: mitochondrial translocator assembly and maintenance
            protein 41 homolog [Vitis vinifera]
            gi|297738029|emb|CBI27230.3| unnamed protein product
            [Vitis vinifera]
          Length = 332

 Score =  418 bits (1075), Expect = e-114
 Identities = 213/324 (65%), Positives = 248/324 (76%), Gaps = 1/324 (0%)
 Frame = +2

Query: 98   LADFLDDLPPVEFCCTYGSSLL-NNRDKTTMVDYILGVSDPMQWHTKNLELNSDHYASLI 274
            LA  L  LPPVEFCC YGS+L  NN +K+TMVDYILGVSDPMQWH++NL++N DHYAS +
Sbjct: 9    LASLLKFLPPVEFCCVYGSALHPNNYNKSTMVDYILGVSDPMQWHSQNLKMNRDHYASSM 68

Query: 275  VRLGGAKLITRVADVIGVGVHFNPFVECDDKMIKYGVVRMHDLVQDIFSWEHFYLSGRLQ 454
            V LGGAKLIT+VAD IGVGVHFNPFV  +D+M KYGVVRMHDLV+D+ +WE FYLSGRLQ
Sbjct: 69   VYLGGAKLITQVADEIGVGVHFNPFVSVNDEMFKYGVVRMHDLVEDVLNWETFYLSGRLQ 128

Query: 455  KPVNVLKDNLDIENINXXXXXXXXXXXXXXXPPKFTEAELYAKICSLSYMGDLRMLFAED 634
            KPV VL DNLDI N+N               P KFTE  LYAKICSLSYMGDLRMLFAED
Sbjct: 129  KPVQVLVDNLDIGNLNSVNLKGAISAALLLLPAKFTEEHLYAKICSLSYMGDLRMLFAED 188

Query: 635  KNKVNKIVEGQFPLFRKMYKPFIEEYAAKDLLRYPAYVRHFGNIVQDCGLPATSILVSSL 814
            +NKV KIV+ QF LF+ MYKP +EEY AK LLR+ +   H   I QDCGL     LVSSL
Sbjct: 189  RNKVKKIVQVQFDLFQTMYKPLLEEYGAKGLLRFSSSDGHQAIISQDCGLSVARSLVSSL 248

Query: 815  PSNVKKRMGMKSGEKINHSQSGRAIYEVAIASREEAASCMQKVLRRIVLVSSTRQAISGV 994
            PS V+ +MGMK GEK   S+SGR + EV + SREEAA CM+ VLRR V+VSS RQA+SG+
Sbjct: 249  PSKVRSQMGMKLGEKTKLSESGRVLREVVVGSREEAAECMRGVLRRKVMVSSARQAVSGL 308

Query: 995  LAAGGVHAVQYLSNKMSKWWKS*T 1066
            +A GGV+A++YL+NKM K WKS T
Sbjct: 309  VAVGGVNAIRYLANKMEKAWKSWT 332


>ref|XP_002528146.1| conserved hypothetical protein [Ricinus communis]
            gi|223532444|gb|EEF34237.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 329

 Score =  412 bits (1058), Expect = e-112
 Identities = 207/322 (64%), Positives = 251/322 (77%), Gaps = 1/322 (0%)
 Frame = +2

Query: 98   LADFLDDLPPVEFCCTYGSSLL-NNRDKTTMVDYILGVSDPMQWHTKNLELNSDHYASLI 274
            L +FL+ LP VEFCC YGS+L  NN+DK++MVD+ILGVSDP QWH++NL+LN DHYAS +
Sbjct: 9    LKNFLEVLPSVEFCCVYGSALHPNNQDKSSMVDFILGVSDPRQWHSENLKLNRDHYASWM 68

Query: 275  VRLGGAKLITRVADVIGVGVHFNPFVECDDKMIKYGVVRMHDLVQDIFSWEHFYLSGRLQ 454
            V LGGAKLIT VAD IGVGVHFNPF+  +DKM+KYGVVRMHDLVQDI +WE FYLSGRLQ
Sbjct: 69   VHLGGAKLITEVADEIGVGVHFNPFITWNDKMLKYGVVRMHDLVQDILNWERFYLSGRLQ 128

Query: 455  KPVNVLKDNLDIENINXXXXXXXXXXXXXXXPPKFTEAELYAKICSLSYMGDLRMLFAED 634
            KPV++L DNLDI N+N               P KFTE +LY+KICSLSYMGDLRMLFAED
Sbjct: 129  KPVHILVDNLDIGNVNSANLRAALSAALLLLPSKFTEEDLYSKICSLSYMGDLRMLFAED 188

Query: 635  KNKVNKIVEGQFPLFRKMYKPFIEEYAAKDLLRYPAYVRHFGNIVQDCGLPATSILVSSL 814
            KNKV KIV+GQF LF  MY+P +++Y AK+LLR+ +   +  NI QDCGL  T  LV +L
Sbjct: 189  KNKVKKIVQGQFGLFHSMYRPILQDYEAKELLRFSS-SDYQSNISQDCGLSVTRSLVRAL 247

