BLASTX nr result

ID: Coptis23_contig00009175 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009175
         (479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270114.1| PREDICTED: uncharacterized protein LOC100256...    70   2e-10
ref|XP_002316817.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07
ref|XP_002522235.1| conserved hypothetical protein [Ricinus comm...    57   2e-06

>ref|XP_002270114.1| PREDICTED: uncharacterized protein LOC100256599 [Vitis vinifera]
           gi|297740528|emb|CBI30710.3| unnamed protein product
           [Vitis vinifera]
          Length = 262

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 50/130 (38%), Positives = 66/130 (50%), Gaps = 2/130 (1%)
 Frame = +3

Query: 96  KFQKSLLNLTEITDGAPSFASRP--VHPTFWSVRCEGNNRKGHPRRSSTSGGSHKPXXXX 269
           K  K  ++L E  DG   FASR   +  T  S++ +GN R   PR++  SG + K     
Sbjct: 24  KLGKYAVSLQETADGFSPFASRRDLLPLTISSIKSDGNRRGRPPRKNHISGRTEK-GDKN 82

Query: 270 XXXXXXXXXXXXXXXXXXXXALFRRIQSSIAKDGSGSTKKRSFVNNKKMESAESVLDVLR 449
                               ALFRRIQSSI+K  S  TKKR   ++    SAESVL++LR
Sbjct: 83  KTPPSSDGKLSESSNQDEIIALFRRIQSSISKGESLGTKKRISDSSVDKTSAESVLEILR 142

Query: 450 QSRNQIRGNP 479
           QSR Q++G P
Sbjct: 143 QSRKQVKGRP 152


>ref|XP_002316817.1| predicted protein [Populus trichocarpa] gi|222859882|gb|EEE97429.1|
           predicted protein [Populus trichocarpa]
          Length = 264

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 45/137 (32%), Positives = 66/137 (48%), Gaps = 6/137 (4%)
 Frame = +3

Query: 81  QPPIIKFQKSL----LNLTEITDGAPSFASRP--VHPTFWSVRCEGNNRKGHPRRSSTSG 242
           +P  I F K L    LNL EI DG+ +FAS    +  +  S++ +G++ KG P R S++ 
Sbjct: 16  KPSCISFSKQLKLCLLNLPEIADGSLAFASHNGVLQFSVSSIKSDGSS-KGRPPRKSSAP 74

Query: 243 GSHKPXXXXXXXXXXXXXXXXXXXXXXXXALFRRIQSSIAKDGSGSTKKRSFVNNKKMES 422
           G  +                         ALFRRIQSSI+K  S +TKK+    + +   
Sbjct: 75  GRTEKEDEDSKSQSSDRKQPMSSNQAEIMALFRRIQSSISKGESTATKKKKASRSNENSP 134

Query: 423 AESVLDVLRQSRNQIRG 473
             S+L+VLR S    +G
Sbjct: 135 TNSILEVLRHSTKHAKG 151


>ref|XP_002522235.1| conserved hypothetical protein [Ricinus communis]
           gi|223538488|gb|EEF40093.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 289

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 40/123 (32%), Positives = 59/123 (47%), Gaps = 2/123 (1%)
 Frame = +3

Query: 111 LLNLTEITDGAPSFA--SRPVHPTFWSVRCEGNNRKGHPRRSSTSGGSHKPXXXXXXXXX 284
           LLNL EI DG  +F+   R +  +  + + +G+ R   PR+SS S G  K          
Sbjct: 56  LLNLAEIADGPSTFSWQKRVLQLSISNTKSDGSRRGRSPRKSS-SPGKRKKEDKSEKYQF 114

Query: 285 XXXXXXXXXXXXXXXALFRRIQSSIAKDGSGSTKKRSFVNNKKMESAESVLDVLRQSRNQ 464
                          ALFRRI SSI+K  + ST++     ++     ES+L+ LRQSR  
Sbjct: 115 SDGKLPRSPEKDEIIALFRRIHSSISKGEAKSTQQTDINFSEDKSPTESILEALRQSRKP 174

Query: 465 IRG 473
           ++G
Sbjct: 175 VKG 177


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