Query: 815  PSNVKKRMGMKSGEKINHSQSGRAIYEVAIASREEAASCMQKVLRRIVLVSSTRQAISGV 994
            P  V+ +MGMK GE+   S SGR ++EV I SREEAA CM KVLRR V++SS RQAISG+
Sbjct: 248  PPLVRSKMGMKLGEEKLWSDSGRFLHEVIIGSREEAAKCMHKVLRRTVMISSARQAISGL 307

Query: 995  LAAGGVHAVQYLSNKMSKWWKS 1060
            LAAGG++A +YL++K+ K WKS
Sbjct: 308  LAAGGINATRYLASKVCKAWKS 329


>ref|NP_001030827.1| uncharacterized protein [Arabidopsis thaliana]
            gi|6522546|emb|CAB61989.1| putative protein [Arabidopsis
            thaliana] gi|44681360|gb|AAS47620.1| At3g47630
            [Arabidopsis thaliana] gi|56381935|gb|AAV85686.1|
            At3g47630 [Arabidopsis thaliana]
            gi|110738628|dbj|BAF01239.1| hypothetical protein
            [Arabidopsis thaliana] gi|332644789|gb|AEE78310.1|
            uncharacterized protein [Arabidopsis thaliana]
          Length = 332

 Score =  402 bits (1032), Expect = e-109
 Identities = 202/322 (62%), Positives = 245/322 (76%), Gaps = 1/322 (0%)
 Frame = +2

Query: 98   LADFLDDLPPVEFCCTYGSSLL-NNRDKTTMVDYILGVSDPMQWHTKNLELNSDHYASLI 274
            L+ FL  LPPV+FCC YGS+L  NN+DK+ MVDYILGVSDP++WH+ NL++NSDHYAS +
Sbjct: 9    LSSFLSVLPPVDFCCVYGSTLHPNNQDKSKMVDYILGVSDPIKWHSANLKMNSDHYASWM 68

Query: 275  VRLGGAKLITRVADVIGVGVHFNPFVECDDKMIKYGVVRMHDLVQDIFSWEHFYLSGRLQ 454
            V LGGA+LIT VAD +GVGVHFNPFV  +D+ +KYGVVRMHDLVQDI  W+ FYLSGRLQ
Sbjct: 69   VHLGGARLITNVADKVGVGVHFNPFVNWNDRKLKYGVVRMHDLVQDILDWKRFYLSGRLQ 128

Query: 455  KPVNVLKDNLDIENINXXXXXXXXXXXXXXXPPKFTEAELYAKICSLSYMGDLRMLFAED 634
            KPV++L DNLDIE++N               P KFTE +LYAKICSLSYMGDLRM FAED
Sbjct: 129  KPVHMLVDNLDIEDVNSVNKRAAISAALLLLPSKFTEEDLYAKICSLSYMGDLRMFFAED 188

Query: 635  KNKVNKIVEGQFPLFRKMYKPFIEEYAAKDLLRYPAYVRHFGNIVQDCGLPATSILVSSL 814
             NKVNKIV+GQF LF+ MYKPF+EE   K+LLR+ +       +VQD  L AT  LVSSL
Sbjct: 189  TNKVNKIVKGQFDLFQSMYKPFLEECETKNLLRFSSAEASHTKLVQDSSLSATRSLVSSL 248

Query: 815  PSNVKKRMGMKSGEKINHSQSGRAIYEVAIASREEAASCMQKVLRRIVLVSSTRQAISGV 994
            P++V+ +MG   GEK   S++GR + EV I+SREEAA CM+KV+RR V+VSS RQA+SG 
Sbjct: 249  PASVRSQMGKSLGEKKFVSETGRVMGEVCISSREEAAKCMEKVMRRRVMVSSGRQAVSGF 308

Query: 995  LAAGGVHAVQYLSNKMSKWWKS 1060
            LAAG ++A  YLS KM K W S
Sbjct: 309  LAAGAINATMYLSQKMRKAWNS 330


>ref|XP_002877570.1| hypothetical protein ARALYDRAFT_485127 [Arabidopsis lyrata subsp.
            lyrata] gi|297323408|gb|EFH53829.1| hypothetical protein
            ARALYDRAFT_485127 [Arabidopsis lyrata subsp. lyrata]
          Length = 332

 Score =  396 bits (1017), Expect = e-108
 Identities = 201/322 (62%), Positives = 240/322 (74%), Gaps = 1/322 (0%)
 Frame = +2

Query: 98   LADFLDDLPPVEFCCTYGSSLL-NNRDKTTMVDYILGVSDPMQWHTKNLELNSDHYASLI 274
            L+ FL  LPPV+FCC YGS+L  NN+DK+ MVDYILGVSDPM+WH+ NL++NSDHYAS +
Sbjct: 9    LSSFLGVLPPVDFCCVYGSTLHPNNQDKSKMVDYILGVSDPMKWHSLNLKMNSDHYASWM 68

Query: 275  VRLGGAKLITRVADVIGVGVHFNPFVECDDKMIKYGVVRMHDLVQDIFSWEHFYLSGRLQ 454
            V LGGA+LIT VAD +GVGVHFNPFV  +D+ +KYGVVRMHDLVQDI  W  FYLSGRLQ
Sbjct: 69   VHLGGARLITNVADKVGVGVHFNPFVNWNDRKLKYGVVRMHDLVQDILDWNRFYLSGRLQ 128

Query: 455  KPVNVLKDNLDIENINXXXXXXXXXXXXXXXPPKFTEAELYAKICSLSYMGDLRMLFAED 634
            KPV++L DNLDIE++N               P KFTE +LYAKICSLSYMGDLRM FAED
Sbjct: 129  KPVHMLVDNLDIEDVNSVNKRAAVSAALLLLPSKFTEEDLYAKICSLSYMGDLRMFFAED 188

Query: 635  KNKVNKIVEGQFPLFRKMYKPFIEEYAAKDLLRYPAYVRHFGNIVQDCGLPATSILVSSL 814
             NKVNKIV+GQF +F+ MYKPFIEE   K+LLR+ +       +VQD  L AT  LV SL
Sbjct: 189  TNKVNKIVKGQFDIFQSMYKPFIEECETKNLLRFSSAEASHTKLVQDSSLSATRSLVYSL 248

Query: 815  PSNVKKRMGMKSGEKINHSQSGRAIYEVAIASREEAASCMQKVLRRIVLVSSTRQAISGV 994
            P++V+  MG   GEK   S++GR + EV IASREEAA CM  V++R V+VSS RQA+SG 
Sbjct: 249  PTSVRSLMGKSLGEKKFVSETGRVMGEVCIASREEAAKCMGNVMKRRVMVSSARQAVSGF 308

Query: 995  LAAGGVHAVQYLSNKMSKWWKS 1060
            LAAG ++A  YLS KM K W S
Sbjct: 309  LAAGAINATMYLSQKMRKAWNS 330


>ref|XP_004134527.1| PREDICTED: mitochondrial translocator assembly and maintenance
            protein 41 homolog [Cucumis sativus]
          Length = 334

 Score =  395 bits (1015), Expect = e-107
 Identities = 200/327 (61%), Positives = 241/327 (73%), Gaps = 3/327 (0%)
 Frame = +2

Query: 89   NLGLADFLDDLPPVEFCCTYGSSLL-NNRDKTTMVDYILGVSDPMQWHTKNLELNSDHYA 265
            N  L  FL +LPPVEFCC YGS+L  NN DK+ MVD ILGVSDP +WH KN+ LN DHYA
Sbjct: 6    NTELIAFLKELPPVEFCCIYGSTLHPNNHDKSKMVDLILGVSDPQKWHEKNIRLNKDHYA 65

Query: 266  SLIVRLGGAKLITRVADVIGVGVHFNPFVECDDKMIKYGVVRMHDLVQDIFSWEHFYLSG 445
            S +V LGG KL+T+VAD IGVGVHFNP+V  +DKM+KYGV RMHDL+QDI  W+ FYLSG
Sbjct: 66   SWMVYLGGGKLVTKVADAIGVGVHFNPYVMWNDKMLKYGVARMHDLIQDIQYWKTFYLSG 125

Query: 446  RLQKPVNVLKDNLDIENINXXXXXXXXXXXXXXXPPKFTEAELYAKICSLSYMGDLRMLF 625
            RLQKPVN+L D+LD++ +N               PPKFTE +LYAKICSLSYMGDLRMLF
Sbjct: 126  RLQKPVNILVDSLDVQQLNSVNLRSAVSAALLLLPPKFTEVDLYAKICSLSYMGDLRMLF 185

Query: 626  AEDKNKVNKIVEGQFPLFRKMYKPFIEEYAAKDLLRYPAYVRHFGNIVQDCGLPATSILV 805
            AED++KVNKIV GQFPLF+ MY+P +E+Y  K+LL++        NI QDCGL AT  LV
Sbjct: 186  AEDRDKVNKIVRGQFPLFQSMYRPCLEQYKTKELLQFSPRGDDQANISQDCGLSATEYLV 245

Query: 806  SSLPSNVKKRMGMKSGEKINHSQSGRAI--YEVAIASREEAASCMQKVLRRIVLVSSTRQ 979
            SSLP+ V   +G++ GEK + S  GR     +V I SR+E A CMQ+VLRR V+VSS RQ
Sbjct: 246  SSLPTTVWNTLGLRLGEKRSLSGPGRVTGRNQVLIQSRKEVADCMQRVLRRKVMVSSARQ 305

Query: 980  AISGVLAAGGVHAVQYLSNKMSKWWKS 1060
            A+SGVLA GGV A +YL +KM K W+S
Sbjct: 306  AVSGVLAVGGVKAAKYLGSKMCKAWRS 332


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